Restrict apiserver tests to the given file
sdk/python_test="--test-suite tests.test_keep_locator"
Restrict Python SDK tests to the given class
-apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
- Restrict Workbench tests to the given file
services/githttpd_test="-check.vv"
Show all log messages, even when tests pass (also works
with services/keepstore_test etc.)
Available tests:
-apps/workbench (*)
-apps/workbench_units (*)
-apps/workbench_functionals (*)
-apps/workbench_integration (*)
-apps/workbench_benchmark
-apps/workbench_profile
cmd/arvados-client
cmd/arvados-package
cmd/arvados-server
lib/service
services/api
services/githttpd
-services/crunchstat
services/dockercleaner
services/fuse
services/fuse:py3
services/login-sync
services/crunch-dispatch-local
services/crunch-dispatch-slurm
+services/workbench2_units
+services/workbench2_integration
services/ws
sdk/cli
sdk/python
sdk/python:py3
+sdk/ruby-google-api-client
sdk/ruby
sdk/go/arvados
sdk/go/arvadosclient
tools/keep-rsync
tools/keep-block-check
-(*) apps/workbench is shorthand for apps/workbench_units +
- apps/workbench_functionals + apps/workbench_integration
-
EOF
# First make sure to remove any ARVADOS_ variables from the calling
VENV3DIR=
PYTHONPATH=
GEMHOME=
-PERLINSTALLBASE=
R_LIBS=
export LANG=en_US.UTF-8
exit_cleanly() {
trap - INT
- if which create-plot-data-from-log.sh >/dev/null; then
- create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
- fi
- rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
stop_services
rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
report_outcomes
find /usr/include -path '*gnutls/gnutls.h' | egrep --max-count=1 . \
|| fatal "No gnutls/gnutls.h. Try: apt-get install libgnutls28-dev"
echo -n 'virtualenv: '
- python3 -m venv -h | egrep --max-count=1 . \
+ python3 -m venv --help | grep -q '^usage: venv ' \
+ && echo "venv module found" \
|| fatal "No virtualenv. Try: apt-get install python3-venv"
echo -n 'Python3 pyconfig.h: '
find /usr/include -path '*/python3*/pyconfig.h' | egrep --max-count=1 . \
echo -n 'nginx: '
PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
|| fatal "No nginx. Try: apt-get install nginx"
- echo -n 'perl: '
- perl -v | grep version \
- || fatal "No perl. Try: apt-get install perl"
- for mod in ExtUtils::MakeMaker JSON LWP Net::SSL; do
- echo -n "perl $mod: "
- perl -e "use $mod; print \"\$$mod::VERSION\\n\"" \
- || fatal "No $mod. Try: apt-get install perl-modules libcrypt-ssleay-perl libjson-perl libwww-perl"
- done
echo -n 'gitolite: '
which gitolite \
|| fatal "No gitolite. Try: apt-get install gitolite3"
echo -n 'npm: '
npm --version \
- || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v10.23.1/node-v10.23.1-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v10.23.1-linux-x64/bin/{node,npm} /usr/local/bin/"
+ || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v12.22.12/node-v12.22.12-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v12.22.12-linux-x64/bin/{node,npm} /usr/local/bin/"
echo -n 'cadaver: '
cadaver --version | grep -w cadaver \
|| fatal "No cadaver. Try: apt-get install cadaver"
|| fatal "No libpam pam_appl.h. Try: apt-get install libpam0g-dev"
echo -n 'postgresql: '
psql --version || fatal "No postgresql. Try: apt-get install postgresql postgresql-client-common"
- echo -n 'phantomjs: '
- phantomjs --version || fatal "No phantomjs. Try: apt-get install phantomjs"
echo -n 'xvfb: '
which Xvfb || fatal "No xvfb. Try: apt-get install xvfb"
echo -n 'graphviz: '
dot -V || fatal "No graphviz. Try: apt-get install graphviz"
- echo -n 'geckodriver: '
- geckodriver --version | grep ^geckodriver || echo "No geckodriver. Try: arvados-server install"
echo -n 'singularity: '
singularity --version || fatal "No singularity. Try: arvados-server install"
echo -n 'docker client: '
}
rotate_logfile() {
- # i.e. rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
+ # i.e. rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
# $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
if [[ -f "$1/$2" ]]; then
THEDATE=`date +%Y%m%d%H%M%S`
declare -A skip
declare -A only
declare -A testargs
-skip[apps/workbench_profile]=1
while [[ -n "$1" ]]
do
elif [[ -n "$short" ]]; then
return
fi
- "$venvdest/bin/pip3" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
+ "$venvdest/bin/pip3" install --no-cache-dir 'setuptools>=68' 'pip>=20'
}
initialize() {
fi
# Set up temporary install dirs (unless existing dirs were supplied)
- for tmpdir in VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
+ for tmpdir in VENV3DIR GOPATH GEMHOME R_LIBS
do
if [[ -z "${!tmpdir}" ]]; then
eval "$tmpdir"="$temp/$tmpdir"
rm -vf "${WORKSPACE}/tmp/*.log"
- export PERLINSTALLBASE
- export PERL5LIB="$PERLINSTALLBASE/lib/perl5${PERL5LIB:+:$PERL5LIB}"
-
export R_LIBS
export GOPATH
setup_virtualenv "$VENV3DIR"
. "$VENV3DIR/bin/activate"
- # Needed for run_test_server.py which is used by certain (non-Python) tests.
- # pdoc3 needed to generate the Python SDK documentation.
- (
- set -e
- "${VENV3DIR}/bin/pip3" install wheel
- "${VENV3DIR}/bin/pip3" install PyYAML
- "${VENV3DIR}/bin/pip3" install httplib2
- "${VENV3DIR}/bin/pip3" install future
- "${VENV3DIR}/bin/pip3" install google-api-python-client
- "${VENV3DIR}/bin/pip3" install ciso8601
- "${VENV3DIR}/bin/pip3" install pycurl
- "${VENV3DIR}/bin/pip3" install ws4py
- "${VENV3DIR}/bin/pip3" install pdoc3
- cd "$WORKSPACE/sdk/python"
- python3 setup.py install
- ) || fatal "installing PyYAML and sdk/python failed"
+ # PyYAML is a test requirement used by run_test_server.py and needed for
+ # other, non-Python tests.
+ # pdoc is needed to build PySDK documentation.
+ # We run `setup.py build` first to generate _version.py.
+ env -C "$WORKSPACE/sdk/python" python3 setup.py build \
+ && python3 -m pip install "$WORKSPACE/sdk/python" \
+ && python3 -m pip install PyYAML pdoc \
+ || fatal "installing Python SDK and related dependencies failed"
}
retry() {
do_test() {
case "${1}" in
- apps/workbench_units | apps/workbench_functionals | apps/workbench_integration)
- suite=apps/workbench
+ services/workbench2_units | services/workbench2_integration)
+ suite=services/workbench2
;;
*)
suite="${1}"
stop_services
check_arvados_config "$1"
;;
- gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/sshexecutor | lib/dispatchcloud/worker)
+ gofmt \
+ | cmd/arvados-package \
+ | doc \
+ | lib/boot \
+ | lib/cli \
+ | lib/cloud/azure \
+ | lib/cloud/cloudtest \
+ | lib/cloud/ec2 \
+ | lib/cmd \
+ | lib/dispatchcloud/sshexecutor \
+ | lib/dispatchcloud/worker \
+ | lib/install \
+ | services/workbench2_integration \
+ | services/workbench2_units \
+ )
check_arvados_config "$1"
# don't care whether services are running
;;
install_gem arvados sdk/ruby
}
+install_sdk/ruby-google-api-client() {
+ install_gem arvados-google-api-client sdk/ruby-google-api-client
+}
+
install_sdk/R() {
if [[ "$NEED_SDK_R" = true ]]; then
cd "$WORKSPACE/sdk/R" \
fi
}
-install_sdk/perl() {
- cd "$WORKSPACE/sdk/perl" \
- && perl Makefile.PL INSTALL_BASE="$PERLINSTALLBASE" \
- && make install INSTALLDIRS=perl
-}
-
install_sdk/cli() {
install_gem arvados-cli sdk/cli
}
install_services/login-sync() {
+ install_gem arvados-google-api-client sdk/ruby-google-api-client
install_gem arvados sdk/ruby
install_gem arvados-login-sync services/login-sync
}
declare -a gostuff
gostuff=($(cd "$WORKSPACE" && git ls-files | grep '\.go$' | sed -e 's/\/[^\/]*$//' | sort -u))
-install_apps/workbench() {
- cd "$WORKSPACE/apps/workbench" \
- && mkdir -p tmp/cache \
- && RAILS_ENV=test bundle_install_trylocal \
- && RAILS_ENV=test RAILS_GROUPS=assets "$bundle" exec rake npm:install
+install_services/workbench2() {
+ cd "$WORKSPACE/services/workbench2" \
+ && make yarn-install ARVADOS_DIRECTORY="${WORKSPACE}"
}
test_doc() {
- (
- set -e
- cd "$WORKSPACE/doc"
- ARVADOS_API_HOST=pirca.arvadosapi.com
- # Make sure python-epydoc is installed or the next line won't
- # do much good!
- PYTHONPATH=$WORKSPACE/sdk/python/ "$bundle" exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
- )
+ local arvados_api_host=pirca.arvadosapi.com && \
+ env -C "$WORKSPACE/doc" \
+ "$bundle" exec rake linkchecker \
+ arvados_api_host="$arvados_api_host" \
+ arvados_workbench_host="https://workbench.$arvados_api_host" \
+ baseurl="file://$WORKSPACE/doc/.site/" \
+ ${testargs[doc]}
}
test_gofmt() {
cd "$WORKSPACE" || return 1
dirs=$(ls -d */ | egrep -v 'vendor|tmp')
[[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
+ go vet -composites=false ./...
}
test_services/api() {
&& "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
}
+test_sdk/ruby-google-api-client() {
+ echo "*** note \`test sdk/ruby-google-api-client\` does not actually run any tests, see https://dev.arvados.org/issues/20993 ***"
+ true
+}
+
test_sdk/R() {
if [[ "$NEED_SDK_R" = true ]]; then
cd "$WORKSPACE/sdk/R" \
&& "$bundle" exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
}
-test_apps/workbench_units() {
- local TASK="test:units"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
-}
-
-test_apps/workbench_functionals() {
- local TASK="test:functionals"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
-}
-
-test_apps/workbench_integration() {
- local TASK="test:integration"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
-}
-
-test_apps/workbench_benchmark() {
- local TASK="test:benchmark"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
+test_services/workbench2_units() {
+ cd "$WORKSPACE/services/workbench2" && make unit-tests ARVADOS_DIRECTORY="${WORKSPACE}" WORKSPACE="$(pwd)" ${testargs[services/workbench2]}
}
-test_apps/workbench_profile() {
- local TASK="test:profile"
- cd "$WORKSPACE/apps/workbench" \
- && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_profile]}
+test_services/workbench2_integration() {
+ cd "$WORKSPACE/services/workbench2" && make integration-tests ARVADOS_DIRECTORY="${WORKSPACE}" WORKSPACE="$(pwd)" ${testargs[services/workbench2]}
}
install_deps() {
do_install env
do_install cmd/arvados-server go
do_install sdk/cli
- do_install sdk/perl
do_install sdk/python pip "${VENV3DIR}/bin/"
+ do_install sdk/ruby-google-api-client
do_install sdk/ruby
do_install services/api
do_install services/keepproxy go
install_all() {
do_install env
do_install doc
+ do_install sdk/ruby-google-api-client
do_install sdk/ruby
do_install sdk/R
- do_install sdk/perl
do_install sdk/cli
do_install services/login-sync
for p in "${pythonstuff[@]}"
do_install "$g" go
done
do_install services/api
- do_install apps/workbench
+ do_install services/workbench2
}
test_all() {
do_test gofmt
do_test doc
+ do_test sdk/ruby-google-api-client
do_test sdk/ruby
do_test sdk/R
do_test sdk/cli
do
do_test "$g" go
done
- do_test apps/workbench_units
- do_test apps/workbench_functionals
- do_test apps/workbench_integration
- do_test apps/workbench_benchmark
- do_test apps/workbench_profile
+ do_test services/workbench2_units
+ do_test services/workbench2_integration
}
test_go() {
testfuncargs["sdk/cli"]="sdk/cli"
testfuncargs["sdk/R"]="sdk/R"
testfuncargs["sdk/java-v2"]="sdk/java-v2"
-testfuncargs["apps/workbench_units"]="apps/workbench_units"
-testfuncargs["apps/workbench_functionals"]="apps/workbench_functionals"
-testfuncargs["apps/workbench_integration"]="apps/workbench_integration"
-testfuncargs["apps/workbench_benchmark"]="apps/workbench_benchmark"
-testfuncargs["apps/workbench_profile"]="apps/workbench_profile"
if [[ -z ${interactive} ]]; then
install_all
projects / arvados.git / blobdiff