CWLTOOL=path (optional) Path to cwltool git repository.
SALAD=path (optional) Path to schema_salad git repository.
CWL_UTILS=path (optional) Path to cwl-utils git repository.
-PYCMD=pythonexec (optional) Specify the python3 executable to use in the docker image. Defaults to "python3".
EOF
echo "Using WORKSPACE $WORKSPACE"
fi
-if [[ -z "$ARVADOS_API_HOST" || -z "$ARVADOS_API_TOKEN" ]] ; then
- echo "$helpmessage"
- echo
- echo "Must set ARVADOS_API_HOST and ARVADOS_API_TOKEN"
- exit 1
-fi
-
-cd "$WORKSPACE"
-
-py=python3
-pipcmd=pip
-if [[ -n "$PYCMD" ]] ; then
- py="$PYCMD"
-fi
-if [[ $py = python3 ]] ; then
- pipcmd=pip3
-fi
+context_dir="$(mktemp --directory --tmpdir dev-jobs.XXXXXXXX)"
+trap 'rm -rf "$context_dir"' EXIT INT TERM QUIT
-(cd sdk/python && python3 setup.py sdist)
-sdk=$(cd sdk/python/dist && ls -t arvados-python-client-*.tar.gz | head -n1)
-
-(cd sdk/cwl && python3 setup.py sdist)
-runner=$(cd sdk/cwl/dist && ls -t arvados-cwl-runner-*.tar.gz | head -n1)
-
-rm -rf sdk/cwl/salad_dist
-mkdir -p sdk/cwl/salad_dist
-if [[ -n "$SALAD" ]] ; then
- (cd "$SALAD" && python3 setup.py sdist)
- salad=$(cd "$SALAD/dist" && ls -t schema-salad-*.tar.gz | head -n1)
- cp "$SALAD/dist/$salad" $WORKSPACE/sdk/cwl/salad_dist
-fi
-
-rm -rf sdk/cwl/cwltool_dist
-mkdir -p sdk/cwl/cwltool_dist
-if [[ -n "$CWLTOOL" ]] ; then
- (cd "$CWLTOOL" && python3 setup.py sdist)
- cwltool=$(cd "$CWLTOOL/dist" && ls -t cwltool-*.tar.gz | head -n1)
- cp "$CWLTOOL/dist/$cwltool" $WORKSPACE/sdk/cwl/cwltool_dist
-fi
-
-rm -rf sdk/cwl/cwlutils_dist
-mkdir -p sdk/cwl/cwlutils_dist
-if [[ -n "$CWL_UTILS" ]] ; then
- (cd "$CWL_UTILS" && python3 setup.py sdist)
- cwlutils=$(cd "$CWL_UTILS/dist" && ls -t cwl-utils-*.tar.gz | head -n1)
- cp "$CWL_UTILS/dist/$cwlutils" $WORKSPACE/sdk/cwl/cwlutils_dist
-fi
+for src_dir in "$WORKSPACE/sdk/python" "${CWLTOOL:-}" "${CWL_UTILS:-}" "${SALAD:-}" "$WORKSPACE/tools/crunchstat-summary" "$WORKSPACE/sdk/cwl"; do
+ if [[ -z "$src_dir" ]]; then
+ continue
+ fi
+ env -C "$src_dir" python3 setup.py sdist --dist-dir="$context_dir"
+done
+cd "$WORKSPACE"
. build/run-library.sh
-
# This defines python_sdk_version and cwl_runner_version with python-style
# package suffixes (.dev/rc)
calculate_python_sdk_cwl_package_versions
set -x
docker build --no-cache \
- --build-arg sdk=$sdk \
- --build-arg runner=$runner \
- --build-arg salad=$salad \
- --build-arg cwltool=$cwltool \
- --build-arg pythoncmd=$py \
- --build-arg pipcmd=$pipcmd \
- --build-arg cwlutils=$cwlutils \
-f "$WORKSPACE/sdk/dev-jobs.dockerfile" \
-t arvados/jobs:$cwl_runner_version \
- "$WORKSPACE/sdk"
+ "$context_dir"
-echo arv-keepdocker arvados/jobs $cwl_runner_version
arv-keepdocker arvados/jobs $cwl_runner_version