- Running workflows at the command line:
- user/cwl/cwl-runner.html.textile.liquid
- user/cwl/cwl-run-options.html.textile.liquid
- # - user/topics/running-pipeline-command-line.html.textile.liquid
- # - user/topics/arv-run.html.textile.liquid
- Working with git repositories:
- user/tutorials/add-new-repository.html.textile.liquid
- user/tutorials/git-arvados-guide.html.textile.liquid
- user/cwl/cwl-style.html.textile.liquid
- user/cwl/cwl-extensions.html.textile.liquid
- user/topics/arv-docker.html.textile.liquid
- # - user/tutorials/running-external-program.html.textile.liquid
- # - user/topics/crunch-tools-overview.html.textile.liquid
- # - user/tutorials/tutorial-firstscript.html.textile.liquid
- # - user/tutorials/tutorial-submit-job.html.textile.liquid
- # - user/topics/tutorial-parallel.html.textile.liquid
- Reference:
- user/reference/cookbook.html.textile.liquid
- # - user/topics/run-command.html.textile.liquid
- # - user/reference/job-pipeline-ref.html.textile.liquid
- # - user/examples/crunch-examples.html.textile.liquid
- #- Query the metadata database:
- # - user/topics/tutorial-trait-search.html.textile.liquid
- Arvados License:
- user/copying/copying.html.textile.liquid
- user/copying/agpl-3.0.html
- user/copying/LICENSE-2.0.html
- user/copying/by-sa-3.0.html
+ - Obsolete documentation:
+ - user/topics/running-pipeline-command-line.html.textile.liquid
+ - user/topics/arv-run.html.textile.liquid
+ - user/tutorials/running-external-program.html.textile.liquid
+ - user/topics/crunch-tools-overview.html.textile.liquid
+ - user/tutorials/tutorial-firstscript.html.textile.liquid
+ - user/tutorials/tutorial-submit-job.html.textile.liquid
+ - user/topics/tutorial-parallel.html.textile.liquid
+ - user/topics/run-command.html.textile.liquid
+ - user/reference/job-pipeline-ref.html.textile.liquid
+ - user/examples/crunch-examples.html.textile.liquid
+ - user/topics/tutorial-trait-search.html.textile.liquid
sdk:
- Overview:
- sdk/index.html.textile.liquid
- sdk/python/sdk-python.html.textile.liquid
- sdk/python/example.html.textile.liquid
- sdk/python/python.html.textile.liquid
- # - sdk/python/crunch-utility-libraries.html.textile.liquid
- sdk/python/arvados-fuse.html.textile.liquid
- sdk/python/events.html.textile.liquid
- sdk/python/cookbook.html.textile.liquid
+ - sdk/python/crunch-utility-libraries.html.textile.liquid
- CLI:
- sdk/cli/install.html.textile.liquid
- sdk/cli/index.html.textile.liquid