Merge branch 'master' into 3296-user-profile

[arvados.git] / apps / workbench / app / controllers / collections_controller.rb

diff --git a/apps/workbench/app/controllers/collections_controller.rb b/apps/workbench/app/controllers/collections_controller.rb
index 064acc689babe5a39db7b3d2ce23cf8e36a05c9d..fd78ddf84062e828ac72489d99398c05dec6c1e9 100644 (file)
--- a/apps/workbench/app/controllers/collections_controller.rb
+++ b/apps/workbench/app/controllers/collections_controller.rb
@@ -1,13 +1,15 @@
 class CollectionsController < ApplicationController
-  skip_around_filter(:thread_with_mandatory_api_token,
+  skip_around_filter(:require_thread_api_token,
                      only: [:show_file, :show_file_links])
   skip_before_filter(:find_object_by_uuid,
                      only: [:provenance, :show_file, :show_file_links])
+  # We depend on show_file to display the user agreement:
+  skip_before_filter :check_user_agreements, only: [:show_file]
 
   RELATION_LIMIT = 5
 
   def show_pane_list
-    %w(Files Attributes Metadata Provenance_graph Used_by JSON API)
+    %w(Files Provenance_graph Used_by Advanced)
   end
 
   def set_persistent
@@ -40,6 +42,22 @@ class CollectionsController < ApplicationController
     end
   end
 
+  def choose
+    params[:limit] ||= 40
+
+    @filters += [['link_class','=','name'],
+                 ['head_uuid','is_a','arvados#collection']]
+
+    @objects = Link
+    find_objects_for_index
+
+    @name_links = @objects
+
+    @objects = Collection.
+      filter([['uuid','in',@name_links.collect(&:head_uuid)]])
+    super
+  end
+
   def index
     if params[:search].andand.length.andand > 0
       tags = Link.where(any: ['contains', params[:search]])
@@ -94,7 +112,7 @@ class CollectionsController < ApplicationController
 
   def show_file_links
     Thread.current[:reader_tokens] = [params[:reader_token]]
-    find_object_by_uuid
+    return if false.equal?(find_object_by_uuid)
     render layout: false
   end
 
@@ -143,10 +161,10 @@ class CollectionsController < ApplicationController
       end
       @output_of = jobs_with.call(output: @object.uuid)
       @log_of = jobs_with.call(log: @object.uuid)
-      folder_links = Link.limit(RELATION_LIMIT).order("modified_at DESC")
+      @project_links = Link.limit(RELATION_LIMIT).order("modified_at DESC")
         .where(head_uuid: @object.uuid, link_class: 'name').results
-      folder_hash = Group.where(uuid: folder_links.map(&:tail_uuid)).to_hash
-      @folders = folder_links.map { |link| folder_hash[link.tail_uuid] }
+      project_hash = Group.where(uuid: @project_links.map(&:tail_uuid)).to_hash
+      @projects = project_hash.values
       @permissions = Link.limit(RELATION_LIMIT).order("modified_at DESC")
         .where(head_uuid: @object.uuid, link_class: 'permission',
                name: 'can_read').results
@@ -158,16 +176,20 @@ class CollectionsController < ApplicationController
         .results.any?
       @search_sharing = search_scopes
     end
-    @prov_svg = ProvenanceHelper::create_provenance_graph(@object.provenance, "provenance_svg",
-                                                          {:request => request,
-                                                            :direction => :bottom_up,
-                                                            :combine_jobs => :script_only}) rescue nil
-    @used_by_svg = ProvenanceHelper::create_provenance_graph(@object.used_by, "used_by_svg",
-                                                             {:request => request,
-                                                               :direction => :top_down,
-                                                               :combine_jobs => :script_only,
-                                                               :pdata_only => true}) rescue nil
 
+    if params["tab_pane"] == "Provenance_graph"
+      @prov_svg = ProvenanceHelper::create_provenance_graph(@object.provenance, "provenance_svg",
+                                                            {:request => request,
+                                                              :direction => :bottom_up,
+                                                              :combine_jobs => :script_only}) rescue nil
+    end
+    if params["tab_pane"] == "Used_by"
+      @used_by_svg = ProvenanceHelper::create_provenance_graph(@object.used_by, "used_by_svg",
+                                                               {:request => request,
+                                                                 :direction => :top_down,
+                                                                 :combine_jobs => :script_only,
+                                                                 :pdata_only => true}) rescue nil
+    end
     super
   end
 
@@ -182,7 +204,7 @@ class CollectionsController < ApplicationController
   helper_method :download_link
 
   def download_link
-    collections_url + "/download/#{@object.uuid}/#{@search_sharing.first.api_token}"
+    collections_url + "/download/#{@object.uuid}/#{@search_sharing.first.api_token}/"
   end
 
   def share
@@ -210,18 +232,14 @@ class CollectionsController < ApplicationController
     # error we encounter, and return nil.
     most_specific_error = [401]
     token_list.each do |api_token|
-      using_specific_api_token(api_token) do
-        begin
+      begin
+        using_specific_api_token(api_token) do
           yield
           return api_token
-        rescue ArvadosApiClient::NotLoggedInException => error
-          status = 401
-        rescue => error
-          status = (error.message =~ /\[API: (\d+)\]$/) ? $1.to_i : nil
-          raise unless [401, 403, 404].include?(status)
         end
-        if status >= most_specific_error.first
-          most_specific_error = [status, error]
+      rescue ArvadosApiClient::ApiError => error
+        if error.api_status >= most_specific_error.first
+          most_specific_error = [error.api_status, error]
         end
       end
     end