if p.startswith("keep:") and (arvados.util.keep_locator_pattern.match(p[5:]) or
arvados.util.collection_uuid_pattern.match(p[5:])):
locator = p[5:]
- return (self.collection_cache.get(locator), urllib.parse.unquote(sp[1]) if len(sp) == 2 else None)
+ rest = os.path.normpath(urllib.parse.unquote(sp[1])) if len(sp) == 2 else None
+ return (self.collection_cache.get(locator), rest)
else:
return (None, path)
def glob(self, pattern):
collection, rest = self.get_collection(pattern)
- if collection is not None and not rest:
+ if collection is not None and rest in (None, "", "."):
return [pattern]
patternsegments = rest.split("/")
return sorted(self._match(collection, patternsegments, "keep:" + collection.manifest_locator()))
self.fsaccess = fs_access
self.num_retries = num_retries
- def fetch_text(self, url):
+ def fetch_text(self, url, content_types=None):
if url.startswith("keep:"):
with self.fsaccess.open(url, "r", encoding="utf-8") as f:
return f.read()
try:
if url.startswith("http://arvados.org/cwl"):
return True
- if url.startswith("keep:"):
- return self.fsaccess.exists(url)
- if url.startswith("arvwf:"):
- if self.fetch_text(url):
+ urld, _ = urllib.parse.urldefrag(url)
+ if urld.startswith("keep:"):
+ return self.fsaccess.exists(urld)
+ if urld.startswith("arvwf:"):
+ if self.fetch_text(urld):
return True
except arvados.errors.NotFoundError:
return False