var Command cmd.Handler = &installCommand{}
-const goversion = "1.17.7"
+const goversion = "1.20.6"
const (
- rubyversion = "2.7.5"
+ rubyversion = "2.7.7"
bundlerversion = "2.2.19"
- singularityversion = "3.9.9"
+ singularityversion = "3.10.4"
pjsversion = "1.9.8"
geckoversion = "0.24.0"
gradleversion = "5.3.1"
- nodejsversion = "v12.22.11"
+ nodejsversion = "v12.22.12"
devtestDatabasePassword = "insecure_arvados_test"
- workbench2version = "2454ac35292a79594c32a80430740317ed5005cf"
)
//go:embed arvados.service
"default-jre-headless",
"gettext",
"libattr1-dev",
- "libcrypt-ssleay-perl",
"libfuse-dev",
+ "libgbm1", // cypress / workbench2 tests
"libgnutls28-dev",
- "libjson-perl",
"libpam-dev",
"libpcre3-dev",
"libpq-dev",
"libreadline-dev",
"libssl-dev",
- "libwww-perl",
"libxml2-dev",
"libxslt1-dev",
"linkchecker",
if test {
if osv.Debian && osv.Major <= 10 {
pkgs = append(pkgs, "iceweasel")
+ } else if osv.Debian && osv.Major >= 11 {
+ pkgs = append(pkgs, "firefox-esr")
} else {
pkgs = append(pkgs, "firefox")
}
}
if dev || test {
- pkgs = append(pkgs, "squashfs-tools") // for singularity
- pkgs = append(pkgs, "gnupg") // for docker install recipe
+ pkgs = append(pkgs,
+ "libglib2.0-dev", // singularity (conmon)
+ "libseccomp-dev", // singularity (seccomp)
+ "squashfs-tools", // singularity
+ "gnupg") // docker install recipe
}
switch {
case osv.Debian && osv.Major >= 11:
- pkgs = append(pkgs, "g++", "libcurl4", "libcurl4-openssl-dev", "perl-modules-5.32")
+ pkgs = append(pkgs, "g++", "libcurl4", "libcurl4-openssl-dev")
case osv.Debian && osv.Major >= 10:
- pkgs = append(pkgs, "g++", "libcurl4", "libcurl4-openssl-dev", "perl-modules")
+ pkgs = append(pkgs, "g++", "libcurl4", "libcurl4-openssl-dev")
case osv.Debian || osv.Ubuntu:
- pkgs = append(pkgs, "g++", "libcurl3", "libcurl3-openssl-dev", "perl-modules")
+ pkgs = append(pkgs, "g++", "libcurl3", "libcurl3-openssl-dev")
case osv.Centos:
pkgs = append(pkgs, "gcc", "gcc-c++", "libcurl-devel", "postgresql-devel")
}
}
if dev || test {
- if havedockerversion, err := exec.Command("docker", "--version").CombinedOutput(); err == nil {
+ if havedockerversion, err2 := exec.Command("docker", "--version").CombinedOutput(); err2 == nil {
logger.Printf("%s installed, assuming that version is ok", bytes.TrimSuffix(havedockerversion, []byte("\n")))
} else if osv.Debian {
var codename string
codename = "buster"
case 11:
codename = "bullseye"
+ case 12:
+ codename = "bookworm"
default:
err = fmt.Errorf("don't know how to install docker-ce for debian %d", osv.Major)
return 1
err = fmt.Errorf("don't know how to install docker for osversion %v", osv)
return 1
}
+
+ err = inst.runBash(`
+key=fs.inotify.max_user_watches
+min=524288
+if [[ "$(sysctl --values "${key}")" -lt "${min}" ]]; then
+ sysctl "${key}=${min}"
+ # writing sysctl worked, so we should make it permanent
+ echo "${key}=${min}" | tee -a /etc/sysctl.conf
+ sysctl -p
+fi
+`, stdout, stderr)
+ if err != nil {
+ err = fmt.Errorf("couldn't set fs.inotify.max_user_watches value. (Is this a docker container? Fix this on the docker host by adding fs.inotify.max_user_watches=524288 to /etc/sysctl.conf and running `sysctl -p`)")
+ return 1
+ }
}
os.Mkdir("/var/lib/arvados", 0755)
tmp=/var/lib/arvados/tmp/singularity
trap "rm -r ${tmp}" ERR EXIT
cd /var/lib/arvados/tmp
-git clone https://github.com/sylabs/singularity
+git clone --recurse-submodules https://github.com/sylabs/singularity
cd singularity
git checkout v${S}
./mconfig --prefix=/var/lib/arvados
} else {
err = inst.runBash(`
NJS=`+nodejsversion+`
+rm -rf /var/lib/arvados/node-*-linux-x64
wget --progress=dot:giga -O- https://nodejs.org/dist/${NJS}/node-${NJS}-linux-x64.tar.xz | sudo tar -C /var/lib/arvados -xJf -
ln -sfv /var/lib/arvados/node-${NJS}-linux-x64/bin/{node,npm} /usr/local/bin/
`, stdout, stderr)
return 1
}
}
-
- if havewb2version, err := exec.Command("git", "--git-dir=/var/lib/arvados/arvados-workbench2/.git", "log", "-n1", "--format=%H").CombinedOutput(); err == nil && string(havewb2version) == workbench2version+"\n" {
- logger.Print("workbench2 repo is already at " + workbench2version)
- } else {
- err = inst.runBash(`
-V=`+workbench2version+`
-cd /var/lib/arvados
-if [[ ! -e arvados-workbench2 ]]; then
- git clone https://git.arvados.org/arvados-workbench2.git
- cd arvados-workbench2
- git checkout $V
-else
- cd arvados-workbench2
- if ! git checkout $V; then
- git fetch
- git checkout yarn.lock
- git checkout $V
- fi
-fi
-rm -rf build
-`, stdout, stderr)
- if err != nil {
- return 1
- }
- }
-
- if err = inst.runBash(`
-cd /var/lib/arvados/arvados-workbench2
-yarn install
-`, stdout, stderr); err != nil {
- return 1
- }
}
if prod || pkg {
"cmd/arvados-server",
} {
fmt.Fprintf(stderr, "building %s...\n", srcdir)
- cmd := exec.Command("go", "install", "-ldflags", "-X git.arvados.org/arvados.git/lib/cmd.version="+inst.PackageVersion+" -X main.version="+inst.PackageVersion+" -s -w")
+ // -buildvcs=false here avoids a fatal "error
+ // obtaining VCS status" when git refuses to
+ // run (for example) as root in a docker
+ // container using a non-root-owned git tree
+ // mounted from the host -- as in
+ // "arvados-package build".
+ cmd := exec.Command("go", "install", "-buildvcs=false", "-ldflags", "-X git.arvados.org/arvados.git/lib/cmd.version="+inst.PackageVersion+" -X main.version="+inst.PackageVersion+" -s -w")
cmd.Env = append(cmd.Env, os.Environ()...)
cmd.Env = append(cmd.Env, "GOBIN=/var/lib/arvados/bin")
cmd.Dir = filepath.Join(inst.SourcePath, srcdir)
tmp=/var/lib/arvados/tmp/python
python3 -m venv "$v"
. "$v/bin/activate"
-pip3 install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
+pip3 install --no-cache-dir 'setuptools>=68' 'pip>=20'
export ARVADOS_BUILDING_VERSION="`+inst.PackageVersion+`"
for src in "`+inst.SourcePath+`/sdk/python" "`+inst.SourcePath+`/services/fuse"; do
rsync -a --delete-after "$src/" "$tmp/"
// Install workbench2 app to /var/lib/arvados/workbench2/
if err = inst.runBash(`
-cd /var/lib/arvados/arvados-workbench2
-VERSION="`+inst.PackageVersion+`" BUILD_NUMBER=1 GIT_COMMIT="`+workbench2version[:9]+`" yarn build
+cd `+inst.SourcePath+`/services/workbench2
+VERSION="`+inst.PackageVersion+`" BUILD_NUMBER=1 GIT_COMMIT=000000000 yarn build
rsync -a --delete-after build/ /var/lib/arvados/workbench2/
`, stdout, stderr); err != nil {
return 1
projects / arvados.git / blobdiff