3551: Fix source tree layout.

[arvados.git] / doc / _config.yml

diff --git a/doc/_config.yml b/doc/_config.yml
index bf19c95758fc1659f383d095bd50f482b481a0f2..7dc43fa5c164d882f0eb303c24f10f46a08c4cde 100644 (file)
--- a/doc/_config.yml
+++ b/doc/_config.yml
@@ -4,7 +4,7 @@
 # workbench, use /doc here and add a symlink at
 # apps/workbench/public/doc pointing to ../../../doc/.site
 # You can also set these on the command line:
-# $ rake generate baseurl=/example arvados_api_host=example.comA
+# $ rake generate baseurl=/example arvados_api_host=example.com
 
 baseurl:
 arvados_api_host: localhost
@@ -16,30 +16,32 @@ navbar:
   userguide:
     - Getting Started:
       - user/index.html.textile.liquid
+      - user/getting_started/community.html.textile.liquid
+    - Run a pipeline using Workbench:
       - user/getting_started/workbench.html.textile.liquid
-      - user/getting_started/ssh-access.html.textile.liquid
+      - user/tutorials/tutorial-pipeline-workbench.html.textile.liquid
+    - Access an Arvados virtual machine:
+      - user/getting_started/ssh-access-unix.html.textile.liquid
+      - user/getting_started/ssh-access-windows.html.textile.liquid
       - user/getting_started/check-environment.html.textile.liquid
-      - user/getting_started/community.html.textile.liquid
-    - Tutorials:
+      - user/reference/api-tokens.html.textile.liquid
+    - Working with data sets:
       - user/tutorials/tutorial-keep.html.textile.liquid
+      - user/tutorials/tutorial-keep-get.html.textile.liquid
+      - user/tutorials/tutorial-keep-mount.html.textile.liquid
+      - user/topics/keep.html.textile.liquid
+    - Run a pipeline on the command line:
+      - user/topics/running-pipeline-command-line.html.textile.liquid
+      - user/reference/sdk-cli.html.textile.liquid
+    - Develop a new pipeline:
       - user/tutorials/intro-crunch.html.textile.liquid
-      - user/tutorials/tutorial-pipeline-workbench.html.textile.liquid
-      - user/tutorials/tutorial-firstscript.html.textile.liquid
-      - user/tutorials/tutorial-new-pipeline.html.textile.liquid
       - user/tutorials/running-external-program.html.textile.liquid
-    - Intermediate topics:
-      - user/topics/running-pipeline-command-line.html.textile.liquid
-      - user/topics/tutorial-job1.html.textile.liquid
+      - user/tutorials/tutorial-firstscript.html.textile.liquid
       - user/topics/tutorial-job-debug.html.textile.liquid
       - user/topics/tutorial-parallel.html.textile.liquid
-      - user/topics/tutorial-trait-search.html.textile.liquid
-      - user/topics/tutorial-gatk-variantfiltration.html.textile.liquid
-      - user/topics/keep.html.textile.liquid
-    - Examples:
       - user/examples/crunch-examples.html.textile.liquid
-    - Reference:
-      - user/reference/api-tokens.html.textile.liquid
-      - user/reference/sdk-cli.html.textile.liquid
+    - Query the metadata database:
+      - user/topics/tutorial-trait-search.html.textile.liquid
     - Arvados License:
       - user/copying/copying.html.textile.liquid
       - user/copying/agpl-3.0.html
@@ -58,6 +60,8 @@ navbar:
       - sdk/ruby/index.html.textile.liquid
     - Java:
       - sdk/java/index.html.textile.liquid
+    - Go:
+      - sdk/go/index.html.textile.liquid
     - CLI:
       - sdk/cli/index.html.textile.liquid
   api:
@@ -120,6 +124,7 @@ navbar:
     - Docker:
       - install/install-docker.html.textile.liquid
     - Manual installation:
+      - install/install-keep.html.textile.liquid
       - install/install-sso.html.textile.liquid
       - install/install-api-server.html.textile.liquid
       - install/install-workbench-app.html.textile.liquid