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20831: Fix tests
[arvados.git]
/
sdk
/
dev-jobs.dockerfile
diff --git
a/sdk/dev-jobs.dockerfile
b/sdk/dev-jobs.dockerfile
index f7719dbc4335048663e5195edaf791caa05dee8e..95b039eba9231588b0fce92af7d6b3a369af1f24 100644
(file)
--- a/
sdk/dev-jobs.dockerfile
+++ b/
sdk/dev-jobs.dockerfile
@@
-13,8
+13,8
@@
# (This dockerfile file must be located in the arvados/sdk/ directory because
# of the docker build root.)
# (This dockerfile file must be located in the arvados/sdk/ directory because
# of the docker build root.)
-FROM debian:
9
-MAINTAINER
Peter Amstutz <peter.amstutz@curii.com
>
+FROM debian:
buster-slim
+MAINTAINER
Arvados Package Maintainers <packaging@arvados.org
>
ENV DEBIAN_FRONTEND noninteractive
ENV DEBIAN_FRONTEND noninteractive
@@
-23,25
+23,32
@@
ARG pipcmd=pip3
RUN apt-get update -q && apt-get install -qy --no-install-recommends \
git ${pythoncmd}-pip ${pythoncmd}-virtualenv ${pythoncmd}-dev libcurl4-gnutls-dev \
RUN apt-get update -q && apt-get install -qy --no-install-recommends \
git ${pythoncmd}-pip ${pythoncmd}-virtualenv ${pythoncmd}-dev libcurl4-gnutls-dev \
- libgnutls28-dev nodejs ${pythoncmd}-pyasn1-modules build-essential
-
-RUN $pipcmd install -U setuptools six requests
+ libgnutls28-dev nodejs ${pythoncmd}-pyasn1-modules build-essential ${pythoncmd}-setuptools
ARG sdk
ARG runner
ARG salad
ARG sdk
ARG runner
ARG salad
+ARG cwlutils
ARG cwltool
ADD python/dist/$sdk /tmp/
ADD cwl/salad_dist/$salad /tmp/
ADD cwl/cwltool_dist/$cwltool /tmp/
ARG cwltool
ADD python/dist/$sdk /tmp/
ADD cwl/salad_dist/$salad /tmp/
ADD cwl/cwltool_dist/$cwltool /tmp/
+ADD cwl/cwlutils_dist/$cwlutils /tmp/
ADD cwl/dist/$runner /tmp/
ADD cwl/dist/$runner /tmp/
+RUN $pipcmd install wheel
RUN cd /tmp/arvados-python-client-* && $pipcmd install .
RUN if test -d /tmp/schema-salad-* ; then cd /tmp/schema-salad-* && $pipcmd install . ; fi
RUN cd /tmp/arvados-python-client-* && $pipcmd install .
RUN if test -d /tmp/schema-salad-* ; then cd /tmp/schema-salad-* && $pipcmd install . ; fi
-RUN if test -d /tmp/cwltool-* ; then cd /tmp/cwltool-* && $pipcmd install networkx==2.2 && $pipcmd install . ; fi
+RUN if test -d /tmp/cwl-utils-* ; then cd /tmp/cwl-utils-* && $pipcmd install . ; fi
+RUN if test -d /tmp/cwltool-* ; then cd /tmp/cwltool-* && $pipcmd install . ; fi
RUN cd /tmp/arvados-cwl-runner-* && $pipcmd install .
RUN cd /tmp/arvados-cwl-runner-* && $pipcmd install .
+# Sometimes Python dependencies install successfully but don't
+# actually work. So run arvados-cwl-runner here to catch fun
+# dependency errors like pkg_resources.DistributionNotFound.
+RUN arvados-cwl-runner --version
+
# Install dependencies and set up system.
RUN /usr/sbin/adduser --disabled-password \
--gecos 'Crunch execution user' crunch && \
# Install dependencies and set up system.
RUN /usr/sbin/adduser --disabled-password \
--gecos 'Crunch execution user' crunch && \