--debug
Output debug information (default: false)
--target <target>
- Distribution to build packages for (default: debian9)
+ Distribution to build packages for (default: debian10)
--only-build <package>
Build only a specific package (or $ONLY_BUILD from environment)
+--force-build
+ Build even if the package exists upstream or if it has already been
+ built locally
--command
Build command to execute (defaults to the run command defined in the
Docker image)
# set to --no-cache-dir to disable pip caching
CACHE_FLAG=
-MAINTAINER="Ward Vandewege <wvandewege@veritasgenetics.com>"
-VENDOR="Veritas Genetics, Inc."
+MAINTAINER="Arvados Package Maintainers <packaging@arvados.org>"
+VENDOR="The Arvados Project"
# End of user configuration
DEBUG=${ARVADOS_DEBUG:-0}
+FORCE_BUILD=${FORCE_BUILD:-0}
EXITCODE=0
-TARGET=debian9
+TARGET=debian10
COMMAND=
PARSEDOPTS=$(getopt --name "$0" --longoptions \
- help,build-bundle-packages,debug,target:,only-build: \
+ help,build-bundle-packages,debug,target:,only-build:,force-build \
-- "" "$@")
if [ $? -ne 0 ]; then
exit 1
--only-build)
ONLY_BUILD="$2"; shift
;;
+ --force-build)
+ FORCE_BUILD=1
+ ;;
--debug)
DEBUG=1
;;
PYTHON2_INSTALL_LIB=lib/python$PYTHON2_VERSION/site-packages
PYTHON3_PACKAGE=$(rpm -qf "$(which python$PYTHON3_VERSION)" --queryformat '%{NAME}\n')
PYTHON3_PKG_PREFIX=$PYTHON3_PACKAGE
- PYTHON3_PREFIX=/opt/rh/rh-python35/root/usr
+ PYTHON3_PREFIX=/opt/rh/rh-python36/root/usr
PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/site-packages
export PYCURL_SSL_LIBRARY=nss
;;
exit 1
fi
-PYTHON2_FPM_INSTALLER=(--python-easyinstall "$(find_python_program easy_install-$PYTHON2_VERSION easy_install)")
-install3=$(find_python_program easy_install-$PYTHON3_VERSION easy_install3 pip-$PYTHON3_VERSION pip3)
-if [[ $install3 =~ easy_ ]]; then
- PYTHON3_FPM_INSTALLER=(--python-easyinstall "$install3")
-else
- PYTHON3_FPM_INSTALLER=(--python-pip "$install3")
-fi
-
RUN_BUILD_PACKAGES_PATH="`dirname \"$0\"`"
RUN_BUILD_PACKAGES_PATH="`( cd \"$RUN_BUILD_PACKAGES_PATH\" && pwd )`" # absolutized and normalized
if [ -z "$RUN_BUILD_PACKAGES_PATH" ] ; then
# Go binaries
cd $WORKSPACE/packages/$TARGET
export GOPATH=$(mktemp -d)
-go get github.com/kardianos/govendor
package_go_binary cmd/arvados-client arvados-client \
"Arvados command line tool (beta)"
package_go_binary cmd/arvados-server arvados-server \
"Arvados cluster controller daemon"
package_go_binary cmd/arvados-server arvados-dispatch-cloud \
"Arvados cluster cloud dispatch"
-package_go_binary sdk/go/crunchrunner crunchrunner \
- "Crunchrunner executes a command inside a container and uploads the output"
package_go_binary services/arv-git-httpd arvados-git-httpd \
"Provide authenticated http access to Arvados-hosted git repositories"
package_go_binary services/crunch-dispatch-local crunch-dispatch-local \
"Dispatch Crunch containers on the local system"
package_go_binary services/crunch-dispatch-slurm crunch-dispatch-slurm \
"Dispatch Crunch containers to a SLURM cluster"
-package_go_binary services/crunch-run crunch-run \
+package_go_binary cmd/arvados-server crunch-run \
"Supervise a single Crunch container"
package_go_binary services/crunchstat crunchstat \
"Gather cpu/memory/network statistics of running Crunch jobs"
"Keep storage daemon, accessible to clients on the LAN"
package_go_binary services/keep-web keep-web \
"Static web hosting service for user data stored in Arvados Keep"
-package_go_binary services/ws arvados-ws \
+package_go_binary cmd/arvados-server arvados-ws \
"Arvados Websocket server"
package_go_binary tools/sync-groups arvados-sync-groups \
"Synchronize remote groups into Arvados from an external source"
"Copy all data from one set of Keep servers to another"
package_go_binary tools/keep-exercise keep-exercise \
"Performance testing tool for Arvados Keep"
+package_go_so lib/pam pam_arvados.so libpam-arvados-go \
+ "Arvados PAM authentication module"
# The Python SDK - Should be built first because it's needed by others
fpm_build_virtualenv "arvados-python-client" "sdk/python"
-# Arvados cwl runner
-fpm_build_virtualenv "arvados-cwl-runner" "sdk/cwl"
+# The Python SDK - Python3 package
+fpm_build_virtualenv "arvados-python-client" "sdk/python" "python3"
+
+# Arvados cwl runner - Only supports Python3 now
+fpm_build_virtualenv "arvados-cwl-runner" "sdk/cwl" "python3"
# The PAM module
fpm_build_virtualenv "libpam-arvados" "sdk/pam"
# The FUSE driver
fpm_build_virtualenv "arvados-fuse" "services/fuse"
+# The FUSE driver - Python3 package
+fpm_build_virtualenv "arvados-fuse" "services/fuse" "python3"
+
# The node manager
fpm_build_virtualenv "arvados-node-manager" "services/nodemanager"
# The Arvados crunchstat-summary tool
fpm_build_virtualenv "crunchstat-summary" "tools/crunchstat-summary"
-# The Python SDK - Python3 package
-fpm_build_virtualenv "arvados-python-client" "sdk/python" "python3"
-
# The Docker image cleaner
fpm_build_virtualenv "arvados-docker-cleaner" "services/dockercleaner" "python3"
rm -rf "$WORKSPACE/cwltest"
fi
git clone https://github.com/common-workflow-language/cwltest.git
+# last release to support python 2.7
+(cd cwltest && git checkout 1.0.20190906212748)
# signal to our build script that we want a cwltest executable installed in /usr/bin/
mkdir cwltest/bin && touch cwltest/bin/cwltest
fpm_build_virtualenv "cwltest" "cwltest"
rm -rf "$WORKSPACE/cwltest"
+calculate_go_package_version arvados_server_version cmd/arvados-server
+arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
+
# Build the API server package
test_rails_package_presence arvados-api-server "$WORKSPACE/services/api"
if [[ "$?" == "0" ]]; then
handle_rails_package arvados-api-server "$WORKSPACE/services/api" \
"$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
--description="Arvados API server - Arvados is a free and open source platform for big data science." \
- --license="GNU Affero General Public License, version 3.0"
+ --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
fi
# Build the workbench server package
if [[ "$?" == "0" ]] ; then
(
set -e
+
+ # The workbench package has a build-time dependency on the arvados-server
+ # package for config manipulation, so install it first.
+ cd $WORKSPACE/cmd/arvados-server
+ get_complete_package_name arvados_server_pkgname arvados-server ${arvados_server_version} go
+
+ arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/${arvados_server_pkgname}"
+ if [[ ! -e ${arvados_server_pkg_path} ]]; then
+ arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/processed/${arvados_server_pkgname}"
+ fi
+ if [[ "$FORMAT" == "deb" ]]; then
+ dpkg -i ${arvados_server_pkg_path}
+ else
+ rpm -i ${arvados_server_pkg_path}
+ fi
+
cd "$WORKSPACE/apps/workbench"
# We need to bundle to be ready even when we build a package without vendor directory
mv /tmp/x /etc/arvados/config.yml
perl -p -i -e 'BEGIN{undef $/;} s/WebDAV(.*?):\n( *)ExternalURL: ""/WebDAV$1:\n$2ExternalURL: "example.com"/g' /etc/arvados/config.yml
- RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake npm:install >/dev/null
- RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >/dev/null
+ RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake npm:install >"$STDOUT_IF_DEBUG"
+ RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >"$STDOUT_IF_DEBUG"
# Remove generated configuration files so they don't go in the package.
rm -rf /etc/arvados/
handle_rails_package arvados-workbench "$WORKSPACE/apps/workbench" \
"$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
--description="Arvados Workbench - Arvados is a free and open source platform for big data science." \
- --license="GNU Affero General Public License, version 3.0"
+ --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
fi
fi
projects / arvados.git / blobdiff