+/*
+ * Fetches raw inputs from containerRequest mounts with fallback to properties
+ * Returns undefined if containerRequest not loaded
+ * Returns {} if inputs not found in mounts or props
+ */
+export const getRawInputs = (data: any): WorkflowInputsData | undefined => {
+ if (!data) { return undefined; }
+ const mountInput = data.mounts?.[MOUNT_PATH_CWL_INPUT]?.content;
+ const propsInput = data.properties?.cwl_input;
+ if (!mountInput && !propsInput) { return {}; }
+ return (mountInput || propsInput);
+}
+
+export const getInputs = (data: any): CommandInputParameter[] => {
+ // Definitions from mounts are needed so we return early if missing
+ if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { return []; }
+ const content = getRawInputs(data) as any;
+ // Only escape if content is falsy to allow displaying definitions if no inputs are present
+ // (Don't check raw content length)
+ if (!content) { return []; }
+
+ const inputs = getWorkflowInputs(data.mounts[MOUNT_PATH_CWL_WORKFLOW].content);
+ return inputs ? inputs.map(
+ (it: any) => (
+ {
+ type: it.type,
+ id: it.id,
+ label: it.label,
+ default: content[it.id],
+ value: content[it.id.split('/').pop()] || [],
+ doc: it.doc
+ }
+ )
+ ) : [];
+};
+
+/*
+ * Fetches raw outputs from containerRequest properties
+ * Assumes containerRequest is loaded
+ */
+export const getRawOutputs = (data: any): CommandInputParameter[] | undefined => {
+ if (!data || !data.properties || !data.properties.cwl_output) { return undefined; }
+ return (data.properties.cwl_output);
+}
+
+export type InputCollectionMount = {
+ path: string;
+ pdh: string;
+}
+
+export const getInputCollectionMounts = (data: any): InputCollectionMount[] => {
+ if (!data || !data.mounts) { return []; }
+ return Object.keys(data.mounts)
+ .map(key => ({
+ ...data.mounts[key],
+ path: key,
+ }))
+ .filter(mount => mount.kind === 'collection' &&
+ mount.portable_data_hash &&
+ mount.path)
+ .map(mount => ({
+ path: mount.path,
+ pdh: mount.portable_data_hash,
+ }));
+};
+
+export const getOutputParameters = (data: any): CommandOutputParameter[] => {
+ if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { return []; }
+ const outputs = getWorkflowOutputs(data.mounts[MOUNT_PATH_CWL_WORKFLOW].content);
+ return outputs ? outputs.map(
+ (it: any) => (
+ {
+ type: it.type,
+ id: it.id,
+ label: it.label,
+ doc: it.doc
+ }
+ )
+ ) : [];
+};