while read line ; do
if [[ $line =~ "ok: down: ready:" ]] ; then
kill $LOGPID
- set +e
- wait $LOGPID 2>/dev/null
- set -e
- else
- echo $line
+ set +e
+ wait $LOGPID 2>/dev/null
+ set -e
+ else
+ echo $line
fi
done < $FF
rm $FF
docker_run_dev() {
docker run \
- "--volume=$ARVADOS_ROOT:/usr/src/arvados:rw" \
+ "--volume=$ARVADOS_ROOT:/usr/src/arvados:rw" \
"--volume=$COMPOSER_ROOT:/usr/src/composer:rw" \
"--volume=$WORKBENCH2_ROOT:/usr/src/workbench2:rw" \
"--volume=$PG_DATA:/var/lib/postgresql:rw" \
"--volume=$NPMCACHE:/var/lib/npm:rw" \
"--volume=$GOSTUFF:/var/lib/gopath:rw" \
"--volume=$RLIBS:/var/lib/Rlibs:rw" \
- --label "org.arvados.arvbox_config=$CONFIG" \
- "$@"
+ --label "org.arvados.arvbox_config=$CONFIG" \
+ "$@"
}
running_config() {
need_setup=1
if docker ps -a --filter "status=running" | grep -E "$ARVBOX_CONTAINER$" -q ; then
- if [[ $(running_config) != "$CONFIG" ]] ; then
- echo "Container $ARVBOX_CONTAINER is '$(running_config)' config but requested '$CONFIG'; use restart or reboot"
- return 1
- fi
+ if [[ $(running_config) != "$CONFIG" ]] ; then
+ echo "Container $ARVBOX_CONTAINER is '$(running_config)' config but requested '$CONFIG'; use restart or reboot"
+ return 1
+ fi
if test "$CONFIG" = test -o "$CONFIG" = devenv ; then
need_setup=0
else
if test -n "$TAG"
then
if test $(echo $TAG | cut -c1-1) != '-' ; then
- TAG=":$TAG"
+ TAG=":$TAG"
shift
else
- if [[ $TAG = '-' ]] ; then
- shift
- fi
+ if [[ $TAG = '-' ]] ; then
+ shift
+ fi
unset TAG
fi
fi
defaultdev=$(/sbin/ip route|awk '/default/ { print $5 }')
localip=$(ip addr show $defaultdev | grep 'inet ' | sed 's/ *inet \(.*\)\/.*/\1/')
fi
- echo "Public arvbox will use address $localip"
+ echo "Public arvbox will use address $localip"
iptemp=$(mktemp)
echo $localip > $iptemp
chmod og+r $iptemp
--publish=8001:8001
--publish=8002:8002
--publish=4202:4202
- --publish=45000-45020:45000-45020"
+ --publish=45000-45020:45000-45020"
else
PUBLIC=""
fi
--name=$ARVBOX_CONTAINER \
--privileged \
--volumes-from $ARVBOX_CONTAINER-data \
- --label "org.arvados.arvbox_config=$CONFIG" \
+ --label "org.arvados.arvbox_config=$CONFIG" \
$PUBLIC \
arvados/arvbox-demo$TAG
updateconf
--detach \
--name=$ARVBOX_CONTAINER \
--privileged \
- "--env=SVDIR=/etc/test-service" \
+ "--env=SVDIR=/etc/test-service" \
arvados/arvbox-dev$TAG
docker exec -ti \
/var/lib/arvbox/service/api/run-service --only-setup
fi
- interactive=""
- if [[ -z "$@" ]] ; then
- interactive=--interactive
- fi
+ interactive=""
+ if [[ -z "$@" ]] ; then
+ interactive=--interactive
+ fi
docker exec -ti \
-e LINES=$(tput lines) \
-e TERM=$TERM \
-e WORKSPACE=/usr/src/arvados \
-e GEM_HOME=/var/lib/gems \
- -e CONFIGSRC=/var/lib/arvados/run_tests \
+ -e CONFIGSRC=/var/lib/arvados/run_tests \
$ARVBOX_CONTAINER \
/usr/local/lib/arvbox/runsu.sh \
/usr/src/arvados/build/run-tests.sh \
--temp /var/lib/arvados/test \
- $interactive \
+ $interactive \
"$@"
elif [[ "$CONFIG" = devenv ]] ; then
- if [[ $need_setup = 1 ]] ; then
- docker_run_dev \
+ if [[ $need_setup = 1 ]] ; then
+ docker_run_dev \
--detach \
- --name=${ARVBOX_CONTAINER} \
- "--env=SVDIR=/etc/devenv-service" \
- "--volume=$HOME:$HOME:rw" \
- --volume=/tmp/.X11-unix:/tmp/.X11-unix:rw \
- arvados/arvbox-dev$TAG
- fi
- exec docker exec --interactive --tty \
- -e LINES=$(tput lines) \
- -e COLUMNS=$(tput cols) \
- -e TERM=$TERM \
- -e "ARVBOX_HOME=$HOME" \
- -e "DISPLAY=$DISPLAY" \
- --workdir=$PWD \
- ${ARVBOX_CONTAINER} \
- /usr/local/lib/arvbox/devenv.sh "$@"
+ --name=${ARVBOX_CONTAINER} \
+ "--env=SVDIR=/etc/devenv-service" \
+ "--volume=$HOME:$HOME:rw" \
+ --volume=/tmp/.X11-unix:/tmp/.X11-unix:rw \
+ arvados/arvbox-dev$TAG
+ fi
+ exec docker exec --interactive --tty \
+ -e LINES=$(tput lines) \
+ -e COLUMNS=$(tput cols) \
+ -e TERM=$TERM \
+ -e "ARVBOX_HOME=$HOME" \
+ -e "DISPLAY=$DISPLAY" \
+ --workdir=$PWD \
+ ${ARVBOX_CONTAINER} \
+ /usr/local/lib/arvbox/devenv.sh "$@"
elif [[ "$CONFIG" =~ dev$ ]] ; then
docker_run_dev \
--detach \
updateconf
wait_for_arvbox
echo "The Arvados source code is checked out at: $ARVADOS_ROOT"
- echo "The Arvados testing root certificate is $VAR_DATA/root-cert.pem"
- if [[ "$(listusers)" =~ ^\{\} ]] ; then
- echo "No users defined, use 'arvbox adduser' to add user logins"
- else
- echo "Use 'arvbox listusers' to see user logins"
- fi
+ echo "The Arvados testing root certificate is $VAR_DATA/root-cert.pem"
+ if [[ "$(listusers)" =~ ^\{\} ]] ; then
+ echo "No users defined, use 'arvbox adduser' to add user logins"
+ else
+ echo "Use 'arvbox listusers' to see user logins"
+ fi
else
echo "Unknown configuration '$CONFIG'"
fi
if test -n "$TAG"
then
if test $(echo $TAG | cut -c1-1) != '-' ; then
- TAG=":$TAG"
+ TAG=":$TAG"
shift
else
unset TAG
fi
if echo "$CONFIG" | grep 'demo$' ; then
- docker pull arvados/arvbox-demo$TAG
+ docker pull arvados/arvbox-demo$TAG
else
- docker pull arvados/arvbox-dev$TAG
+ docker pull arvados/arvbox-dev$TAG
fi
}
sh*)
exec docker exec --interactive --tty \
- -e LINES=$(tput lines) \
- -e COLUMNS=$(tput cols) \
- -e TERM=$TERM \
- -e GEM_HOME=/var/lib/gems \
- $ARVBOX_CONTAINER /bin/bash
+ -e LINES=$(tput lines) \
+ -e COLUMNS=$(tput cols) \
+ -e TERM=$TERM \
+ -e GEM_HOME=/var/lib/gems \
+ $ARVBOX_CONTAINER /bin/bash
;;
ash*)
exec docker exec --interactive --tty \
- -e LINES=$(tput lines) \
- -e COLUMNS=$(tput cols) \
- -e TERM=$TERM \
- -e GEM_HOME=/var/lib/gems \
- -u arvbox \
- -w /usr/src/arvados \
- $ARVBOX_CONTAINER /bin/bash --login
+ -e LINES=$(tput lines) \
+ -e COLUMNS=$(tput cols) \
+ -e TERM=$TERM \
+ -e GEM_HOME=/var/lib/gems \
+ -u arvbox \
+ -w /usr/src/arvados \
+ $ARVBOX_CONTAINER /bin/bash --login
;;
pipe)
update)
check $@
stop
- update $@
+ update $@
run $@
;;
status)
echo "Container: $ARVBOX_CONTAINER"
if docker ps -a --filter "status=running" | grep -E "$ARVBOX_CONTAINER$" -q ; then
- echo "Cluster id: $(getclusterid)"
+ echo "Cluster id: $(getclusterid)"
echo "Status: running"
echo "Container IP: $(getip)"
echo "Published host: $(gethost)"
clone)
if test -n "$2" ; then
- mkdir -p "$ARVBOX_BASE/$2"
+ mkdir -p "$ARVBOX_BASE/$2"
cp -a "$ARVBOX_BASE/$1/passenger" \
- "$ARVBOX_BASE/$1/gems" \
- "$ARVBOX_BASE/$1/pip" \
- "$ARVBOX_BASE/$1/npm" \
- "$ARVBOX_BASE/$1/gopath" \
- "$ARVBOX_BASE/$1/Rlibs" \
- "$ARVBOX_BASE/$1/arvados" \
- "$ARVBOX_BASE/$1/composer" \
- "$ARVBOX_BASE/$1/workbench2" \
- "$ARVBOX_BASE/$2"
+ "$ARVBOX_BASE/$1/gems" \
+ "$ARVBOX_BASE/$1/pip" \
+ "$ARVBOX_BASE/$1/npm" \
+ "$ARVBOX_BASE/$1/gopath" \
+ "$ARVBOX_BASE/$1/Rlibs" \
+ "$ARVBOX_BASE/$1/arvados" \
+ "$ARVBOX_BASE/$1/composer" \
+ "$ARVBOX_BASE/$1/workbench2" \
+ "$ARVBOX_BASE/$2"
echo "Created new arvbox $2"
echo "export ARVBOX_CONTAINER=$2"
else
;;
root-cert)
- CERT=$PWD/${ARVBOX_CONTAINER}-root-cert.crt
- if test -n "$1" ; then
- CERT="$1"
- fi
- docker exec $ARVBOX_CONTAINER cat /var/lib/arvados/root-cert.pem > "$CERT"
- echo "Certificate copied to $CERT"
- ;;
+ CERT=$PWD/${ARVBOX_CONTAINER}-root-cert.crt
+ if test -n "$1" ; then
+ CERT="$1"
+ fi
+ docker exec $ARVBOX_CONTAINER cat /var/lib/arvados/root-cert.pem > "$CERT"
+ echo "Certificate copied to $CERT"
+ ;;
psql)
- exec docker exec -ti $ARVBOX_CONTAINER bash -c 'PGPASSWORD=$(cat /var/lib/arvados/api_database_pw) exec psql --dbname=arvados_development --host=localhost --username=arvados'
- ;;
+ exec docker exec -ti $ARVBOX_CONTAINER bash -c 'PGPASSWORD=$(cat /var/lib/arvados/api_database_pw) exec psql --dbname=arvados_development --host=localhost --username=arvados'
+ ;;
checkpoint)
- exec docker exec -ti $ARVBOX_CONTAINER bash -c 'PGPASSWORD=$(cat /var/lib/arvados/api_database_pw) exec pg_dump --host=localhost --username=arvados --clean arvados_development > /var/lib/arvados/checkpoint.sql'
- ;;
+ exec docker exec -ti $ARVBOX_CONTAINER bash -c 'PGPASSWORD=$(cat /var/lib/arvados/api_database_pw) exec pg_dump --host=localhost --username=arvados --clean arvados_development > /var/lib/arvados/checkpoint.sql'
+ ;;
restore)
- exec docker exec -ti $ARVBOX_CONTAINER bash -c 'PGPASSWORD=$(cat /var/lib/arvados/api_database_pw) exec psql --dbname=arvados_development --host=localhost --username=arvados --quiet --file=/var/lib/arvados/checkpoint.sql'
- ;;
+ exec docker exec -ti $ARVBOX_CONTAINER bash -c 'PGPASSWORD=$(cat /var/lib/arvados/api_database_pw) exec psql --dbname=arvados_development --host=localhost --username=arvados --quiet --file=/var/lib/arvados/checkpoint.sql'
+ ;;
hotreset)
- exec docker exec -i $ARVBOX_CONTAINER /usr/bin/env GEM_HOME=/var/lib/gems /bin/bash - <<EOF
+ exec docker exec -i $ARVBOX_CONTAINER /usr/bin/env GEM_HOME=/var/lib/gems /bin/bash - <<EOF
sv stop api
sv stop controller
sv stop websockets
sv restart keepstore1
sv restart keepproxy
EOF
- ;;
+ ;;
adduser)
- docker exec -ti $ARVBOX_CONTAINER /usr/local/lib/arvbox/edit_users.py /var/lib/arvados/cluster_config.yml.override $(getclusterid) add $@
- docker exec $ARVBOX_CONTAINER sv restart controller
- ;;
+ docker exec -ti $ARVBOX_CONTAINER /usr/local/lib/arvbox/edit_users.py /var/lib/arvados/cluster_config.yml.override $(getclusterid) add $@
+ docker exec $ARVBOX_CONTAINER sv restart controller
+ ;;
removeuser)
- docker exec -ti $ARVBOX_CONTAINER /usr/local/lib/arvbox/edit_users.py /var/lib/arvados/cluster_config.yml.override $(getclusterid) remove $@
- docker exec $ARVBOX_CONTAINER sv restart controller
- ;;
+ docker exec -ti $ARVBOX_CONTAINER /usr/local/lib/arvbox/edit_users.py /var/lib/arvados/cluster_config.yml.override $(getclusterid) remove $@
+ docker exec $ARVBOX_CONTAINER sv restart controller
+ ;;
listusers)
- listusers
- ;;
+ listusers
+ ;;
*)
echo "Arvados-in-a-box https://doc.arvados.org/install/arvbox.html"
echo "build <config> build arvbox Docker image"
echo "reboot <config> stop, build arvbox Docker image, run"
echo "rebuild <config> build arvbox Docker image, no layer cache"
- echo "checkpoint create database backup"
- echo "restore restore checkpoint"
- echo "hotreset reset database and restart API without restarting container"
+ echo "checkpoint create database backup"
+ echo "restore restore checkpoint"
+ echo "hotreset reset database and restart API without restarting container"
echo "reset delete arvbox arvados data (be careful!)"
echo "destroy delete all arvbox code and data (be careful!)"
echo "log <service> tail log of specified service"
echo "cat <files> get contents of files inside arvbox"
echo "pipe run a bash script piped in from stdin"
echo "sv <start|stop|restart> <service> "
- echo " change state of service inside arvbox"
+ echo " change state of service inside arvbox"
echo "clone <from> <to> clone dev arvbox"
- echo "adduser <username> <email>"
- echo " add a user login"
- echo "removeuser <username>"
- echo " remove user login"
- echo "listusers list user logins"
+ echo "adduser <username> <email>"
+ echo " add a user login"
+ echo "removeuser <username>"
+ echo " remove user login"
+ echo "listusers list user logins"
;;
esac
projects / arvados.git / blobdiff