# Arvados cli client
#
-# Ward Vandewege <ward@clinicalfuture.com>
+# Ward Vandewege <ward@curoverse.com>
require 'fileutils'
class Google::APIClient
def discovery_document(api, version)
api = api.to_s
- return @discovery_documents["#{api}:#{version}"] ||=
+ discovery_uri = self.discovery_uri(api, version)
+ discovery_uri_hash = Digest::MD5.hexdigest(discovery_uri)
+ return @discovery_documents[discovery_uri_hash] ||=
begin
# fetch new API discovery doc if stale
- cached_doc = File.expand_path '~/.cache/arvados/discovery_uri.json'
- if not File.exist?(cached_doc) or (Time.now - File.mtime(cached_doc)) > 86400
+ cached_doc = File.expand_path "~/.cache/arvados/discovery-#{discovery_uri_hash}.json" rescue nil
+
+ if cached_doc.nil? or not File.exist?(cached_doc) or (Time.now - File.mtime(cached_doc)) > 86400
response = self.execute!(:http_method => :get,
- :uri => self.discovery_uri(api, version),
+ :uri => discovery_uri,
:authenticated => false)
- FileUtils.makedirs(File.dirname cached_doc)
- File.open(cached_doc, 'w') do |f|
- f.puts response.body
+
+ begin
+ FileUtils.makedirs(File.dirname cached_doc)
+ File.open(cached_doc, 'w') do |f|
+ f.puts response.body
+ end
+ rescue
+ return JSON.load response.body
end
end
def init_config
# read authentication data from arvados configuration file if present
lineno = 0
- config_file = File.expand_path('~/.config/arvados/settings.conf')
- if File.exist? config_file then
+ config_file = File.expand_path('~/.config/arvados/settings.conf') rescue nil
+ if not config_file.nil? and File.exist? config_file then
File.open(config_file, 'r').each do |line|
lineno = lineno + 1
# skip comments
case subcommand
when 'keep'
@sub = remaining_opts.shift
- if ['get', 'put', 'ls', 'normalize'].index @sub then
+ if ['get', 'put', 'ls', 'normalize', 'copy'].index @sub then
# Native Arvados
exec `which arv-#{@sub}`.strip, *remaining_opts
elsif ['less', 'check'].index @sub then
def help_resources(option_parser, discovery_document, resource)
option_parser.educate
-
- if not resource.nil? and resource != '--help' then
- Trollop::die "Unknown resource type #{resource.inspect}"
- end
exit 255
end