# Do not use this file for site configuration. Create application.yml
# instead (see application.yml.example).
+# Below is a sample setting for diagnostics testing.
+# Configure workbench URL as "arvados_workbench_url"
+# Configure test user tokens as "user_tokens".
+# At this time the tests need an "active" user token.
+# Also, configure the pipelines to be executed as "pipelines_to_test".
+# For each of the pipelines identified by the name of your choice
+# ("pipeline_1" and "pipeline_2" in this sample), provide the following:
+# template_uuid: is the uuid of the template to be executed
+# input_paths: an array of inputs for the pipeline. Use either a collection's "uuid"
+# or a file's "uuid/file_name" path in this array. If the pipeline does not require
+# any inputs, this can be omitted.
+# max_wait_seconds: max time in seconds to wait for the pipeline run to complete.
+# Default value of 30 seconds is used when this value is not provided.
+diagnostics:
+ arvados_workbench_url: https://localhost:3031
+ user_tokens:
+ active: eu33jurqntstmwo05h1jr3eblmi961e802703y6657s8zb14r
+ pipelines_to_test:
+ pipeline_1:
+ template_uuid: zzzzz-p5p6p-rxj8d71854j9idn
+ input_paths: [zzzzz-4zz18-nz98douzhaa3jh2]
+ max_wait_seconds: 10
+ pipeline_2:
+ template_uuid: zzzzz-p5p6p-1xbobfobk94ppbv
+ input_paths: [zzzzz-4zz18-nz98douzhaa3jh2, zzzzz-4zz18-gpw9o5wpcti3nib]
+
+# Below is a sample setting for performance testing.
+# Configure workbench URL as "arvados_workbench_url"
+# Configure test user token as "user_token".
+performance:
+ arvados_workbench_url: https://localhost:3031
+ user_token: eu33jurqntstmwo05h1jr3eblmi961e802703y6657s8zb14r
+
development:
cache_classes: false
eager_load: true
assets.debug: true
profiling_enabled: true
site_name: Arvados Workbench (dev)
+ local_modified: "<%= '-modified' if `git status -s` != '' %>"
+
+ # API server configuration
+ arvados_login_base: ~
+ arvados_v1_base: ~
+ arvados_insecure_https: ~
production:
force_ssl: true
data_import_dir: /data/arvados-workbench-upload/data
data_export_dir: /data/arvados-workbench-download/data
+ # API server configuration
+ arvados_login_base: ~
+ arvados_v1_base: ~
+ arvados_insecure_https: ~
+
site_name: Arvados Workbench
test:
# server as a dependency. These settings should match the API
# server's Rails defaults. If you adjust those, change these
# settings in application.yml to match.
- arvados_login_base: https://localhost:3001/login
- arvados_v1_base: https://localhost:3001/arvados/v1
+ arvados_login_base: https://localhost:3000/login
+ arvados_v1_base: https://localhost:3000/arvados/v1
arvados_insecure_https: true
site_name: Workbench:test
+ # Enable user profile with one required field
+ user_profile_form_fields:
+ - key: organization
+ type: text
+ form_field_title: Institution
+ form_field_description: Your organization
+ required: true
+ - key: role
+ type: select
+ form_field_title: Your role
+ form_field_description: Choose the category that best describes your role in your organization.
+ options:
+ - Bio-informatician
+ - Computational biologist
+ - Biologist or geneticist
+ - Software developer
+ - IT
+ - Other
+
common:
assets.js_compressor: false
assets.css_compressor: false
send_user_setup_notification_email: true
# Set user_profile_form_fields to enable and configure the user profile page.
- # A commented setting with full description is provided below.
+ # Default is set to false. A commented setting with full description is provided below.
user_profile_form_fields: false
- # Below is a sample setting of user_profile_form_fields.
- # This sample configures two fields as represented by the attribute "key".
- # You can specify "type" as "text" or "select".
- # Specify "options" when using the type "select".
- # Set "required" as "true" for any of the fields to make them required.
+ # Below is a sample setting of user_profile_form_fields config parameter.
+ # This configuration parameter should be set to either false (to disable) or
+ # to an array as shown below.
+ # Configure the list of input fields to be displayed in the profile page
+ # using the attribute "key" for each of the input fields.
+ # This sample shows configuration with one required and one optional form fields.
+ # For each of these input fields:
+ # You can specify "type" as "text" or "select".
+ # List the "options" to be displayed for each of the "select" menu.
+ # Set "required" as "true" for any of these fields to make them required.
# If any of the required fields are missing in the user's profile, the user will be
- # redirected to the "/profile" page before they can access any Workbench features.
+ # redirected to the profile page before they can access any Workbench features.
#user_profile_form_fields:
# - key: organization
# type: text
# - key: role
# type: select
# form_field_title: Your role
- # form_field_description: Choose the category that best describes your role in your lab.
+ # form_field_description: Choose the category that best describes your role in your organization.
# options:
# - Bio-informatician
# - Computational biologist
# - IT
# - Other
- # email address to which mail should be sent when the user creates profile for the first time
- user_profile_notification_address: false
+ # Use "user_profile_form_message" to configure the message you want to display on
+ # the profile page.
+ user_profile_form_message: Welcome to Arvados. All <span style="color:red">required fields</span> must be completed before you can proceed.
+
+ # source_version
+ source_version: "<%= `git log -n 1 --format=%h`.strip %>"
+ local_modified: false
+
+ # report notification to and from addresses
+ issue_reporter_email_from: arvados@example.com
+ issue_reporter_email_to: arvados@example.com
+ support_email_address: arvados@example.com
+
+ # filename suffixes for which view icon would be shown in collection show page
+ filename_suffixes_with_view_icon: [txt, gif, jpeg, jpg, png, html, htm, pdf]
+
+ # the maximum number of bytes to load in the log viewer
+ log_viewer_max_bytes: 1000000
+
+ # Set anonymous user token to enable anonymous user access. You can get
+ # the token by running "bundle exec ./script/get_anonymous_user_token.rb"
+ # in the directory where you API server is running.
+ anonymous_user_token: false
projects / arvados.git / blobdiff