-# Go to "Collections":http://{{ site.arvados_workbench_host }}/collections .
-# On the collections page, go to the search box <span class="glyphicon glyphicon-search"></span> and search for "tutorial".
-# This should yield a collection with the contents "var-GS000016015-ASM.tsv.bz2"
-# Click on the check box to the left of "var-GS000016015-ASM.tsv.bz2". This puts the collection in your persistent selection list. Click on the paperclip <span class="glyphicon glyphicon-paperclip"></span> in the upper right to get a dropdown menu listing your current selections.
-# Go to "Pipeline templates":http://{{ site.arvados_workbench_host }}/pipeline_templates .
-# Look for a pipeline named "Tutorial pipeline".
-# Click on the play button <span class="glyphicon glyphicon-play"></span> to the left of "Tutorial pipeline". This will take you to a new page to configure the pipeline.
-# Under *parameter* look for "input". Set the value of "input" by clicking on on "none" to get a editing popup. At the top of the selection list in the editing popup will be the collection that you selected in step 4.
-# You can now click on "Run pipeline" in the upper right to start the pipeline.
-# This will reload the page with the pipeline queued to run.
-# The page refreshes automatically every 15 seconds. You should see the pipeline running, and then finish successfully.
-# Once it is finished, click on the link under the *output* column. This will take you to the collection page for the output of this pipeline.
-# Click on "md5sum.txt" to see the actual file that is the output of this pipeline.
-# On the collection page, click on the "Provenance graph" tab to see a graphical representation of the data elements and pipelines that were involved in generating this file.
+# Start from the *Workbench Dashboard*. You can access the Dashboard by clicking on *<i class="fa fa-lg fa-fw fa-dashboard"></i> Dashboard* in the upper left corner of any Workbench page.
+# Click on the <span class="btn btn-sm btn-primary"><i class="fa fa-fw fa-gear"></i> Run a pipeline...</span> button. This will open a dialog box titled *Choose a pipeline to run*.
+# Click to open the *All projects <span class="caret"></span>* menu. Under the *Projects shared with me* header, select *<i class="fa fa-fw fa-share-alt"></i> Arvados Tutorial*.
+# Select *<i class="fa fa-fw fa-gear"></i> Tutorial align using bwa mem* and click the <span class="btn btn-sm btn-primary" >Next: choose inputs <i class="fa fa-fw fa-arrow-circle-right"></i></span> button. This will load a new page where you will supply the inputs for the pipeline.
+# The first input parameter to the pipeline is *Reference genoma (fasta)*. Click the <span class="btn btn-sm btn-primary">Choose</span> button beneath that header. This will open a dialog box titled *Choose a dataset for Reference genome (fasta)*.
+# Once again, open the *All projects <span class="caret"></span>* menu and select *<i class="fa fa-fw fa-share-alt"></i> Arvados Tutorial*. Select *<i class="fa fa-fw fa-archive"></i> Tutorial chromosome 19 reference* and click the <span class="btn btn-sm btn-primary" >OK</span> button.
+# Repeat the previous two steps to set the *Input genome (fastq)* parameter to *<i class="fa fa-fw fa-archive"></i> Tutorial sample exome*.
+# Click on the <span class="btn btn-sm btn-primary" >Run <i class="fa fa-fw fa-play"></i></span> button. The page updates to show you that the pipeline has been submitted to run on the Arvados cluster.
+# After the pipeline starts running, you can track the progress by watching log messages from jobs. This page refreshes automatically. You will see a <span class="label label-success">success</span> label under the *job* the column when the pipeline completes successfully.
+# Click on the *Output* link to see the results of the job. This will load a new page listing the output files from this pipeline. You'll see the output SAM file from the alignment tool under the *Files* tab.
+# Click on the <span class="btn btn-sm btn-info"><i class="fa fa-download"></i></span> download button to the right of the SAM file to download your results.