end
def current_api_host
- Rails.configuration.arvados_v1_base.gsub /https?:\/\/|\/arvados\/v1/,''
+ if Rails.configuration.Services.Controller.ExternalURL.port == 443
+ "#{Rails.configuration.Services.Controller.ExternalURL.hostname}"
+ else
+ "#{Rails.configuration.Services.Controller.ExternalURL.hostname}:#{Rails.configuration.Services.Controller.ExternalURL.port}"
+ end
+ end
+
+ def current_uuid_prefix
+ Rails.configuration.ClusterID
end
def render_markup(markup)
end
def human_readable_bytes_html(n)
- return h(n) unless n.is_a? Fixnum
+ return h(n) unless n.is_a? Integer
return "0 bytes" if (n == 0)
orders = {
display_value = link.name
elsif value_info[:link_name]
display_value = value_info[:link_name]
- elsif value_info[:selection_name]
- display_value = value_info[:selection_name]
+ elsif (sn = value_info[:selection_name]) && sn != ""
+ display_value = sn
end
end
if (attr == :components) and (subattr.size > 2)
def cwl_inputs_required(object, inputs_schema, set_attr_path)
r = 0
inputs_schema.each do |input|
- required, primary_type, param_id = cwl_input_info(input)
- dn, attrvalue = cwl_input_value(object, input, set_attr_path + [param_id])
+ required, _, param_id = cwl_input_info(input)
+ _, attrvalue = cwl_input_value(object, input, set_attr_path + [param_id])
r += 1 if required and attrvalue.nil?
end
r
chooser_title = "Choose a #{primary_type == 'Directory' ? 'dataset' : 'file'}:"
selection_param = object.class.to_s.underscore + dn
if attrvalue.is_a? Hash
- display_value = attrvalue[:"arv:collection"] || attrvalue[:location]
+ display_value = attrvalue[:"http://arvados.org/cwl#collectionUUID"] || attrvalue[:"arv:collection"] || attrvalue[:location]
re = CollectionsHelper.match_uuid_with_optional_filepath(display_value)
+ locationre = CollectionsHelper.match(attrvalue[:location][5..-1])
if re
- if re[4]
- display_value = "#{Collection.find(re[1]).name} / #{re[4][1..-1]}"
+ if locationre and locationre[4]
+ display_value = "#{Collection.find(re[1]).name} / #{locationre[4][1..-1]}"
else
display_value = Collection.find(re[1]).name
end
render_runtime duration, use_words, round_to_min
end
- # Keep locators are expected to be of the form \"...<pdh/file_path>\"
- JSON_KEEP_LOCATOR_REGEXP = /([0-9a-f]{32}\+\d+[^'"]*?)(?=['"]|\z|$)/
+ # Keep locators are expected to be of the form \"...<pdh/file_path>\" or \"...<uuid/file_path>\"
+ JSON_KEEP_LOCATOR_REGEXP = /([0-9a-f]{32}\+\d+[^'"]*|[a-z0-9]{5}-4zz18-[a-z0-9]{15}[^'"]*)(?=['"]|\z|$)/
def keep_locator_in_json str
# Return a list of all matches
str.scan(JSON_KEEP_LOCATOR_REGEXP).flatten
private
def is_textile?( object, attr )
- is_textile = object.textile_attributes.andand.include?(attr)
+ object.textile_attributes.andand.include?(attr)
end
end