"size": 32
},
{
- "checksum": "sha1$83483b9c65d99967aecc794c14f9f4743314d186",
- "location": "sample2_S01_R3_001.fastq.txt",
+ "checksum": "sha1$5f3b4df1b0f7fdced751fc6079778600ad9fdb45",
+ "location": "sample2_S01_R1_001.fastq.txt",
"class": "File",
"size": 32
}
tool: wf/runin-reqs-wf4.cwl
doc: "RunInSingleContainer discovers static resource request in subworkflow steps"
+- job: null
+ output:
+ out: null
+ tool: wf/runin-reqs-wf5.cwl
+ doc: "RunInSingleContainer has minimum 128 MiB RAM"
+
- job: secondaryFiles/inp3.yml
output: {}
tool: secondaryFiles/example1.cwl
output:
out: null
tool: wf-defaults/wf4.cwl
- doc: default in embedded subworkflow missing 'id' field
+ doc: default in embedded subworkflow missing 'id' field, v1.0
should_fail: true
+- job: null
+ output:
+ out: null
+ tool: wf-defaults/wf8.cwl
+ doc: default in embedded subworkflow missing 'id' field, v1.1
+ should_fail: false
+
- job: null
output:
out: null
}
tool: 13931-size.cwl
doc: Test that size is set for files in Keep
+
+- job: 15241-writable-dir-job.json
+ output: {
+ "results": {
+ "basename": "keep:6dd5fa20622d5a7a23c9147d0927da2a+180",
+ "class": "Directory",
+ "listing": [
+ {
+ "basename": "d7514270f356df848477718d58308cc4+94",
+ "class": "Directory",
+ "listing": [
+ {
+ "basename": "a",
+ "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709",
+ "class": "File",
+ "location": "a",
+ "size": 0
+ },
+ {
+ "basename": "blurg.txt",
+ "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709",
+ "class": "File",
+ "location": "blurg.txt",
+ "size": 0
+ },
+ {
+ "basename": "c",
+ "class": "Directory",
+ "listing": [
+ {
+ "basename": "d",
+ "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709",
+ "class": "File",
+ "location": "d",
+ "size": 0
+ }
+ ],
+ "location": "c"
+ },
+ {
+ "basename": "b",
+ "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709",
+ "class": "File",
+ "location": "b",
+ "size": 0
+ }
+ ],
+ "location": "d7514270f356df848477718d58308cc4+94"
+ }
+ ],
+ "location": "keep:6dd5fa20622d5a7a23c9147d0927da2a+180"
+ }
+ }
+ tool: 15241-writable-dir.cwl
+ doc: Test for writable collections
+
+- job: badkeep.yml
+ output: {}
+ should_fail: true
+ tool: 15295-bad-keep-ref.cwl
+ doc: Test checking for invalid keepref
+
+- job: listing-job.yml
+ output: {
+ "out": {
+ "class": "File",
+ "location": "output.txt",
+ "size": 5,
+ "checksum": "sha1$724ba28f4a9a1b472057ff99511ed393a45552e1"
+ }
+ }
+ tool: 16169-no-listing-hint.cwl
+ doc: "Test cwltool:LoadListingRequirement propagation"