@objects = @objects.filter(@filters).limit(@limit).offset(@offset)
end
+ def render_index
+ respond_to do |f|
+ f.json { render json: @objects }
+ f.html {
+ if params['tab_pane']
+ comparable = self.respond_to? :compare
+ render(partial: 'show_' + params['tab_pane'].downcase,
+ locals: { comparable: comparable, objects: @objects })
+ else
+ render
+ end
+ }
+ f.js { render }
+ end
+ end
+
+ def index
+ find_objects_for_index if !@objects
+ render_index
+ end
+
helper_method :next_page_offset
def next_page_offset
if @objects.respond_to?(:result_offset) and
end
end
- def index
- find_objects_for_index if !@objects
- respond_to do |f|
- f.json { render json: @objects }
- f.html { render }
- f.js { render }
- end
- end
-
def show
if !@object
return render_not_found("object not found")
respond_to do |f|
f.json { render json: @object.attributes.merge(href: url_for(@object)) }
f.html {
- if request.method.in? ['GET', 'HEAD']
+ if params['tab_pane']
+ comparable = self.respond_to? :compare
+ render(partial: 'show_' + params['tab_pane'].downcase,
+ locals: { comparable: comparable, objects: @objects })
+ elsif request.method.in? ['GET', 'HEAD']
render
else
redirect_to params[:return_to] || @object
@new_resource_attrs ||= params[model_class.to_s.underscore.singularize]
@new_resource_attrs ||= {}
@new_resource_attrs.reject! { |k,v| k.to_s == 'uuid' }
- @object ||= model_class.new @new_resource_attrs
- @object.save!
- show
+ @object ||= model_class.new @new_resource_attrs, params["options"]
+ if @object.save
+ respond_to do |f|
+ f.json { render json: @object.attributes.merge(href: url_for(@object)) }
+ f.html {
+ redirect_to @object
+ }
+ f.js { render }
+ end
+ else
+ self.render_error status: 422
+ end
end
# Clone the given object, merging any attribute values supplied as
end
def current_user
+ return Thread.current[:user] if Thread.current[:user]
+
if Thread.current[:arvados_api_token]
- Thread.current[:user] ||= User.current
+ if session[:user]
+ if session[:user][:is_active] != true
+ Thread.current[:user] = User.current
+ else
+ Thread.current[:user] = User.new(session[:user])
+ end
+ else
+ Thread.current[:user] = User.current
+ end
else
logger.error "No API token in Thread"
return nil
# call to verify its authenticity.
if verify_api_token
session[:arvados_api_token] = params[:api_token]
+ u = User.current
+ session[:user] = {
+ uuid: u.uuid,
+ email: u.email,
+ first_name: u.first_name,
+ last_name: u.last_name,
+ is_active: u.is_active,
+ is_admin: u.is_admin,
+ prefs: u.prefs
+ }
if !request.format.json? and request.method.in? ['GET', 'HEAD']
# Repeat this request with api_token in the (new) session
# cookie instead of the query string. This prevents API
}
def check_user_notifications
+ return if params['tab_pane']
+
@notification_count = 0
@notifications = []
nil
end
end
+
+ # helper method to get links for given object or uuid
+ helper_method :links_for_object
+ def links_for_object object_or_uuid
+ raise ArgumentError, 'No input argument' unless object_or_uuid
+ preload_links_for_objects([object_or_uuid])
+ uuid = object_or_uuid.is_a?(String) ? object_or_uuid : object_or_uuid.uuid
+ @all_links_for[uuid] ||= []
+ end
+
+ # helper method to preload links for given objects and uuids
+ helper_method :preload_links_for_objects
+ def preload_links_for_objects objects_and_uuids
+ @all_links_for ||= {}
+
+ raise ArgumentError, 'Argument is not an array' unless objects_and_uuids.is_a? Array
+ return @all_links_for if objects_and_uuids.empty?
+
+ uuids = objects_and_uuids.collect { |x| x.is_a?(String) ? x : x.uuid }
+
+ # if already preloaded for all of these uuids, return
+ if not uuids.select { |x| @all_links_for[x].nil? }.any?
+ return @all_links_for
+ end
+
+ uuids.each do |x|
+ @all_links_for[x] = []
+ end
+
+ # TODO: make sure we get every page of results from API server
+ Link.filter([['head_uuid', 'in', uuids]]).each do |link|
+ @all_links_for[link.head_uuid] << link
+ end
+ @all_links_for
+ end
+
+ # helper method to get a certain number of objects of a specific type
+ # this can be used to replace any uses of: "dataclass.limit(n)"
+ helper_method :get_n_objects_of_class
+ def get_n_objects_of_class dataclass, size
+ @objects_map_for ||= {}
+
+ raise ArgumentError, 'Argument is not a data class' unless dataclass.is_a? Class
+ raise ArgumentError, 'Argument is not a valid limit size' unless (size && size>0)
+
+ # if the objects_map_for has a value for this dataclass, and the
+ # size used to retrieve those objects is equal, return it
+ size_key = "#{dataclass.name}_size"
+ if @objects_map_for[dataclass.name] && @objects_map_for[size_key] &&
+ (@objects_map_for[size_key] == size)
+ return @objects_map_for[dataclass.name]
+ end
+
+ @objects_map_for[size_key] = size
+ @objects_map_for[dataclass.name] = dataclass.limit(size)
+ end
+
+ # helper method to get collections for the given uuid
+ helper_method :collections_for_object
+ def collections_for_object uuid
+ raise ArgumentError, 'No input argument' unless uuid
+ preload_collections_for_objects([uuid])
+ @all_collections_for[uuid] ||= []
+ end
+
+ # helper method to preload collections for the given uuids
+ helper_method :preload_collections_for_objects
+ def preload_collections_for_objects uuids
+ @all_collections_for ||= {}
+
+ raise ArgumentError, 'Argument is not an array' unless uuids.is_a? Array
+ return @all_collections_for if uuids.empty?
+
+ # if already preloaded for all of these uuids, return
+ if not uuids.select { |x| @all_collections_for[x].nil? }.any?
+ return @all_collections_for
+ end
+
+ uuids.each do |x|
+ @all_collections_for[x] = []
+ end
+
+ # TODO: make sure we get every page of results from API server
+ Collection.where(uuid: uuids).each do |collection|
+ @all_collections_for[collection.uuid] << collection
+ end
+ @all_collections_for
+ end
+
+ # helper method to get log collections for the given log
+ helper_method :log_collections_for_object
+ def log_collections_for_object log
+ raise ArgumentError, 'No input argument' unless log
+
+ preload_log_collections_for_objects([log])
+
+ uuid = log
+ fixup = /([a-f0-9]{32}\+\d+)(\+?.*)/.match(log)
+ if fixup && fixup.size>1
+ uuid = fixup[1]
+ end
+
+ @all_log_collections_for[uuid] ||= []
+ end
+
+ # helper method to preload collections for the given uuids
+ helper_method :preload_log_collections_for_objects
+ def preload_log_collections_for_objects logs
+ @all_log_collections_for ||= {}
+
+ raise ArgumentError, 'Argument is not an array' unless logs.is_a? Array
+ return @all_log_collections_for if logs.empty?
+
+ uuids = []
+ logs.each do |log|
+ fixup = /([a-f0-9]{32}\+\d+)(\+?.*)/.match(log)
+ if fixup && fixup.size>1
+ uuids << fixup[1]
+ else
+ uuids << log
+ end
+ end
+
+ # if already preloaded for all of these uuids, return
+ if not uuids.select { |x| @all_log_collections_for[x].nil? }.any?
+ return @all_log_collections_for
+ end
+
+ uuids.each do |x|
+ @all_log_collections_for[x] = []
+ end
+
+ # TODO: make sure we get every page of results from API server
+ Collection.where(uuid: uuids).each do |collection|
+ @all_log_collections_for[collection.uuid] << collection
+ end
+ @all_log_collections_for
+ end
+
+ # helper method to get object of a given dataclass and uuid
+ helper_method :object_for_dataclass
+ def object_for_dataclass dataclass, uuid
+ raise ArgumentError, 'No input argument dataclass' unless (dataclass && uuid)
+ preload_objects_for_dataclass(dataclass, [uuid])
+ @objects_for[uuid]
+ end
+
+ # helper method to preload objects for given dataclass and uuids
+ helper_method :preload_objects_for_dataclass
+ def preload_objects_for_dataclass dataclass, uuids
+ @objects_for ||= {}
+
+ raise ArgumentError, 'Argument is not a data class' unless dataclass.is_a? Class
+ raise ArgumentError, 'Argument is not an array' unless uuids.is_a? Array
+
+ return @objects_for if uuids.empty?
+
+ # if already preloaded for all of these uuids, return
+ if not uuids.select { |x| @objects_for[x].nil? }.any?
+ return @objects_for
+ end
+
+ dataclass.where(uuid: uuids).each do |obj|
+ @objects_for[obj.uuid] = obj
+ end
+ @objects_for
+ end
+
end