"encoding/json"
"fmt"
"io"
+ "io/fs"
"io/ioutil"
"math"
"net"
Insecure: true
SystemLogs:
Format: text
+ Containers:
+ CloudVMs:
+ Enable: true
+ Driver: loopback
+ BootProbeCommand: id
+ ProbeInterval: 1s
+ PollInterval: 5s
+ SyncInterval: 10s
+ TimeoutIdle: 1s
+ TimeoutBooting: 2s
+ RuntimeEngine: singularity
RemoteClusters:
z1111:
Host: ` + hostport["z1111"] + `
c.Check(err, check.ErrorMatches, `request failed: .* 401 Unauthorized: cannot use a locally issued token to forward a request to our login cluster \(z1111\)`)
c.Check(err, check.Not(check.ErrorMatches), `(?ms).*127\.0\.0\.11.*`)
}
+
+func (s *IntegrationSuite) TestRunTrivialContainer(c *check.C) {
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ _, ac1, kc1, _ := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+
+ c.Log("[docker load]")
+ out, err := exec.Command("docker", "load", "--input", arvadostest.BusyboxDockerImage(c)).CombinedOutput()
+ c.Logf("[docker load done] %s", out)
+ c.Check(err, check.IsNil)
+
+ c.Log("[arv-keepdocker]")
+ akd := exec.Command("arv-keepdocker", "--no-resume", "busybox:uclibc")
+ akd.Env = append(os.Environ(), "ARVADOS_API_HOST="+ac1.APIHost, "ARVADOS_API_HOST_INSECURE=1", "ARVADOS_API_TOKEN="+ac1.AuthToken)
+ c.Logf("[arv-keepdocker env] %q", akd.Env)
+ out, err = akd.CombinedOutput()
+ c.Logf("[arv-keepdocker done] %s", out)
+ c.Check(err, check.IsNil)
+
+ var cr arvados.ContainerRequest
+ err = ac1.RequestAndDecode(&cr, "POST", "/arvados/v1/container_requests", nil, map[string]interface{}{
+ "container_request": map[string]interface{}{
+ "command": []string{"touch", "/out/hello_world"},
+ "container_image": "busybox:uclibc",
+ "cwd": "/tmp",
+ "environment": map[string]string{},
+ "mounts": map[string]arvados.Mount{"/out": {Kind: "tmp", Capacity: 10000}},
+ "output_path": "/out",
+ "runtime_constraints": arvados.RuntimeConstraints{RAM: 100000000, VCPUs: 1},
+ "priority": 1,
+ "state": arvados.ContainerRequestStateCommitted,
+ },
+ })
+ c.Assert(err, check.IsNil)
+
+ showlogs := func(collectionID string) {
+ var logcoll arvados.Collection
+ err = ac1.RequestAndDecode(&logcoll, "GET", "/arvados/v1/collections/"+collectionID, nil, nil)
+ c.Assert(err, check.IsNil)
+ cfs, err := logcoll.FileSystem(ac1, kc1)
+ c.Assert(err, check.IsNil)
+ fs.WalkDir(arvados.FS(cfs), "/", func(path string, d fs.DirEntry, err error) error {
+ if d.IsDir() || strings.HasPrefix(path, "/log for container") {
+ return nil
+ }
+ f, err := cfs.Open(path)
+ c.Assert(err, check.IsNil)
+ defer f.Close()
+ buf, err := ioutil.ReadAll(f)
+ c.Assert(err, check.IsNil)
+ c.Logf("=== %s\n%s\n", path, buf)
+ return nil
+ })
+ }
+
+ var ctr arvados.Container
+ var lastState arvados.ContainerState
+ deadline := time.Now().Add(time.Minute)
+wait:
+ for ; ; lastState = ctr.State {
+ err = ac1.RequestAndDecode(&ctr, "GET", "/arvados/v1/containers/"+cr.ContainerUUID, nil, nil)
+ c.Assert(err, check.IsNil)
+ switch ctr.State {
+ case lastState:
+ if time.Now().After(deadline) {
+ c.Errorf("timed out, container request state is %q", cr.State)
+ showlogs(ctr.Log)
+ c.FailNow()
+ }
+ time.Sleep(time.Second / 2)
+ case arvados.ContainerStateComplete:
+ break wait
+ case arvados.ContainerStateQueued, arvados.ContainerStateLocked, arvados.ContainerStateRunning:
+ c.Logf("container state changed to %q", ctr.State)
+ default:
+ c.Errorf("unexpected container state %q", ctr.State)
+ showlogs(ctr.Log)
+ c.FailNow()
+ }
+ }
+ c.Check(ctr.ExitCode, check.Equals, 0)
+
+ err = ac1.RequestAndDecode(&cr, "GET", "/arvados/v1/container_requests/"+cr.UUID, nil, nil)
+ c.Assert(err, check.IsNil)
+
+ showlogs(cr.LogUUID)
+
+ var outcoll arvados.Collection
+ err = ac1.RequestAndDecode(&outcoll, "GET", "/arvados/v1/collections/"+cr.OutputUUID, nil, nil)
+ c.Assert(err, check.IsNil)
+ c.Check(outcoll.ManifestText, check.Matches, `\. d41d8.* 0:0:hello_world\n`)
+ c.Check(outcoll.PortableDataHash, check.Equals, "dac08d558cfb6c9536f604ca89e3c002+53")
+}