+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: CC-BY-SA-3.0
+
# baseurl is the location of the generated site from the browser's
# perspective (e.g., http://doc.arvados.org or
# file:///tmp/arvados/doc/.site). To make docs show up inside
- Welcome:
- user/index.html.textile.liquid
- user/getting_started/community.html.textile.liquid
- - Run a pipeline using Workbench:
+ - Run a workflow using Workbench:
- user/getting_started/workbench.html.textile.liquid
- - user/tutorials/tutorial-pipeline-workbench.html.textile.liquid
+ - user/tutorials/tutorial-workflow-workbench.html.textile.liquid
- Access an Arvados virtual machine:
- user/getting_started/vm-login-with-webshell.html.textile.liquid
- user/getting_started/ssh-access-unix.html.textile.liquid
- Working with data sets:
- user/tutorials/tutorial-keep.html.textile.liquid
- user/tutorials/tutorial-keep-get.html.textile.liquid
+ - user/tutorials/tutorial-keep-collection-lifecycle.html.textile.liquid
- user/tutorials/tutorial-keep-mount.html.textile.liquid
- user/topics/keep.html.textile.liquid
- user/topics/arv-copy.html.textile.liquid
- - Using Common Workflow Language:
+ - Running workflows at the command line:
- user/cwl/cwl-runner.html.textile.liquid
- - user/cwl/cwl-style.html.textile.liquid
- - Working on the command line:
+ - user/cwl/cwl-run-options.html.textile.liquid
- user/topics/running-pipeline-command-line.html.textile.liquid
- user/topics/arv-run.html.textile.liquid
- Working with git repositories:
- user/tutorials/add-new-repository.html.textile.liquid
- user/tutorials/git-arvados-guide.html.textile.liquid
- - Develop an Arvados pipeline:
+ - Develop an Arvados workflow:
- user/tutorials/intro-crunch.html.textile.liquid
+ - user/tutorials/writing-cwl-workflow.html.textile.liquid
+ - user/cwl/cwl-style.html.textile.liquid
+ - user/cwl/cwl-extensions.html.textile.liquid
+ - user/topics/arv-docker.html.textile.liquid
- user/tutorials/running-external-program.html.textile.liquid
- user/topics/crunch-tools-overview.html.textile.liquid
- user/tutorials/tutorial-firstscript.html.textile.liquid
- user/tutorials/tutorial-submit-job.html.textile.liquid
- user/topics/tutorial-parallel.html.textile.liquid
- - user/topics/arv-docker.html.textile.liquid
- Develop a web service:
- user/topics/arv-web.html.textile.liquid
- Reference:
+ - user/reference/cookbook.html.textile.liquid
- user/topics/run-command.html.textile.liquid
- user/reference/job-pipeline-ref.html.textile.liquid
- user/examples/crunch-examples.html.textile.liquid
+ - Admin tools:
+ - user/topics/arvados-sync-groups.html.textile.liquid
+ - admin/change-account-owner.html.textile.liquid
+ - admin/merge-remote-account.html.textile.liquid
- Query the metadata database:
- user/topics/tutorial-trait-search.html.textile.liquid
- Arvados License:
- sdk/python/python.html.textile.liquid
- sdk/python/crunch-utility-libraries.html.textile.liquid
- sdk/python/events.html.textile.liquid
+ - sdk/python/cookbook.html.textile.liquid
- CLI:
- sdk/cli/install.html.textile.liquid
- sdk/cli/index.html.textile.liquid
- Go:
- sdk/go/index.html.textile.liquid
- sdk/go/example.html.textile.liquid
+ - R:
+ - sdk/R/R.html.textile.liquid
- Perl:
- sdk/perl/index.html.textile.liquid
- sdk/perl/example.html.textile.liquid
- api/methods.html.textile.liquid
- api/resources.html.textile.liquid
- api/permission-model.html.textile.liquid
+ - api/storage.html.textile.liquid
- api/execution.html.textile.liquid
- Permission and authentication:
- - api/methods/users.html.textile.liquid
- - api/methods/groups.html.textile.liquid
- api/methods/api_client_authorizations.html.textile.liquid
- api/methods/api_clients.html.textile.liquid
- api/methods/authorized_keys.html.textile.liquid
+ - api/methods/groups.html.textile.liquid
+ - api/methods/users.html.textile.liquid
- System resources:
- api/methods/keep_services.html.textile.liquid
- api/methods/links.html.textile.liquid
- install/install-postgresql.html.textile.liquid
- install/install-sso.html.textile.liquid
- install/install-api-server.html.textile.liquid
+ - install/install-ws.html.textile.liquid
- install/install-arv-git-httpd.html.textile.liquid
- install/install-workbench-app.html.textile.liquid
- install/install-shell-server.html.textile.liquid
- install/configure-azure-blob-storage.html.textile.liquid
- install/install-keepproxy.html.textile.liquid
- install/install-keep-web.html.textile.liquid
+ - install/install-keep-balance.html.textile.liquid
- Containers API support on SLURM:
- install/crunch2-slurm/install-prerequisites.html.textile.liquid
+ - install/crunch2-slurm/install-slurm.html.textile.liquid
- install/crunch2-slurm/install-compute-node.html.textile.liquid
- install/crunch2-slurm/install-dispatch.html.textile.liquid
- install/crunch2-slurm/install-test.html.textile.liquid
+ - install/install-nodemanager.html.textile.liquid
+ - install/install-compute-ping.html.textile.liquid
- Jobs API support (deprecated):
- install/install-crunch-dispatch.html.textile.liquid
- install/install-compute-node.html.textile.liquid
- Helpful hints:
- install/copy_pipeline_from_curoverse.html.textile.liquid
- install/cheat_sheet.html.textile.liquid
+ - Migrating from Docker 1.9:
+ - install/migrate-docker19.html.textile.liquid
projects / arvados.git / blobdiff