#
# SPDX-License-Identifier: AGPL-3.0
-. `dirname "$(readlink -f "$0")"`/run-library.sh
-. `dirname "$(readlink -f "$0")"`/libcloud-pin.sh
+. "$(dirname "$(readlink -f "$0")")"/run-library.sh || exit 1
read -rd "\000" helpmessage <<EOF
-$(basename $0): Build Arvados packages
+$(basename "$0"): Build Arvados packages
Syntax:
- WORKSPACE=/path/to/arvados $(basename $0) [options]
+ WORKSPACE=/path/to/arvados $(basename "$0") [options]
Options:
--debug
Output debug information (default: false)
--target <target>
- Distribution to build packages for (default: debian8)
+ Distribution to build packages for (default: debian10)
--only-build <package>
- Build only a specific package (or $ONLY_BUILD from environment)
+ Build only a specific package (or ONLY_BUILD from environment)
+--arch <arch>
+ Build a specific architecture (or ARCH from environment, defaults to native architecture)
+--force-build
+ Build even if the package exists upstream or if it has already been
+ built locally
--command
Build command to execute (defaults to the run command defined in the
Docker image)
EOF
-EXITCODE=0
+# Begin of user configuration
+
+# set to --no-cache-dir to disable pip caching
+CACHE_FLAG=
+
+MAINTAINER="Arvados Package Maintainers <packaging@arvados.org>"
+VENDOR="The Arvados Project"
+
+# End of user configuration
+
DEBUG=${ARVADOS_DEBUG:-0}
-TARGET=debian8
+FORCE_BUILD=${FORCE_BUILD:-0}
+EXITCODE=0
+TARGET=debian10
COMMAND=
PARSEDOPTS=$(getopt --name "$0" --longoptions \
- help,build-bundle-packages,debug,target:,only-build: \
+ help,build-bundle-packages,debug,target:,only-build:,arch:,force-build \
-- "" "$@")
if [ $? -ne 0 ]; then
exit 1
--only-build)
ONLY_BUILD="$2"; shift
;;
+ --force-build)
+ FORCE_BUILD=1
+ ;;
+ --arch)
+ ARCH="$2"; shift
+ ;;
--debug)
DEBUG=1
;;
DASHQ_UNLESS_DEBUG=
fi
-declare -a PYTHON_BACKPORTS PYTHON3_BACKPORTS
+declare -a PYTHON3_BACKPORTS
-PYTHON2_VERSION=2.7
-PYTHON3_VERSION=$(python3 -c 'import sys; print("{v.major}.{v.minor}".format(v=sys.version_info))')
+PYTHON3_EXECUTABLE=python3
+PYTHON3_VERSION=$($PYTHON3_EXECUTABLE -c 'import sys; print("{v.major}.{v.minor}".format(v=sys.version_info))')
## These defaults are suitable for any Debian-based distribution.
# You can customize them as needed in distro sections below.
-PYTHON2_PACKAGE=python$PYTHON2_VERSION
-PYTHON2_PKG_PREFIX=python
-PYTHON2_PREFIX=/usr
-PYTHON2_INSTALL_LIB=lib/python$PYTHON2_VERSION/dist-packages
-
PYTHON3_PACKAGE=python$PYTHON3_VERSION
PYTHON3_PKG_PREFIX=python3
PYTHON3_PREFIX=/usr
debian*)
FORMAT=deb
;;
+ ubuntu1804)
+ FORMAT=deb
+ PYTHON3_EXECUTABLE=python3.8
+ PYTHON3_VERSION=$($PYTHON3_EXECUTABLE -c 'import sys; print("{v.major}.{v.minor}".format(v=sys.version_info))')
+ PYTHON3_PACKAGE=python$PYTHON3_VERSION
+ PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/dist-packages
+ ;;
ubuntu*)
FORMAT=deb
;;
centos*)
FORMAT=rpm
- PYTHON2_PACKAGE=$(rpm -qf "$(which python$PYTHON2_VERSION)" --queryformat '%{NAME}\n')
- PYTHON2_PKG_PREFIX=$PYTHON2_PACKAGE
- PYTHON2_INSTALL_LIB=lib/python$PYTHON2_VERSION/site-packages
- PYTHON3_PACKAGE=$(rpm -qf "$(which python$PYTHON3_VERSION)" --queryformat '%{NAME}\n')
+ PYTHON3_PACKAGE=$(rpm -qf "$(which python"$PYTHON3_VERSION")" --queryformat '%{NAME}\n')
PYTHON3_PKG_PREFIX=$PYTHON3_PACKAGE
- PYTHON3_PREFIX=/opt/rh/python33/root/usr
+ PYTHON3_PREFIX=/usr
PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/site-packages
export PYCURL_SSL_LIBRARY=nss
;;
esac
-if ! [[ -n "$WORKSPACE" ]]; then
+if [[ -z "$WORKSPACE" ]]; then
echo >&2 "$helpmessage"
echo >&2
echo >&2 "Error: WORKSPACE environment variable not set"
# Test for fpm
fpm --version >/dev/null 2>&1
-if [[ "$?" != 0 ]]; then
+if [[ $? -ne 0 ]]; then
echo >&2 "$helpmessage"
echo >&2
echo >&2 "Error: fpm not found"
exit 1
fi
-EASY_INSTALL2=$(find_easy_install -$PYTHON2_VERSION "")
-EASY_INSTALL3=$(find_easy_install -$PYTHON3_VERSION 3)
-
-RUN_BUILD_PACKAGES_PATH="`dirname \"$0\"`"
-RUN_BUILD_PACKAGES_PATH="`( cd \"$RUN_BUILD_PACKAGES_PATH\" && pwd )`" # absolutized and normalized
+RUN_BUILD_PACKAGES_PATH="$(dirname "$0")"
+RUN_BUILD_PACKAGES_PATH="$(cd "$RUN_BUILD_PACKAGES_PATH" && pwd)" # absolutized and normalized
if [ -z "$RUN_BUILD_PACKAGES_PATH" ] ; then
# error; for some reason, the path is not accessible
# to the script (e.g. permissions re-evaled after suid)
chmod o+r "$WORKSPACE" -R
# More cleanup - make sure all executables that we'll package are 755
-cd "$WORKSPACE"
-find -type d -name 'bin' |xargs -I {} find {} -type f |xargs -I {} chmod 755 {}
+cd "$WORKSPACE" || exit 1
+find . -type d -name 'bin' -print0 |xargs -0 -I {} find {} -type f -print0 |xargs -0 -I {} chmod 755 {}
# Now fix our umask to something better suited to building and publishing
# gems and packages
umask 0022
-debug_echo "umask is" `umask`
+debug_echo "umask is" "$(umask)"
if [[ ! -d "$WORKSPACE/packages/$TARGET" ]]; then
- mkdir -p $WORKSPACE/packages/$TARGET
+ mkdir -p "$WORKSPACE/packages/$TARGET"
chown --reference="$WORKSPACE" "$WORKSPACE/packages/$TARGET"
fi
+# Required due to CVE-2022-24765
+git config --global --add safe.directory /arvados
+
# Perl packages
debug_echo -e "\nPerl packages\n"
-if [[ -z "$ONLY_BUILD" ]] || [[ "libarvados-perl" = "$ONLY_BUILD" ]] ; then
- cd "$WORKSPACE/sdk/perl"
- libarvados_perl_version="$(version_from_git)"
-
- cd $WORKSPACE/packages/$TARGET
- test_package_presence libarvados-perl "$libarvados_perl_version"
-
- if [[ "$?" == "0" ]]; then
- cd "$WORKSPACE/sdk/perl"
-
- if [[ -e Makefile ]]; then
- make realclean >"$STDOUT_IF_DEBUG"
- fi
- find -maxdepth 1 \( -name 'MANIFEST*' -or -name "libarvados-perl*.$FORMAT" \) \
- -delete
- rm -rf install
-
- perl Makefile.PL INSTALL_BASE=install >"$STDOUT_IF_DEBUG" && \
- make install INSTALLDIRS=perl >"$STDOUT_IF_DEBUG" && \
- fpm_build install/lib/=/usr/share libarvados-perl \
- "Curoverse, Inc." dir "$(version_from_git)" install/man/=/usr/share/man \
- "$WORKSPACE/apache-2.0.txt=/usr/share/doc/libarvados-perl/apache-2.0.txt" && \
- mv --no-clobber libarvados-perl*.$FORMAT "$WORKSPACE/packages/$TARGET/"
- fi
-fi
+handle_libarvados_perl
# Ruby gems
debug_echo -e "\nRuby gems\n"
FPM_GEM_PREFIX=$($GEM environment gemdir)
-cd "$WORKSPACE/sdk/ruby"
+cd "$WORKSPACE/sdk/ruby" || exit 1
handle_ruby_gem arvados
-cd "$WORKSPACE/sdk/cli"
+cd "$WORKSPACE/sdk/cli" || exit 1
handle_ruby_gem arvados-cli
-cd "$WORKSPACE/services/login-sync"
+cd "$WORKSPACE/services/login-sync" || exit 1
handle_ruby_gem arvados-login-sync
-# Python packages
-debug_echo -e "\nPython packages\n"
-
-cd "$WORKSPACE/sdk/pam"
-handle_python_package
-
-cd "$WORKSPACE/sdk/python"
-handle_python_package
-
-cd "$WORKSPACE/sdk/cwl"
-handle_python_package
-
-cd "$WORKSPACE/services/fuse"
-handle_python_package
-
-cd "$WORKSPACE/services/nodemanager"
-handle_python_package
-
# arvados-src
-(
- cd "$WORKSPACE"
- COMMIT_HASH=$(format_last_commit_here "%H")
- arvados_src_version="$(version_from_git)"
-
- cd $WORKSPACE/packages/$TARGET
- test_package_presence arvados-src $arvados_src_version src ""
-
- if [[ "$?" == "0" ]]; then
- cd "$WORKSPACE"
- SRC_BUILD_DIR=$(mktemp -d)
- # mktemp creates the directory with 0700 permissions by default
- chmod 755 $SRC_BUILD_DIR
- git clone $DASHQ_UNLESS_DEBUG "$WORKSPACE/.git" "$SRC_BUILD_DIR"
- cd "$SRC_BUILD_DIR"
-
- # go into detached-head state
- git checkout $DASHQ_UNLESS_DEBUG "$COMMIT_HASH"
- echo "$COMMIT_HASH" >git-commit.version
-
- cd "$SRC_BUILD_DIR"
- PKG_VERSION=$(version_from_git)
- cd $WORKSPACE/packages/$TARGET
- fpm_build $SRC_BUILD_DIR/=/usr/local/arvados/src arvados-src 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--exclude=usr/local/arvados/src/.git" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=The Arvados source code" "--architecture=all"
-
- rm -rf "$SRC_BUILD_DIR"
+handle_arvados_src
- fi
-)
+# Go packages
+debug_echo -e "\nGo packages\n"
# Go binaries
-cd $WORKSPACE/packages/$TARGET
-export GOPATH=$(mktemp -d)
-go get github.com/kardianos/govendor
-package_go_binary cmd/arvados-client arvados-client \
+export GOPATH=~/go
+package_go_binary cmd/arvados-client arvados-client "$FORMAT" "$ARCH" \
"Arvados command line tool (beta)"
-package_go_binary cmd/arvados-server arvados-server \
+package_go_binary cmd/arvados-server arvados-server "$FORMAT" "$ARCH" \
"Arvados server daemons"
-package_go_binary cmd/arvados-server arvados-controller \
+package_go_binary cmd/arvados-server arvados-controller "$FORMAT" "$ARCH" \
"Arvados cluster controller daemon"
-package_go_binary sdk/go/crunchrunner crunchrunner \
- "Crunchrunner executes a command inside a container and uploads the output"
-package_go_binary services/arv-git-httpd arvados-git-httpd \
+package_go_binary cmd/arvados-server arvados-dispatch-cloud "$FORMAT" "$ARCH" \
+ "Arvados cluster cloud dispatch"
+package_go_binary cmd/arvados-server arvados-dispatch-lsf "$FORMAT" "$ARCH" \
+ "Dispatch Arvados containers to an LSF cluster"
+package_go_binary cmd/arvados-server arvados-git-httpd "$FORMAT" "$ARCH" \
"Provide authenticated http access to Arvados-hosted git repositories"
-package_go_binary services/crunch-dispatch-local crunch-dispatch-local \
+package_go_binary services/crunch-dispatch-local crunch-dispatch-local "$FORMAT" "$ARCH" \
"Dispatch Crunch containers on the local system"
-package_go_binary services/crunch-dispatch-slurm crunch-dispatch-slurm \
+package_go_binary cmd/arvados-server crunch-dispatch-slurm "$FORMAT" "$ARCH" \
"Dispatch Crunch containers to a SLURM cluster"
-package_go_binary services/crunch-run crunch-run \
+package_go_binary cmd/arvados-server crunch-run "$FORMAT" "$ARCH" \
"Supervise a single Crunch container"
-package_go_binary services/crunchstat crunchstat \
+package_go_binary services/crunchstat crunchstat "$FORMAT" "$ARCH" \
"Gather cpu/memory/network statistics of running Crunch jobs"
-package_go_binary services/health arvados-health \
+package_go_binary cmd/arvados-server arvados-health "$FORMAT" "$ARCH" \
"Check health of all Arvados cluster services"
-package_go_binary services/keep-balance keep-balance \
+package_go_binary cmd/arvados-server keep-balance "$FORMAT" "$ARCH" \
"Rebalance and garbage-collect data blocks stored in Arvados Keep"
-package_go_binary services/keepproxy keepproxy \
+package_go_binary cmd/arvados-server keepproxy "$FORMAT" "$ARCH" \
"Make a Keep cluster accessible to clients that are not on the LAN"
-package_go_binary services/keepstore keepstore \
+package_go_binary cmd/arvados-server keepstore "$FORMAT" "$ARCH" \
"Keep storage daemon, accessible to clients on the LAN"
-package_go_binary services/keep-web keep-web \
+package_go_binary cmd/arvados-server keep-web "$FORMAT" "$ARCH" \
"Static web hosting service for user data stored in Arvados Keep"
-package_go_binary services/ws arvados-ws \
+package_go_binary cmd/arvados-server arvados-ws "$FORMAT" "$ARCH" \
"Arvados Websocket server"
-package_go_binary tools/sync-groups arvados-sync-groups \
+package_go_binary tools/sync-groups arvados-sync-groups "$FORMAT" "$ARCH" \
"Synchronize remote groups into Arvados from an external source"
-package_go_binary tools/keep-block-check keep-block-check \
+package_go_binary tools/sync-users arvados-sync-users "$FORMAT" "$ARCH" \
+ "Synchronize remote users into Arvados from an external source"
+package_go_binary tools/keep-block-check keep-block-check "$FORMAT" "$ARCH" \
"Verify that all data from one set of Keep servers to another was copied"
-package_go_binary tools/keep-rsync keep-rsync \
+package_go_binary tools/keep-rsync keep-rsync "$FORMAT" "$ARCH" \
"Copy all data from one set of Keep servers to another"
-package_go_binary tools/keep-exercise keep-exercise \
+package_go_binary tools/keep-exercise keep-exercise "$FORMAT" "$ARCH" \
"Performance testing tool for Arvados Keep"
+package_go_so lib/pam pam_arvados.so libpam-arvados-go "$FORMAT" "$ARCH" \
+ "Arvados PAM authentication module"
-# The Python SDK
-# Please resist the temptation to add --no-python-fix-name to the fpm call here
-# (which would remove the python- prefix from the package name), because this
-# package is a dependency of arvados-fuse, and fpm can not omit the python-
-# prefix from only one of the dependencies of a package... Maybe I could
-# whip up a patch and send it upstream, but that will be for another day. Ward,
-# 2014-05-15
-cd $WORKSPACE/packages/$TARGET
-rm -rf "$WORKSPACE/sdk/python/build"
-arvados_python_client_version=${ARVADOS_BUILDING_VERSION:-$(awk '($1 == "Version:"){print $2}' $WORKSPACE/sdk/python/arvados_python_client.egg-info/PKG-INFO)}
-test_package_presence ${PYTHON2_PKG_PREFIX}-arvados-python-client "$arvados_python_client_version" python
-if [[ "$?" == "0" ]]; then
- fpm_build $WORKSPACE/sdk/python "${PYTHON2_PKG_PREFIX}-arvados-python-client" 'Curoverse, Inc.' 'python' "$arvados_python_client_version" "--url=https://arvados.org" "--description=The Arvados Python SDK" --depends "${PYTHON2_PKG_PREFIX}-setuptools" --deb-recommends=git
-fi
-
-# cwl-runner
-cd $WORKSPACE/packages/$TARGET
-rm -rf "$WORKSPACE/sdk/cwl/build"
-arvados_cwl_runner_version=${ARVADOS_BUILDING_VERSION:-$(awk '($1 == "Version:"){print $2}' $WORKSPACE/sdk/cwl/arvados_cwl_runner.egg-info/PKG-INFO)}
-declare -a iterargs=()
-if [[ -z "$ARVADOS_BUILDING_VERSION" ]]; then
- arvados_cwl_runner_iteration=4
- iterargs+=(--iteration $arvados_cwl_runner_iteration)
-else
- arvados_cwl_runner_iteration=
-fi
-test_package_presence ${PYTHON2_PKG_PREFIX}-arvados-cwl-runner "$arvados_cwl_runner_version" python "$arvados_cwl_runner_iteration"
-if [[ "$?" == "0" ]]; then
- fpm_build $WORKSPACE/sdk/cwl "${PYTHON2_PKG_PREFIX}-arvados-cwl-runner" 'Curoverse, Inc.' 'python' "$arvados_cwl_runner_version" "--url=https://arvados.org" "--description=The Arvados CWL runner" --depends "${PYTHON2_PKG_PREFIX}-setuptools" --depends "${PYTHON2_PKG_PREFIX}-subprocess32 >= 3.5.0" --depends "${PYTHON2_PKG_PREFIX}-pathlib2" --depends "${PYTHON2_PKG_PREFIX}-scandir" "${iterargs[@]}"
-fi
-
-# schema_salad. This is a python dependency of arvados-cwl-runner,
-# but we can't use the usual PYTHONPACKAGES way to build this package due to the
-# intricacies of how version numbers get generated in setup.py: we need a specific version,
-# e.g. 1.7.20160316203940. If we don't explicitly list that version with the -v
-# argument to fpm, and instead specify it as schema_salad==1.7.20160316203940, we get
-# a package with version 1.7. That's because our gittagger hack is not being
-# picked up by self.distribution.get_version(), which is called from
-# https://github.com/jordansissel/fpm/blob/master/lib/fpm/package/pyfpm/get_metadata.py
-# by means of this command:
-#
-# python2.7 setup.py --command-packages=pyfpm get_metadata --output=metadata.json
-#
-# So we build this thing separately.
-#
-# Ward, 2016-03-17
-saladversion=$(cat "$WORKSPACE/sdk/cwl/setup.py" | grep schema-salad== | sed "s/.*==\(.*\)'.*/\1/")
-test_package_presence python-schema-salad "$saladversion" python 2
-if [[ "$?" == "0" ]]; then
- fpm_build schema_salad "" "" python $saladversion --depends "${PYTHON2_PKG_PREFIX}-lockfile >= 1:0.12.2-2" --depends "${PYTHON2_PKG_PREFIX}-avro = 1.8.1-2" --iteration 2
-fi
+# Python packages
+debug_echo -e "\nPython packages\n"
-# And for cwltool we have the same problem as for schema_salad. Ward, 2016-03-17
-cwltoolversion=$(cat "$WORKSPACE/sdk/cwl/setup.py" | grep cwltool== | sed "s/.*==\(.*\)'.*/\1/")
-test_package_presence python-cwltool "$cwltoolversion" python 2
-if [[ "$?" == "0" ]]; then
- fpm_build cwltool "" "" python $cwltoolversion --iteration 2
-fi
+# The Python SDK - Python3 package
+fpm_build_virtualenv "arvados-python-client" "sdk/python" "$FORMAT" "$ARCH"
-# The PAM module
-if [[ $TARGET =~ debian|ubuntu ]]; then
- cd $WORKSPACE/packages/$TARGET
- rm -rf "$WORKSPACE/sdk/pam/build"
- libpam_arvados_version=$(awk '($1 == "Version:"){print $2}' $WORKSPACE/sdk/pam/arvados_pam.egg-info/PKG-INFO)
- test_package_presence libpam-arvados "$libpam_arvados_version" python
- if [[ "$?" == "0" ]]; then
- fpm_build $WORKSPACE/sdk/pam libpam-arvados 'Curoverse, Inc.' 'python' "$libpam_arvados_version" "--url=https://arvados.org" "--description=PAM module for authenticating shell logins using Arvados API tokens" --depends libpam-python
- fi
-fi
+# Arvados cwl runner - Python3 package
+fpm_build_virtualenv "arvados-cwl-runner" "sdk/cwl" "$FORMAT" "$ARCH"
-# The FUSE driver
-# Please see comment about --no-python-fix-name above; we stay consistent and do
-# not omit the python- prefix first.
-cd $WORKSPACE/packages/$TARGET
-rm -rf "$WORKSPACE/services/fuse/build"
-arvados_fuse_version=${ARVADOS_BUILDING_VERSION:-$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/fuse/arvados_fuse.egg-info/PKG-INFO)}
-test_package_presence "${PYTHON2_PKG_PREFIX}-arvados-fuse" "$arvados_fuse_version" python
-if [[ "$?" == "0" ]]; then
- fpm_build $WORKSPACE/services/fuse "${PYTHON2_PKG_PREFIX}-arvados-fuse" 'Curoverse, Inc.' 'python' "$arvados_fuse_version" "--url=https://arvados.org" "--description=The Keep FUSE driver" --depends "${PYTHON2_PKG_PREFIX}-setuptools"
-fi
+# The FUSE driver - Python3 package
+fpm_build_virtualenv "arvados-fuse" "services/fuse" "$FORMAT" "$ARCH"
-# The node manager
-cd $WORKSPACE/packages/$TARGET
-rm -rf "$WORKSPACE/services/nodemanager/build"
-nodemanager_version=${ARVADOS_BUILDING_VERSION:-$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/nodemanager/arvados_node_manager.egg-info/PKG-INFO)}
-test_package_presence arvados-node-manager "$nodemanager_version" python
-if [[ "$?" == "0" ]]; then
- fpm_build $WORKSPACE/services/nodemanager arvados-node-manager 'Curoverse, Inc.' 'python' "$nodemanager_version" "--url=https://arvados.org" "--description=The Arvados node manager" --depends "${PYTHON2_PKG_PREFIX}-setuptools"
-fi
+# The Arvados crunchstat-summary tool
+fpm_build_virtualenv "crunchstat-summary" "tools/crunchstat-summary" "$FORMAT" "$ARCH"
# The Docker image cleaner
-cd $WORKSPACE/packages/$TARGET
-rm -rf "$WORKSPACE/services/dockercleaner/build"
-dockercleaner_version=${ARVADOS_BUILDING_VERSION:-$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/dockercleaner/arvados_docker_cleaner.egg-info/PKG-INFO)}
-iteration="${ARVADOS_BUILDING_ITERATION:-3}"
-test_package_presence arvados-docker-cleaner "$dockercleaner_version" python "$iteration"
-if [[ "$?" == "0" ]]; then
- fpm_build $WORKSPACE/services/dockercleaner arvados-docker-cleaner 'Curoverse, Inc.' 'python3' "$dockercleaner_version" "--url=https://arvados.org" "--description=The Arvados Docker image cleaner" --depends "${PYTHON3_PKG_PREFIX}-websocket-client = 0.37.0" --iteration "$iteration"
-fi
+fpm_build_virtualenv "arvados-docker-cleaner" "services/dockercleaner" "$FORMAT" "$ARCH"
-# The Arvados crunchstat-summary tool
-cd $WORKSPACE/packages/$TARGET
-crunchstat_summary_version=${ARVADOS_BUILDING_VERSION:-$(awk '($1 == "Version:"){print $2}' $WORKSPACE/tools/crunchstat-summary/crunchstat_summary.egg-info/PKG-INFO)}
-iteration="${ARVADOS_BUILDING_ITERATION:-2}"
-test_package_presence "$PYTHON2_PKG_PREFIX"-crunchstat-summary "$crunchstat_summary_version" python "$iteration"
-if [[ "$?" == "0" ]]; then
- rm -rf "$WORKSPACE/tools/crunchstat-summary/build"
- fpm_build $WORKSPACE/tools/crunchstat-summary ${PYTHON2_PKG_PREFIX}-crunchstat-summary 'Curoverse, Inc.' 'python' "$crunchstat_summary_version" "--url=https://arvados.org" "--description=Crunchstat-summary reads Arvados Crunch log files and summarize resource usage" --iteration "$iteration"
-fi
+# The Arvados user activity tool
+fpm_build_virtualenv "arvados-user-activity" "tools/user-activity" "$FORMAT" "$ARCH"
-# Forked libcloud
-if test_package_presence "$PYTHON2_PKG_PREFIX"-apache-libcloud "$LIBCLOUD_PIN" python 2
-then
- LIBCLOUD_DIR=$(mktemp -d)
- (
- cd $LIBCLOUD_DIR
- git clone $DASHQ_UNLESS_DEBUG https://github.com/curoverse/libcloud.git .
- git checkout $DASHQ_UNLESS_DEBUG apache-libcloud-$LIBCLOUD_PIN
- # libcloud is absurdly noisy without -q, so force -q here
- OLD_DASHQ_UNLESS_DEBUG=$DASHQ_UNLESS_DEBUG
- DASHQ_UNLESS_DEBUG=-q
- handle_python_package
- DASHQ_UNLESS_DEBUG=$OLD_DASHQ_UNLESS_DEBUG
- )
-
- # libcloud >= 2.3.0 now requires python-requests 2.4.3 or higher, otherwise
- # it throws
- # ImportError: No module named packages.urllib3.poolmanager
- # when loaded. We only see this problem on ubuntu1404, because that is our
- # only supported distribution that ships with a python-requests older than
- # 2.4.3.
- fpm_build $LIBCLOUD_DIR "$PYTHON2_PKG_PREFIX"-apache-libcloud "" python "" --iteration 2 --depends 'python-requests >= 2.4.3'
- rm -rf $LIBCLOUD_DIR
-fi
+# The python->python3 metapackages
+build_metapackage "arvados-fuse" "services/fuse"
+build_metapackage "arvados-python-client" "services/fuse"
+build_metapackage "arvados-cwl-runner" "sdk/cwl"
+build_metapackage "crunchstat-summary" "tools/crunchstat-summary"
+build_metapackage "arvados-docker-cleaner" "services/dockercleaner"
+build_metapackage "arvados-user-activity" "tools/user-activity"
-# Python 2 dependencies
-declare -a PIP_DOWNLOAD_SWITCHES=(--no-deps)
-# Add --no-use-wheel if this pip knows it.
-pip wheel --help >/dev/null 2>&1
-case "$?" in
- 0) PIP_DOWNLOAD_SWITCHES+=(--no-use-wheel) ;;
- 2) ;;
- *) echo "WARNING: `pip wheel` test returned unknown exit code $?" ;;
-esac
+# The cwltest package, which lives out of tree
+handle_cwltest "$FORMAT" "$ARCH"
-while read -r line || [[ -n "$line" ]]; do
-# echo "Text read from file: $line"
- if [[ "$line" =~ ^# ]]; then
- continue
- fi
- IFS='|'; arr=($line); unset IFS
-
- dist=${arr[0]}
-
- IFS=',';dists=($dist); unset IFS
-
- MATCH=0
- for d in "${dists[@]}"; do
- if [[ "$d" == "$TARGET" ]] || [[ "$d" == "all" ]]; then
- MATCH=1
- fi
- done
-
- if [[ "$MATCH" != "1" ]]; then
- continue
- fi
- name=${arr[1]}
- version=${arr[2]}
- iteration=${arr[3]}
- pkgtype=${arr[4]}
- arch=${arr[5]}
- extra=${arr[6]}
- declare -a 'extra_arr=('"$extra"')'
-
- if [[ "$FORMAT" == "rpm" ]]; then
- if [[ "$arch" == "all" ]]; then
- arch="noarch"
- fi
- if [[ "$arch" == "amd64" ]]; then
- arch="x86_64"
- fi
- fi
-
- if [[ "$pkgtype" == "python" ]]; then
- outname=$(echo "$name" | sed -e 's/^python-//' -e 's/_/-/g' -e "s/^/${PYTHON2_PKG_PREFIX}-/")
- else
- outname=$(echo "$name" | sed -e 's/^python-//' -e 's/_/-/g' -e "s/^/${PYTHON3_PKG_PREFIX}-/")
- fi
-
- if [[ -n "$ONLY_BUILD" ]] && [[ "$outname" != "$ONLY_BUILD" ]] ; then
- continue
- fi
-
- case "$name" in
- httplib2|google-api-python-client)
- test_package_presence $outname $version $pkgtype $iteration $arch
- if [[ "$?" == "0" ]]; then
- # Work around 0640 permissions on some package files.
- # See #7591 and #7991.
- pyfpm_workdir=$(mktemp --tmpdir -d pyfpm-XXXXXX) && (
- set -e
- cd "$pyfpm_workdir"
- pip install "${PIP_DOWNLOAD_SWITCHES[@]}" --download . "$name==$version"
- # Sometimes pip gives us a tarball, sometimes a zip file...
- DOWNLOADED=`ls $name-*`
- [[ "$DOWNLOADED" =~ ".tar" ]] && tar -xf $DOWNLOADED
- [[ "$DOWNLOADED" =~ ".zip" ]] && unzip $DOWNLOADED
- cd "$name"-*/
- "python$PYTHON2_VERSION" setup.py $DASHQ_UNLESS_DEBUG egg_info build
- chmod -R go+rX .
- set +e
- fpm_build . "$outname" "" "$pkgtype" "$version" --iteration "$iteration" "${extra_arr[@]}"
- # The upload step uses the package timestamp to determine
- # if it is new. --no-clobber plays nice with that.
- mv --no-clobber "$outname"*.$FORMAT "$WORKSPACE/packages/$TARGET"
- )
- if [ 0 != "$?" ]; then
- echo "ERROR: $name build process failed"
- EXITCODE=1
- fi
- if [ -n "$pyfpm_workdir" ]; then
- rm -rf "$pyfpm_workdir"
- fi
- fi
- ;;
- *)
- test_package_presence $outname $version $pkgtype $iteration $arch
- if [[ "$?" == "0" ]]; then
- fpm_build "$name" "$outname" "" "$pkgtype" "$version" --iteration "$iteration" "${extra_arr[@]}"
- fi
- ;;
- esac
-
-done <`dirname "$(readlink -f "$0")"`"/build.list"
-
-# Build the API server package
-test_rails_package_presence arvados-api-server "$WORKSPACE/services/api"
-if [[ "$?" == "0" ]]; then
- handle_rails_package arvados-api-server "$WORKSPACE/services/api" \
- "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
- --description="Arvados API server - Arvados is a free and open source platform for big data science." \
- --license="GNU Affero General Public License, version 3.0"
-fi
+# Rails packages
+debug_echo -e "\nRails packages\n"
-# Build the workbench server package
-test_rails_package_presence arvados-workbench "$WORKSPACE/apps/workbench"
-if [[ "$?" == "0" ]] ; then
- (
- set -e
- cd "$WORKSPACE/apps/workbench"
-
- # We need to bundle to be ready even when we build a package without vendor directory
- # because asset compilation requires it.
- bundle install --system >"$STDOUT_IF_DEBUG"
-
- # clear the tmp directory; the asset generation step will recreate tmp/cache/assets,
- # and we want that in the package, so it's easier to not exclude the tmp directory
- # from the package - empty it instead.
- rm -rf tmp
- mkdir tmp
-
- # Set up application.yml and production.rb so that asset precompilation works
- \cp config/application.yml.example config/application.yml -f
- \cp config/environments/production.rb.example config/environments/production.rb -f
- sed -i 's/secret_token: ~/secret_token: xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx/' config/application.yml
- sed -i 's/keep_web_url: false/keep_web_url: exampledotcom/' config/application.yml
-
- RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake npm:install >/dev/null
- RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >/dev/null
-
- # Remove generated configuration files so they don't go in the package.
- rm config/application.yml config/environments/production.rb
- )
-
- if [[ "$?" != "0" ]]; then
- echo "ERROR: Asset precompilation failed"
- EXITCODE=1
- else
- handle_rails_package arvados-workbench "$WORKSPACE/apps/workbench" \
- "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
- --description="Arvados Workbench - Arvados is a free and open source platform for big data science." \
- --license="GNU Affero General Public License, version 3.0"
- fi
-fi
+# The rails api server package
+handle_api_server "$ARCH"
+# The rails workbench package
+handle_workbench "$ARCH"
# clean up temporary GOPATH
rm -rf "$GOPATH"
projects / arvados.git / blobdiff