#
# SPDX-License-Identifier: AGPL-3.0
-. `dirname "$(readlink -f "$0")"`/libcloud-pin.sh
-
COLUMNS=80
. `dirname "$(readlink -f "$0")"`/run-library.sh
Restrict apiserver tests to the given file
sdk/python_test="--test-suite tests.test_keep_locator"
Restrict Python SDK tests to the given class
-apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
- Restrict Workbench tests to the given file
-services/arv-git-httpd_test="-check.vv"
+services/githttpd_test="-check.vv"
Show all log messages, even when tests pass (also works
with services/keepstore_test etc.)
ARVADOS_DEBUG=1
More information and background:
-https://arvados.org/projects/arvados/wiki/Running_tests
+https://dev.arvados.org/projects/arvados/wiki/Running_tests
Available tests:
-apps/workbench (*)
-apps/workbench_units (*)
-apps/workbench_functionals (*)
-apps/workbench_integration (*)
-apps/workbench_benchmark
-apps/workbench_profile
cmd/arvados-client
+cmd/arvados-package
cmd/arvados-server
doc
lib/cli
lib/pam
lib/service
services/api
-services/arv-git-httpd
-services/crunchstat
+services/githttpd
services/dockercleaner
services/fuse
services/fuse:py3
services/login-sync
services/crunch-dispatch-local
services/crunch-dispatch-slurm
+services/workbench2_units
+services/workbench2_integration
services/ws
sdk/cli
sdk/python
sdk/python:py3
+sdk/ruby-google-api-client
sdk/ruby
sdk/go/arvados
sdk/go/arvadosclient
tools/keep-rsync
tools/keep-block-check
-(*) apps/workbench is shorthand for apps/workbench_units +
- apps/workbench_functionals + apps/workbench_integration
-
EOF
# First make sure to remove any ARVADOS_ variables from the calling
VENV3DIR=
PYTHONPATH=
GEMHOME=
-PERLINSTALLBASE=
R_LIBS=
export LANG=en_US.UTF-8
temp=
temp_preserve=
+ignore_sigint=
+
clear_temp() {
if [[ -z "$temp" ]]; then
# we did not even get as far as making a temp dir
exit_cleanly() {
trap - INT
- if which create-plot-data-from-log.sh >/dev/null; then
- create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
- fi
- rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
stop_services
rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
report_outcomes
find /usr/include -path '*gnutls/gnutls.h' | egrep --max-count=1 . \
|| fatal "No gnutls/gnutls.h. Try: apt-get install libgnutls28-dev"
echo -n 'virtualenv: '
- python3 -m venv -h | egrep --max-count=1 . \
+ python3 -m venv --help | grep -q '^usage: venv ' \
+ && echo "venv module found" \
|| fatal "No virtualenv. Try: apt-get install python3-venv"
echo -n 'Python3 pyconfig.h: '
find /usr/include -path '*/python3*/pyconfig.h' | egrep --max-count=1 . \
echo -n 'nginx: '
PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
|| fatal "No nginx. Try: apt-get install nginx"
- echo -n 'perl: '
- perl -v | grep version \
- || fatal "No perl. Try: apt-get install perl"
- for mod in ExtUtils::MakeMaker JSON LWP Net::SSL; do
- echo -n "perl $mod: "
- perl -e "use $mod; print \"\$$mod::VERSION\\n\"" \
- || fatal "No $mod. Try: apt-get install perl-modules libcrypt-ssleay-perl libjson-perl libwww-perl"
- done
echo -n 'gitolite: '
which gitolite \
|| fatal "No gitolite. Try: apt-get install gitolite3"
echo -n 'npm: '
npm --version \
- || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v10.23.1/node-v10.23.1-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v10.23.1-linux-x64/bin/{node,npm} /usr/local/bin/"
+ || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v12.22.12/node-v12.22.12-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v12.22.12-linux-x64/bin/{node,npm} /usr/local/bin/"
echo -n 'cadaver: '
cadaver --version | grep -w cadaver \
|| fatal "No cadaver. Try: apt-get install cadaver"
|| fatal "No libpam pam_appl.h. Try: apt-get install libpam0g-dev"
echo -n 'postgresql: '
psql --version || fatal "No postgresql. Try: apt-get install postgresql postgresql-client-common"
- echo -n 'phantomjs: '
- phantomjs --version || fatal "No phantomjs. Try: apt-get install phantomjs"
echo -n 'xvfb: '
which Xvfb || fatal "No xvfb. Try: apt-get install xvfb"
echo -n 'graphviz: '
dot -V || fatal "No graphviz. Try: apt-get install graphviz"
- echo -n 'geckodriver: '
- geckodriver --version | grep ^geckodriver || echo "No geckodriver. Try: wget -O- https://github.com/mozilla/geckodriver/releases/download/v0.23.0/geckodriver-v0.23.0-linux64.tar.gz | sudo tar -C /usr/local/bin -xzf - geckodriver"
+ echo -n 'singularity: '
+ singularity --version || fatal "No singularity. Try: arvados-server install"
+ echo -n 'docker client: '
+ docker --version || echo "No docker client. Try: arvados-server install"
+ echo -n 'docker server: '
+ docker info --format='{{.ServerVersion}}' || echo "No docker server. Try: arvados-server install"
if [[ "$NEED_SDK_R" = true ]]; then
# R SDK stuff
}
rotate_logfile() {
- # i.e. rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
+ # i.e. rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
# $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
if [[ -f "$1/$2" ]]; then
THEDATE=`date +%Y%m%d%H%M%S`
declare -A skip
declare -A only
declare -A testargs
-skip[apps/workbench_profile]=1
while [[ -n "$1" ]]
do
return 0
fi
. "$VENV3DIR/bin/activate"
- echo 'Starting API, controller, keepproxy, keep-web, arv-git-httpd, ws, and nginx ssl proxy...'
+ echo 'Starting API, controller, keepproxy, keep-web, githttpd, ws, and nginx ssl proxy...'
if [[ ! -d "$WORKSPACE/services/api/log" ]]; then
mkdir -p "$WORKSPACE/services/api/log"
fi
&& python3 sdk/python/tests/run_test_server.py start_keep-web \
&& checkpidfile keep-web \
&& checkhealth WebDAV \
- && python3 sdk/python/tests/run_test_server.py start_arv-git-httpd \
- && checkpidfile arv-git-httpd \
+ && python3 sdk/python/tests/run_test_server.py start_githttpd \
+ && checkpidfile githttpd \
&& checkhealth GitHTTP \
&& python3 sdk/python/tests/run_test_server.py start_ws \
&& checkpidfile ws \
. "$VENV3DIR/bin/activate" || return
cd "$WORKSPACE" \
&& python3 sdk/python/tests/run_test_server.py stop_nginx \
- && python3 sdk/python/tests/run_test_server.py stop_arv-git-httpd \
+ && python3 sdk/python/tests/run_test_server.py stop_githttpd \
&& python3 sdk/python/tests/run_test_server.py stop_ws \
&& python3 sdk/python/tests/run_test_server.py stop_keep-web \
&& python3 sdk/python/tests/run_test_server.py stop_keep_proxy \
}
interrupt() {
+ if [[ -n "$ignore_sigint" ]]; then
+ echo >&2 "ignored SIGINT"
+ return
+ fi
failures+=("($(basename $0) interrupted)")
exit_cleanly
}
|| fatal 'rvm gemset setup'
rvm env
- (bundle version | grep -q 2.2.19) || gem install bundler -v 2.2.19
+ (bundle version | grep -q 2.2.19) || gem install --no-document bundler -v 2.2.19
bundle="$(which bundle)"
echo "$bundle"
"$bundle" version | grep 2.2.19 || fatal 'install bundler'
echo "Will install dependencies to $(gem env gemdir)"
echo "Will install bundler and arvados gems to $tmpdir_gem_home"
echo "Gem search path is GEM_PATH=$GEM_PATH"
- bundle="$tmpdir_gem_home/bin/bundle"
+ bundle="bundle"
(
export HOME=$GEMHOME
- bundlers="$(gem list --details bundler)"
versions=(2.2.19)
for v in ${versions[@]}; do
- if ! echo "$bundlers" | fgrep -q "($v)"; then
- gem install --user $(for v in ${versions[@]}; do echo bundler:${v}; done)
+ if ! gem list --installed --version "${v}" bundler >/dev/null; then
+ gem install --no-document --user $(for v in ${versions[@]}; do echo bundler:${v}; done)
break
fi
done
"$bundle" version | tee /dev/stderr | grep -q 'version 2'
) || fatal 'install bundler'
+ if test -d /var/lib/arvados-arvbox/ ; then
+ # Inside arvbox, use bundler-installed binstubs. The
+ # system bundler and rail's own bin/bundle refuse to work.
+ # I don't know why.
+ bundle=binstubs/bundle
+ fi
fi
}
elif [[ -n "$short" ]]; then
return
fi
- "$venvdest/bin/pip3" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
+ "$venvdest/bin/pip3" install --no-cache-dir 'setuptools>=68' 'pip>=20'
}
initialize() {
fi
# Set up temporary install dirs (unless existing dirs were supplied)
- for tmpdir in VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
+ for tmpdir in VENV3DIR GOPATH GEMHOME R_LIBS
do
if [[ -z "${!tmpdir}" ]]; then
eval "$tmpdir"="$temp/$tmpdir"
rm -vf "${WORKSPACE}/tmp/*.log"
- export PERLINSTALLBASE
- export PERL5LIB="$PERLINSTALLBASE/lib/perl5${PERL5LIB:+:$PERL5LIB}"
-
export R_LIBS
export GOPATH
install_env() {
go mod download || fatal "Go deps failed"
- which goimports >/dev/null || go get golang.org/x/tools/cmd/goimports || fatal "Go setup failed"
+ which goimports >/dev/null || go install golang.org/x/tools/cmd/goimports@latest || fatal "Go setup failed"
setup_virtualenv "$VENV3DIR"
. "$VENV3DIR/bin/activate"
- # Needed for run_test_server.py which is used by certain (non-Python) tests.
- # pdoc3 needed to generate the Python SDK documentation.
- (
- set -e
- "${VENV3DIR}/bin/pip3" install wheel
- "${VENV3DIR}/bin/pip3" install PyYAML
- "${VENV3DIR}/bin/pip3" install httplib2
- "${VENV3DIR}/bin/pip3" install future
- "${VENV3DIR}/bin/pip3" install google-api-python-client
- "${VENV3DIR}/bin/pip3" install ciso8601
- "${VENV3DIR}/bin/pip3" install pycurl
- "${VENV3DIR}/bin/pip3" install ws4py
- "${VENV3DIR}/bin/pip3" install pdoc3
- cd "$WORKSPACE/sdk/python"
- python3 setup.py install
- ) || fatal "installing PyYAML and sdk/python failed"
+ # wheel modernizes the venv (as of early 2024) and makes it more closely
+ # match our package build environment.
+ # PyYAML is a test requirement used by run_test_server.py and needed for
+ # other, non-Python tests.
+ # pdoc is needed to build PySDK documentation.
+ # We run `setup.py build` first to generate _version.py.
+ pip install PyYAML pdoc wheel \
+ && env -C "$WORKSPACE/sdk/python" python3 setup.py build \
+ && pip install "$WORKSPACE/sdk/python" \
+ || fatal "installing Python SDK and related dependencies failed"
}
retry() {
do_test() {
case "${1}" in
- apps/workbench_units | apps/workbench_functionals | apps/workbench_integration)
- suite=apps/workbench
+ services/workbench2_units | services/workbench2_integration)
+ suite=services/workbench2
;;
*)
suite="${1}"
stop_services
check_arvados_config "$1"
;;
- gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/sshexecutor | lib/dispatchcloud/worker)
+ gofmt \
+ | cmd/arvados-package \
+ | doc \
+ | lib/boot \
+ | lib/cli \
+ | lib/cloud/azure \
+ | lib/cloud/cloudtest \
+ | lib/cloud/ec2 \
+ | lib/cmd \
+ | lib/dispatchcloud/sshexecutor \
+ | lib/dispatchcloud/worker \
+ | lib/install \
+ | services/workbench2_integration \
+ | services/workbench2_units \
+ )
check_arvados_config "$1"
# don't care whether services are running
;;
go_ldflags() {
version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}
- echo "-X git.arvados.org/arvados.git/lib/cmd.version=${version} -X main.version=${version}"
+ echo "-X git.arvados.org/arvados.git/lib/cmd.version=${version} -X main.version=${version} -s -w"
}
do_test_once() {
then
covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
+ testflags=()
+ if [[ "$1" == "cmd/arvados-package" ]]; then
+ testflags+=("-timeout" "20m")
+ fi
# We do "go install" here to catch compilation errors
# before trying "go test". Otherwise, coverage-reporting
# mode makes Go show the wrong line numbers when reporting
then
# "go test -check.vv giturl" doesn't work, but this
# does:
- go test ${short:+-short} ${testargs[$1]}
+ go test ${short:+-short} ${testflags[@]} ${testargs[$1]}
else
# The above form gets verbose even when testargs is
# empty, so use this form in such cases:
- go test ${short:+-short} ${coverflags[@]} "git.arvados.org/arvados.git/$1"
+ go test ${short:+-short} ${testflags[@]} ${coverflags[@]} "git.arvados.org/arvados.git/$1"
fi
result=${result:-$?}
if [[ -f "$WORKSPACE/tmp/.$covername.tmp" ]]
install_gem arvados sdk/ruby
}
+install_sdk/ruby-google-api-client() {
+ install_gem arvados-google-api-client sdk/ruby-google-api-client
+}
+
install_sdk/R() {
if [[ "$NEED_SDK_R" = true ]]; then
cd "$WORKSPACE/sdk/R" \
fi
}
-install_sdk/perl() {
- cd "$WORKSPACE/sdk/perl" \
- && perl Makefile.PL INSTALL_BASE="$PERLINSTALLBASE" \
- && make install INSTALLDIRS=perl
-}
-
install_sdk/cli() {
install_gem arvados-cli sdk/cli
}
install_services/login-sync() {
+ install_gem arvados-google-api-client sdk/ruby-google-api-client
+ install_gem arvados sdk/ruby
install_gem arvados-login-sync services/login-sync
}
set -ex
cd "$WORKSPACE/services/api"
export RAILS_ENV=test
- if "$bundle" exec rails db:environment:set ; then
- "$bundle" exec rake db:drop
+ if bin/rails db:environment:set ; then
+ bin/rake db:drop
fi
- "$bundle" exec rake db:setup
- "$bundle" exec rake db:fixtures:load
+ bin/rake db:setup
+ bin/rake db:fixtures:load
) || return 1
}
declare -a pythonstuff
pythonstuff=(
+ # The ordering of sdk/python, tools/crunchstat-summary, and
+ # sdk/cwl here is significant. See
+ # https://dev.arvados.org/issues/19744#note-26
sdk/python:py3
+ tools/crunchstat-summary:py3
sdk/cwl:py3
services/dockercleaner:py3
services/fuse:py3
- tools/crunchstat-summary:py3
)
declare -a gostuff
-gostuff=($(cd "$WORKSPACE" && git grep -lw func | grep \\.go | sed -e 's/\/[^\/]*$//' | sort -u))
+gostuff=($(cd "$WORKSPACE" && git ls-files | grep '\.go$' | sed -e 's/\/[^\/]*$//' | sort -u))
-install_apps/workbench() {
- cd "$WORKSPACE/apps/workbench" \
- && mkdir -p tmp/cache \
- && RAILS_ENV=test bundle_install_trylocal \
- && RAILS_ENV=test RAILS_GROUPS=assets "$bundle" exec rake npm:install
+install_services/workbench2() {
+ cd "$WORKSPACE/services/workbench2" \
+ && make yarn-install ARVADOS_DIRECTORY="${WORKSPACE}"
}
test_doc() {
- (
- set -e
- cd "$WORKSPACE/doc"
- ARVADOS_API_HOST=pirca.arvadosapi.com
- # Make sure python-epydoc is installed or the next line won't
- # do much good!
- PYTHONPATH=$WORKSPACE/sdk/python/ "$bundle" exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
- )
+ local arvados_api_host=pirca.arvadosapi.com && \
+ env -C "$WORKSPACE/doc" \
+ "$bundle" exec rake linkchecker \
+ arvados_api_host="$arvados_api_host" \
+ arvados_workbench_host="https://workbench.$arvados_api_host" \
+ baseurl="file://$WORKSPACE/doc/.site/" \
+ ${testargs[doc]}
}
test_gofmt() {
cd "$WORKSPACE" || return 1
dirs=$(ls -d */ | egrep -v 'vendor|tmp')
[[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
+ go vet -composites=false ./...
}
test_services/api() {
&& "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
}
+test_sdk/ruby-google-api-client() {
+ echo "*** note \`test sdk/ruby-google-api-client\` does not actually run any tests, see https://dev.arvados.org/issues/20993 ***"
+ true
+}
+
test_sdk/R() {
if [[ "$NEED_SDK_R" = true ]]; then
cd "$WORKSPACE/sdk/R" \
&& "$bundle" exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
}
-test_apps/workbench_units() {
- local TASK="test:units"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
+test_services/workbench2_units() {
+ cd "$WORKSPACE/services/workbench2" && make unit-tests ARVADOS_DIRECTORY="${WORKSPACE}" WORKSPACE="$(pwd)" ${testargs[services/workbench2]}
}
-test_apps/workbench_functionals() {
- local TASK="test:functionals"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
-}
-
-test_apps/workbench_integration() {
- local TASK="test:integration"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
-}
-
-test_apps/workbench_benchmark() {
- local TASK="test:benchmark"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
-}
-
-test_apps/workbench_profile() {
- local TASK="test:profile"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_profile]}
+test_services/workbench2_integration() {
+ cd "$WORKSPACE/services/workbench2" && make integration-tests ARVADOS_DIRECTORY="${WORKSPACE}" WORKSPACE="$(pwd)" ${testargs[services/workbench2]}
}
install_deps() {
# Install parts needed by test suites
do_install env
do_install cmd/arvados-server go
- do_install sdk/cli
- do_install sdk/perl
do_install sdk/python pip "${VENV3DIR}/bin/"
+ do_install tools/crunchstat-summary pip "${VENV3DIR}/bin/"
+ do_install sdk/ruby-google-api-client
do_install sdk/ruby
+ do_install sdk/cli
do_install services/api
- do_install services/arv-git-httpd go
+ # lib/controller integration tests depend on arv-mount to run
+ # containers.
+ do_install services/fuse pip "${VENV3DIR}/bin/"
do_install services/keepproxy go
- do_install services/keepstore go
do_install services/keep-web go
- do_install services/ws go
}
install_all() {
do_install env
do_install doc
+ do_install sdk/ruby-google-api-client
do_install sdk/ruby
do_install sdk/R
- do_install sdk/perl
do_install sdk/cli
do_install services/login-sync
for p in "${pythonstuff[@]}"
do_install "$g" go
done
do_install services/api
- do_install apps/workbench
+ do_install services/workbench2
}
test_all() {
do_test gofmt
do_test doc
+ do_test sdk/ruby-google-api-client
do_test sdk/ruby
do_test sdk/R
do_test sdk/cli
do
do_test "$g" go
done
- do_test apps/workbench_units
- do_test apps/workbench_functionals
- do_test apps/workbench_integration
- do_test apps/workbench_benchmark
- do_test apps/workbench_profile
+ do_test services/workbench2_units
+ do_test services/workbench2_integration
}
test_go() {
testfuncargs["sdk/cli"]="sdk/cli"
testfuncargs["sdk/R"]="sdk/R"
testfuncargs["sdk/java-v2"]="sdk/java-v2"
-testfuncargs["apps/workbench_units"]="apps/workbench_units"
-testfuncargs["apps/workbench_functionals"]="apps/workbench_functionals"
-testfuncargs["apps/workbench_integration"]="apps/workbench_integration"
-testfuncargs["apps/workbench_benchmark"]="apps/workbench_benchmark"
-testfuncargs["apps/workbench_profile"]="apps/workbench_profile"
if [[ -z ${interactive} ]]; then
install_all
setnextcmd
HISTFILE="$WORKSPACE/tmp/.history"
history -r
+ ignore_sigint=1
while read -p 'What next? ' -e -i "$nextcmd" nextcmd; do
history -s "$nextcmd"
history -w
projects / arvados.git / blobdiff