--short Skip (or scale down) some slow tests.
--interactive Set up, then prompt for test/install steps to perform.
WORKSPACE=path Arvados source tree to test.
-CONFIGSRC=path Dir with api server config files to copy into source tree.
- (If none given, leave config files alone in source tree.)
+CONFIGSRC=path Dir with config.yml file containing PostgreSQL section for use by tests.
services/api_test="TEST=test/functional/arvados/v1/collections_controller_test.rb"
Restrict apiserver tests to the given file
sdk/python_test="--test-suite tests.test_keep_locator"
lib/controller/router
lib/controller/rpc
lib/crunchstat
+lib/crunch-run
lib/cloud
lib/cloud/azure
lib/cloud/cloudtest
lib/dispatchcloud
lib/dispatchcloud/container
lib/dispatchcloud/scheduler
-lib/dispatchcloud/ssh_executor
+lib/dispatchcloud/sshexecutor
lib/dispatchcloud/worker
+lib/mount
+lib/pam
lib/service
services/api
services/arv-git-httpd
services/keepstore
services/keep-balance
services/login-sync
-services/nodemanager
-services/nodemanager_integration
-services/crunch-run
services/crunch-dispatch-local
services/crunch-dispatch-slurm
services/ws
sdk/cli
-sdk/pam
-sdk/pam:py3
sdk/python
sdk/python:py3
sdk/ruby
sdk/go/asyncbuf
sdk/go/stats
sdk/go/crunchrunner
-sdk/cwl
+sdk/cwl:py3
sdk/R
sdk/java-v2
tools/sync-groups
clear_temp() {
if [[ -z "$temp" ]]; then
- # we didn't even get as far as making a temp dir
+ # we did not even get as far as making a temp dir
:
elif [[ -z "$temp_preserve" ]]; then
+ # Go creates readonly dirs in the module cache, which cause
+ # "rm -rf" to fail unless we chmod first.
+ chmod -R u+w "$temp"
rm -rf "$temp"
else
echo "Leaving behind temp dirs in $temp"
[[ -n "${skip[sanity]}" ]] && return 0
( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
|| fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
+ [[ -z "$CONFIGSRC" ]] || [[ -s "$CONFIGSRC/config.yml" ]] \
+ || fatal "CONFIGSRC is $CONFIGSRC but '$CONFIGSRC/config.yml' is empty or not found (see: $0 --help)"
echo Checking dependencies:
echo "locale: ${LANG}"
[[ "$(locale charmap)" = "UTF-8" ]] \
|| fatal "Locale '${LANG}' is broken/missing. Try: echo ${LANG} | sudo tee -a /etc/locale.gen && sudo locale-gen"
- echo -n 'virtualenv: '
- virtualenv --version \
- || fatal "No virtualenv. Try: apt-get install virtualenv (on ubuntu: python-virtualenv)"
echo -n 'ruby: '
ruby -v \
|| fatal "No ruby. Install >=2.1.9 (using rbenv, rvm, or source)"
echo -n 'gnutls.h: '
find /usr/include -path '*gnutls/gnutls.h' | egrep --max-count=1 . \
|| fatal "No gnutls/gnutls.h. Try: apt-get install libgnutls28-dev"
- echo -n 'Python2 pyconfig.h: '
- find /usr/include -path '*/python2*/pyconfig.h' | egrep --max-count=1 . \
- || fatal "No Python2 pyconfig.h. Try: apt-get install python2.7-dev"
+ echo -n 'virtualenv: '
+ python3 -m venv -h | egrep --max-count=1 . \
+ || fatal "No virtualenv. Try: apt-get install python3-venv"
echo -n 'Python3 pyconfig.h: '
find /usr/include -path '*/python3*/pyconfig.h' | egrep --max-count=1 . \
|| fatal "No Python3 pyconfig.h. Try: apt-get install python3-dev"
echo -n 'libpq libpq-fe.h: '
find /usr/include -path '*/postgresql/libpq-fe.h' | egrep --max-count=1 . \
|| fatal "No libpq libpq-fe.h. Try: apt-get install libpq-dev"
+ echo -n 'libpam pam_appl.h: '
+ find /usr/include -path '*/security/pam_appl.h' | egrep --max-count=1 . \
+ || fatal "No libpam pam_appl.h. Try: apt-get install libpam0g-dev"
echo -n 'postgresql: '
psql --version || fatal "No postgresql. Try: apt-get install postgresql postgresql-client-common"
echo -n 'phantomjs: '
# needed for pkgdown, builds R SDK doc pages
which pandoc || fatal "No pandoc. Try: apt-get install pandoc"
fi
+ echo 'procs with /dev/fuse open:'
+ find /proc/*/fd -lname /dev/fuse 2>/dev/null | cut -d/ -f3 | xargs --no-run-if-empty ps -lywww
+ echo 'grep fuse /proc/self/mountinfo:'
+ grep fuse /proc/self/mountinfo
}
rotate_logfile() {
declare -A only
declare -A testargs
skip[apps/workbench_profile]=1
-# nodemanager_integration tests are not reliable, see #12061.
-skip[services/nodemanager_integration]=1
while [[ -n "$1" ]]
do
fi
if [[ $NEED_SDK_R == false ]]; then
- echo "R SDK not needed, it will not be installed."
+ echo "R SDK not needed, it will not be installed."
fi
checkpidfile() {
checkhealth() {
svc="$1"
- base=$(python -c "import yaml; print list(yaml.safe_load(file('$ARVADOS_CONFIG'))['Clusters']['zzzzz']['Services']['$1']['InternalURLs'].keys())[0]")
+ base=$("${VENV3DIR}/bin/python3" -c "import yaml; print(list(yaml.safe_load(open('$ARVADOS_CONFIG','r'))['Clusters']['zzzzz']['Services']['$1']['InternalURLs'].keys())[0])")
url="$base/_health/ping"
if ! curl -Ss -H "Authorization: Bearer e687950a23c3a9bceec28c6223a06c79" "${url}" | tee -a /dev/stderr | grep '"OK"'; then
echo "${url} failed"
dd="https://${1}/discovery/v1/apis/arvados/v1/rest"
if ! (set -o pipefail; curl -fsk "$dd" | grep -q ^{ ); then
echo >&2 "ERROR: could not retrieve discovery doc from RailsAPI at $dd"
- tail -v $WORKSPACE/services/api/log/test.log
+ tail -v $WORKSPACE/tmp/railsapi.log
return 1
fi
echo "${dd} ok"
if [[ -n "$ARVADOS_TEST_API_HOST" ]]; then
return 0
fi
- . "$VENVDIR/bin/activate"
+ . "$VENV3DIR/bin/activate"
echo 'Starting API, controller, keepproxy, keep-web, arv-git-httpd, ws, and nginx ssl proxy...'
if [[ ! -d "$WORKSPACE/services/api/log" ]]; then
- mkdir -p "$WORKSPACE/services/api/log"
+ mkdir -p "$WORKSPACE/services/api/log"
fi
# Remove empty api.pid file if it exists
if [[ -f "$WORKSPACE/tmp/api.pid" && ! -s "$WORKSPACE/tmp/api.pid" ]]; then
- rm -f "$WORKSPACE/tmp/api.pid"
+ rm -f "$WORKSPACE/tmp/api.pid"
fi
all_services_stopped=
fail=1
+
cd "$WORKSPACE" \
- && eval $(python sdk/python/tests/run_test_server.py start --auth admin) \
+ && eval $(python3 sdk/python/tests/run_test_server.py start --auth admin) \
&& export ARVADOS_TEST_API_HOST="$ARVADOS_API_HOST" \
&& export ARVADOS_TEST_API_INSTALLED="$$" \
&& checkpidfile api \
&& checkdiscoverydoc $ARVADOS_API_HOST \
- && eval $(python sdk/python/tests/run_test_server.py start_nginx) \
+ && eval $(python3 sdk/python/tests/run_test_server.py start_nginx) \
&& checkpidfile nginx \
- && python sdk/python/tests/run_test_server.py start_controller \
+ && python3 sdk/python/tests/run_test_server.py start_controller \
&& checkpidfile controller \
&& checkhealth Controller \
&& checkdiscoverydoc $ARVADOS_API_HOST \
- && python sdk/python/tests/run_test_server.py start_keep_proxy \
+ && python3 sdk/python/tests/run_test_server.py start_keep_proxy \
&& checkpidfile keepproxy \
- && python sdk/python/tests/run_test_server.py start_keep-web \
+ && python3 sdk/python/tests/run_test_server.py start_keep-web \
&& checkpidfile keep-web \
&& checkhealth WebDAV \
- && python sdk/python/tests/run_test_server.py start_arv-git-httpd \
+ && python3 sdk/python/tests/run_test_server.py start_arv-git-httpd \
&& checkpidfile arv-git-httpd \
&& checkhealth GitHTTP \
- && python sdk/python/tests/run_test_server.py start_ws \
+ && python3 sdk/python/tests/run_test_server.py start_ws \
&& checkpidfile ws \
&& export ARVADOS_TEST_PROXY_SERVICES=1 \
&& (env | egrep ^ARVADOS) \
return
fi
unset ARVADOS_TEST_API_HOST ARVADOS_TEST_PROXY_SERVICES
- . "$VENVDIR/bin/activate" || return
+ . "$VENV3DIR/bin/activate" || return
cd "$WORKSPACE" \
- && python sdk/python/tests/run_test_server.py stop_nginx \
- && python sdk/python/tests/run_test_server.py stop_arv-git-httpd \
- && python sdk/python/tests/run_test_server.py stop_ws \
- && python sdk/python/tests/run_test_server.py stop_keep-web \
- && python sdk/python/tests/run_test_server.py stop_keep_proxy \
- && python sdk/python/tests/run_test_server.py stop_controller \
- && python sdk/python/tests/run_test_server.py stop \
+ && python3 sdk/python/tests/run_test_server.py stop_nginx \
+ && python3 sdk/python/tests/run_test_server.py stop_arv-git-httpd \
+ && python3 sdk/python/tests/run_test_server.py stop_ws \
+ && python3 sdk/python/tests/run_test_server.py stop_keep-web \
+ && python3 sdk/python/tests/run_test_server.py stop_keep_proxy \
+ && python3 sdk/python/tests/run_test_server.py stop_controller \
+ && python3 sdk/python/tests/run_test_server.py stop \
&& all_services_stopped=1
deactivate
+ unset ARVADOS_CONFIG
}
interrupt() {
|| fatal 'rvm gemset setup'
rvm env
+ (bundle version | grep -q 2.0.2) || gem install bundler -v 2.0.2
+ bundle="$(which bundle)"
+ echo "$bundle"
+ "$bundle" version | grep 2.0.2 || fatal 'install bundler'
else
# When our "bundle install"s need to install new gems to
# satisfy dependencies, we want them to go where "gem install
tmpdir_gem_home="$(env - PATH="$PATH" HOME="$GEMHOME" gem env gempath | cut -f1 -d:)"
PATH="$tmpdir_gem_home/bin:$PATH"
- export GEM_PATH="$tmpdir_gem_home"
+ export GEM_PATH="$tmpdir_gem_home:$(gem env gempath)"
echo "Will install dependencies to $(gem env gemdir)"
- echo "Will install arvados gems to $tmpdir_gem_home"
+ echo "Will install bundler and arvados gems to $tmpdir_gem_home"
echo "Gem search path is GEM_PATH=$GEM_PATH"
+ bundle="$tmpdir_gem_home/bin/bundle"
+ (
+ export HOME=$GEMHOME
+ bundlers="$(gem list --details bundler)"
+ versions=(1.11.0 1.17.3 2.0.2)
+ for v in ${versions[@]}; do
+ if ! echo "$bundlers" | fgrep -q "($v)"; then
+ gem install --user $(for v in ${versions[@]}; do echo bundler:${v}; done)
+ break
+ fi
+ done
+ "$bundle" version | tee /dev/stderr | grep -q 'version 2'
+ ) || fatal 'install bundler'
fi
- bundle config || gem install bundler \
- || fatal 'install bundler'
}
with_test_gemset() {
setup_virtualenv() {
local venvdest="$1"; shift
- if ! [[ -e "$venvdest/bin/activate" ]] || ! [[ -e "$venvdest/bin/pip" ]]; then
- virtualenv --setuptools "$@" "$venvdest" || fatal "virtualenv $venvdest failed"
+ if ! [[ -e "$venvdest/bin/activate" ]] || ! [[ -e "$venvdest/bin/pip3" ]]; then
+ python3 -m venv "$@" "$venvdest" || fatal "virtualenv $venvdest failed"
elif [[ -n "$short" ]]; then
return
fi
- if [[ $("$venvdest/bin/python" --version 2>&1) =~ \ 3\.[012]\. ]]; then
- # pip 8.0.0 dropped support for python 3.2, e.g., debian wheezy
- "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7,<8'
- else
- "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
- fi
+ "$venvdest/bin/pip3" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
}
initialize() {
+ # If dependencies like ruby, go, etc. are installed in
+ # /var/lib/arvados -- presumably by "arvados-server install" --
+ # then we want to use those versions, instead of whatever happens
+ # to be installed in /usr.
+ PATH="/var/lib/arvados/bin:${PATH}"
sanity_checks
echo "WORKSPACE=$WORKSPACE"
- if [[ -z "$CONFIGSRC" ]] && [[ -d "$HOME/arvados-api-server" ]]; then
- # Jenkins expects us to use this by default.
- CONFIGSRC="$HOME/arvados-api-server"
- fi
-
# Clean up .pyc files that may exist in the workspace
cd "$WORKSPACE"
find -name '*.pyc' -delete
fi
# Set up temporary install dirs (unless existing dirs were supplied)
- for tmpdir in VENVDIR VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
+ for tmpdir in VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
do
if [[ -z "${!tmpdir}" ]]; then
eval "$tmpdir"="$temp/$tmpdir"
}
install_env() {
- (
- set -e
- mkdir -p "$GOPATH/src/git.curoverse.com"
- if [[ ! -h "$GOPATH/src/git.curoverse.com/arvados.git" ]]; then
- for d in \
- "$GOPATH/src/git.curoverse.com/arvados.git/tmp/GOPATH" \
- "$GOPATH/src/git.curoverse.com/arvados.git/tmp" \
- "$GOPATH/src/git.curoverse.com/arvados.git"; do
- [[ -d "$d" ]] && rmdir "$d"
- done
- fi
- for d in \
- "$GOPATH/src/git.curoverse.com/arvados.git/arvados" \
- "$GOPATH/src/git.curoverse.com/arvados.git"; do
- [[ -h "$d" ]] && rm "$d"
- done
- ln -vsfT "$WORKSPACE" "$GOPATH/src/git.curoverse.com/arvados.git"
- go get -v github.com/kardianos/govendor
- cd "$GOPATH/src/git.curoverse.com/arvados.git"
- go get -v -d ...
- "$GOPATH/bin/govendor" sync
- which goimports >/dev/null || go get golang.org/x/tools/cmd/goimports
- ) || fatal "Go setup failed"
+ go mod download || fatal "Go deps failed"
+ which goimports >/dev/null || go get golang.org/x/tools/cmd/goimports || fatal "Go setup failed"
- setup_virtualenv "$VENVDIR" --python python2.7
- . "$VENVDIR/bin/activate"
+ setup_virtualenv "$VENV3DIR"
+ . "$VENV3DIR/bin/activate"
# Needed for run_test_server.py which is used by certain (non-Python) tests.
- pip install --no-cache-dir PyYAML \
- || fatal "pip install PyYAML failed"
-
- eval $(python sdk/python/tests/run_test_server.py setup_config)
-
- # Preinstall libcloud if using a fork; otherwise nodemanager "pip
- # install" won't pick it up by default.
- if [[ -n "$LIBCLOUD_PIN_SRC" ]]; then
- pip freeze 2>/dev/null | egrep ^apache-libcloud==$LIBCLOUD_PIN \
- || pip install --pre --ignore-installed --no-cache-dir "$LIBCLOUD_PIN_SRC" >/dev/null \
- || fatal "pip install apache-libcloud failed"
- fi
-
- # Deactivate Python 2 virtualenv
- deactivate
-
- # If Python 3 is available, set up its virtualenv in $VENV3DIR.
- # Otherwise, skip dependent tests.
- PYTHON3=$(which python3)
- if [[ ${?} = 0 ]]; then
- setup_virtualenv "$VENV3DIR" --python python3
- else
- PYTHON3=
- cat >&2 <<EOF
-
-Warning: python3 could not be found. Python 3 tests will be skipped.
-
-EOF
- fi
-
- if ! which bundler >/dev/null
- then
- gem install --user-install bundler || fatal 'Could not install bundler'
- fi
+ # pdoc3 needed to generate the Python SDK documentation.
+ (
+ set -e
+ "${VENV3DIR}/bin/pip3" install wheel
+ "${VENV3DIR}/bin/pip3" install PyYAML
+ "${VENV3DIR}/bin/pip3" install httplib2
+ "${VENV3DIR}/bin/pip3" install future
+ "${VENV3DIR}/bin/pip3" install google-api-python-client
+ "${VENV3DIR}/bin/pip3" install ciso8601
+ "${VENV3DIR}/bin/pip3" install pycurl
+ "${VENV3DIR}/bin/pip3" install ws4py
+ "${VENV3DIR}/bin/pip3" install pdoc3
+ cd "$WORKSPACE/sdk/python"
+ python3 setup.py install
+ ) || fatal "installing PyYAML and sdk/python failed"
}
retry() {
apps/workbench_units | apps/workbench_functionals | apps/workbench_integration)
suite=apps/workbench
;;
- services/nodemanager | services/nodemanager_integration)
- suite=services/nodemanager_suite
- ;;
*)
suite="${1}"
;;
case "${1}" in
services/api)
stop_services
+ check_arvados_config "$1"
;;
- gofmt | govendor | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/ssh_executor | lib/dispatchcloud/worker)
+ gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/sshexecutor | lib/dispatchcloud/worker)
+ check_arvados_config "$1"
# don't care whether services are running
;;
*)
+ check_arvados_config "$1"
if ! start_services; then
+ checkexit 1 "$1 tests"
title "test $1 -- failed to start services"
return 1
fi
retry do_test_once ${@}
}
+go_ldflags() {
+ version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}
+ echo "-X git.arvados.org/arvados.git/lib/cmd.version=${version} -X main.version=${version}"
+}
+
do_test_once() {
unset result
result=
if which deactivate >/dev/null; then deactivate; fi
- if ! . "$VENVDIR/bin/activate"
+ if ! . "$VENV3DIR/bin/activate"
then
result=1
elif [[ "$2" == "go" ]]
then
covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
- # We do "go get -t" here to catch compilation errors
+ # We do "go install" here to catch compilation errors
# before trying "go test". Otherwise, coverage-reporting
# mode makes Go show the wrong line numbers when reporting
# compilation errors.
- go get -ldflags "-X git.curoverse.com/arvados.git/lib/cmd.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1" && \
- cd "$GOPATH/src/git.curoverse.com/arvados.git/$1" && \
+ go install -ldflags "$(go_ldflags)" "$WORKSPACE/$1" && \
+ cd "$WORKSPACE/$1" && \
if [[ -n "${testargs[$1]}" ]]
then
# "go test -check.vv giturl" doesn't work, but this
else
# The above form gets verbose even when testargs is
# empty, so use this form in such cases:
- go test ${short:+-short} ${coverflags[@]} "git.curoverse.com/arvados.git/$1"
+ go test ${short:+-short} ${coverflags[@]} "git.arvados.org/arvados.git/$1"
fi
result=${result:-$?}
if [[ -f "$WORKSPACE/tmp/.$covername.tmp" ]]
return $result
}
+check_arvados_config() {
+ if [[ "$1" = "env" ]] ; then
+ return
+ fi
+ if [[ -z "$ARVADOS_CONFIG" ]] ; then
+ # Create config file. The run_test_server script requires PyYAML,
+ # so virtualenv needs to be active. Downstream steps like
+ # workbench install which require a valid config.yml.
+ if [[ ! -s "$VENV3DIR/bin/activate" ]] ; then
+ install_env
+ fi
+ . "$VENV3DIR/bin/activate"
+ cd "$WORKSPACE"
+ eval $(python3 sdk/python/tests/run_test_server.py setup_config)
+ deactivate
+ fi
+}
+
do_install() {
if [[ -n "${skip[install]}" || ( -n "${only_install}" && "${only_install}" != "${1}" && "${only_install}" != "${2}" ) ]]; then
return 0
fi
+ check_arvados_config "$1"
retry do_install_once ${@}
}
result=
if which deactivate >/dev/null; then deactivate; fi
- if [[ "$1" != "env" ]] && ! . "$VENVDIR/bin/activate"; then
+ if [[ "$1" != "env" ]] && ! . "$VENV3DIR/bin/activate"; then
result=1
elif [[ "$2" == "go" ]]
then
- go get -ldflags "-X git.curoverse.com/arvados.git/lib/cmd.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1"
+ go install -ldflags "$(go_ldflags)" "$WORKSPACE/$1"
elif [[ "$2" == "pip" ]]
then
# $3 can name a path directory for us to use, including trailing
# install" ensures that we've actually installed the local package
# we just built.
cd "$WORKSPACE/$1" \
- && "${3}python" setup.py sdist rotate --keep=1 --match .tar.gz \
+ && "${3}python3" setup.py sdist rotate --keep=1 --match .tar.gz \
&& cd "$WORKSPACE" \
- && "${3}pip" install --no-cache-dir --quiet "$WORKSPACE/$1/dist"/*.tar.gz \
- && "${3}pip" install --no-cache-dir --quiet --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
+ && "${3}pip3" install --no-cache-dir "$WORKSPACE/$1/dist"/*.tar.gz \
+ && "${3}pip3" install --no-cache-dir --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
elif [[ "$2" != "" ]]
then
"install_$2"
(
set -e
echo "(Running bundle install --local. 'could not find package' messages are OK.)"
- if ! bundle install --local --no-deployment; then
+ if ! "$bundle" install --local --no-deployment; then
echo "(Running bundle install again, without --local.)"
- bundle install --no-deployment
+ "$bundle" install --no-deployment
fi
- bundle package --all
+ "$bundle" package
)
}
install_services/api() {
stop_services
+ check_arvados_config "services/api"
cd "$WORKSPACE/services/api" \
- && RAILS_ENV=test bundle_install_trylocal
+ && RAILS_ENV=test bundle_install_trylocal \
+ || return 1
rm -f config/environments/test.rb
cp config/environments/test.rb.example config/environments/test.rb
# database, so that we can drop it. This assumes the current user
# is a postgresql superuser.
cd "$WORKSPACE/services/api" \
- && test_database=$(python -c "import yaml; print yaml.safe_load(file('$ARVADOS_CONFIG'))['Clusters']['zzzzz']['PostgreSQL']['Connection']['dbname']") \
+ && test_database=$("${VENV3DIR}/bin/python3" -c "import yaml; print(yaml.safe_load(open('$ARVADOS_CONFIG','r'))['Clusters']['zzzzz']['PostgreSQL']['Connection']['dbname'])") \
&& psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.pid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
mkdir -p "$WORKSPACE/services/api/tmp/pids"
if [[ ! -e "$cert.pem" || "$(date -r "$cert.pem" +%s)" -lt 1512659226 ]]; then
(
dir="$WORKSPACE/services/api/tmp"
- set -ex
+ set -e
openssl req -newkey rsa:2048 -nodes -subj '/C=US/ST=State/L=City/CN=localhost' -out "$cert.csr" -keyout "$cert.key" </dev/null
openssl x509 -req -in "$cert.csr" -signkey "$cert.key" -out "$cert.pem" -days 3650 -extfile <(printf 'subjectAltName=DNS:localhost,DNS:::1,DNS:0.0.0.0,DNS:127.0.0.1,IP:::1,IP:0.0.0.0,IP:127.0.0.1')
) || return 1
&& git --git-dir internal.git init \
|| return 1
- cd "$WORKSPACE/services/api" \
- && RAILS_ENV=test bundle exec rails db:environment:set \
- && RAILS_ENV=test bundle exec rake db:drop \
- && RAILS_ENV=test bundle exec rake db:setup \
- && RAILS_ENV=test bundle exec rake db:fixtures:load
+ (
+ set -ex
+ cd "$WORKSPACE/services/api"
+ export RAILS_ENV=test
+ if "$bundle" exec rails db:environment:set ; then
+ "$bundle" exec rake db:drop
+ fi
+ "$bundle" exec rake db:setup
+ "$bundle" exec rake db:fixtures:load
+ ) || return 1
}
declare -a pythonstuff
pythonstuff=(
- sdk/pam
- sdk/python
sdk/python:py3
- sdk/cwl
sdk/cwl:py3
services/dockercleaner:py3
- services/fuse
services/fuse:py3
- services/nodemanager
- tools/crunchstat-summary
tools/crunchstat-summary:py3
)
cd "$WORKSPACE/apps/workbench" \
&& mkdir -p tmp/cache \
&& RAILS_ENV=test bundle_install_trylocal \
- && RAILS_ENV=test RAILS_GROUPS=assets bundle exec rake npm:install
+ && RAILS_ENV=test RAILS_GROUPS=assets "$bundle" exec rake npm:install
}
test_doc() {
(
set -e
cd "$WORKSPACE/doc"
- ARVADOS_API_HOST=qr1hi.arvadosapi.com
+ ARVADOS_API_HOST=pirca.arvadosapi.com
# Make sure python-epydoc is installed or the next line won't
# do much good!
- PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
+ PYTHONPATH=$WORKSPACE/sdk/python/ "$bundle" exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
)
}
[[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
}
-test_govendor() {
- (
- set -e
- cd "$GOPATH/src/git.curoverse.com/arvados.git"
- # Remove cached source dirs in workdir. Otherwise, they will
- # not qualify as +missing or +external below, and we won't be
- # able to detect that they're missing from vendor/vendor.json.
- rm -rf vendor/*/
- go get -v -d ...
- "$GOPATH/bin/govendor" sync
- if [[ -n $("$GOPATH/bin/govendor" list +unused +missing +external | tee /dev/stderr) ]]; then
- echo >&2 "vendor/vendor.json has unused or missing dependencies -- try:
-
-(export GOPATH=\"${GOPATH}\"; cd \$GOPATH/src/git.curoverse.com/arvados.git && \$GOPATH/bin/govendor add +missing +external && \$GOPATH/bin/govendor remove +unused)
-
-"
- return 1
- fi
- )
-}
-
test_services/api() {
rm -f "$WORKSPACE/services/api/git-commit.version"
cd "$WORKSPACE/services/api" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test TESTOPTS='-v -d' ${testargs[services/api]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake test TESTOPTS=\'-v -d\' ${testargs[services/api]}
}
test_sdk/ruby() {
cd "$WORKSPACE/sdk/ruby" \
- && bundle exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
+ && "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
}
test_sdk/R() {
test_sdk/cli() {
cd "$WORKSPACE/sdk/cli" \
&& mkdir -p /tmp/keep \
- && KEEP_LOCAL_STORE=/tmp/keep bundle exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
+ && KEEP_LOCAL_STORE=/tmp/keep "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
}
test_sdk/java-v2() {
- cd "$WORKSPACE/sdk/java-v2" && gradle test
+ cd "$WORKSPACE/sdk/java-v2" && gradle test ${testargs[sdk/java-v2]}
}
test_services/login-sync() {
cd "$WORKSPACE/services/login-sync" \
- && bundle exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
-}
-
-test_services/nodemanager_integration() {
- cd "$WORKSPACE/services/nodemanager" \
- && tests/integration_test.py ${testargs[services/nodemanager_integration]}
+ && "$bundle" exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
}
test_apps/workbench_units() {
local TASK="test:units"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_units]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} TESTOPTS='-v -d' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
}
test_apps/workbench_functionals() {
local TASK="test:functionals"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_functionals]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} TESTOPTS='-v -d' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
}
test_apps/workbench_integration() {
local TASK="test:integration"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_integration]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} TESTOPTS='-v -d' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
}
test_apps/workbench_benchmark() {
local TASK="test:benchmark"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_benchmark]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
}
test_apps/workbench_profile() {
local TASK="test:profile"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_profile]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} ${testargs[apps/workbench_profile]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_profile]}
}
install_deps() {
do_install cmd/arvados-server go
do_install sdk/cli
do_install sdk/perl
- do_install sdk/python pip
+ do_install sdk/python pip "${VENV3DIR}/bin/"
do_install sdk/ruby
do_install services/api
do_install services/arv-git-httpd go
do_install services/login-sync
for p in "${pythonstuff[@]}"
do
- dir=${p%:py3}
- if [[ ${dir} = ${p} ]]; then
- if [[ -z ${skip[python2]} ]]; then
- do_install ${dir} pip
- fi
- elif [[ -n ${PYTHON3} ]]; then
- if [[ -z ${skip[python3]} ]]; then
- do_install ${dir} pip "$VENV3DIR/bin/"
- fi
- fi
+ dir=${p%:py3}
+ if [[ -z ${skip[python3]} ]]; then
+ do_install ${dir} pip "$VENV3DIR/bin/"
+ fi
done
for g in "${gostuff[@]}"
do
fi
do_test gofmt
- do_test govendor
do_test doc
do_test sdk/ruby
do_test sdk/R
do_test sdk/cli
do_test services/login-sync
do_test sdk/java-v2
- do_test services/nodemanager_integration
for p in "${pythonstuff[@]}"
do
dir=${p%:py3}
- if [[ ${dir} = ${p} ]]; then
- if [[ -z ${skip[python2]} ]]; then
- do_test ${dir} pip
- fi
- elif [[ -n ${PYTHON3} ]]; then
- if [[ -z ${skip[python3]} ]]; then
- do_test ${dir} pip "$VENV3DIR/bin/"
- fi
+ if [[ -z ${skip[python3]} ]]; then
+ do_test ${dir} pip "$VENV3DIR/bin/"
fi
done
echo "== Interactive commands:"
echo "TARGET (short for 'test DIR')"
echo "test TARGET"
+ echo "10 test TARGET (run test 10 times)"
echo "test TARGET:py3 (test with python3)"
echo "test TARGET -check.vv (pass arguments to test)"
echo "install TARGET"
done
for p in "${pythonstuff[@]}"; do
dir=${p%:py3}
- testfuncargs[$dir]="$dir pip $VENVDIR/bin/"
testfuncargs[$dir:py3]="$dir pip $VENV3DIR/bin/"
done
skip=()
only=()
only_install=()
- if [[ -e "$VENVDIR/bin/activate" ]]; then stop_services; fi
+ if [[ -e "$VENV3DIR/bin/activate" ]]; then stop_services; fi
setnextcmd() {
if [[ "$TERM" = dumb ]]; then
# assume emacs, or something, is offering a history buffer
# and pre-populating the command will only cause trouble
nextcmd=
- elif [[ ! -e "$VENVDIR/bin/activate" ]]; then
+ elif [[ ! -e "$VENV3DIR/bin/activate" ]]; then
nextcmd="install deps"
else
nextcmd=""
while read -p 'What next? ' -e -i "$nextcmd" nextcmd; do
history -s "$nextcmd"
history -w
+ count=1
+ if [[ "${nextcmd}" =~ ^[0-9] ]]; then
+ read count nextcmd <<<"${nextcmd}"
+ fi
read verb target opts <<<"${nextcmd}"
target="${target%/}"
target="${target/\/:/:}"
${verb}_${target}
;;
*)
- testargs["$target"]="${opts}"
+ argstarget=${target%:py3}
+ testargs["$argstarget"]="${opts}"
tt="${testfuncargs[${target}]}"
tt="${tt:-$target}"
- do_$verb $tt
+ while [ $count -gt 0 ]; do
+ do_$verb $tt
+ let "count=count-1"
+ done
;;
esac
;;