def arg_parser(): # type: () -> argparse.ArgumentParser
- parser = argparse.ArgumentParser(description='Arvados executor for Common Workflow Language')
+ parser = argparse.ArgumentParser(
+ description='Arvados executor for Common Workflow Language',
+ parents=[arv_cmd.retry_opt],
+ )
parser.add_argument("--basedir",
help="Base directory used to resolve relative references in the input, default to directory of input object file or current directory (if inputs piped/provided on command line).")
try:
if api_client is None:
api_client = arvados.safeapi.ThreadSafeApiCache(
- api_params={"model": OrderedJsonModel(), "timeout": arvargs.http_timeout},
- keep_params={"num_retries": 4},
+ api_params={
+ 'model': OrderedJsonModel(),
+ 'num_retries': arvargs.retries,
+ 'timeout': arvargs.http_timeout,
+ },
+ keep_params={
+ 'num_retries': arvargs.retries,
+ },
version='v1',
)
keep_client = api_client.keep
api_client.users().current().execute()
if keep_client is None:
block_cache = arvados.keep.KeepBlockCache(disk_cache=True)
- keep_client = arvados.keep.KeepClient(api_client=api_client, num_retries=4, block_cache=block_cache)
- executor = ArvCwlExecutor(api_client, arvargs, keep_client=keep_client, num_retries=4, stdout=stdout)
+ keep_client = arvados.keep.KeepClient(
+ api_client=api_client,
+ block_cache=block_cache,
+ num_retries=arvargs.retries,
+ )
+ executor = ArvCwlExecutor(
+ api_client,
+ arvargs,
+ keep_client=keep_client,
+ num_retries=arvargs.retries,
+ stdout=stdout,
+ )
except WorkflowException as e:
logger.error(e, exc_info=(sys.exc_info()[1] if arvargs.debug else False))
return 1