CloudVMs:
Enable: true
Driver: loopback
- BootProbeCommand: id
+ BootProbeCommand: "rm -f /var/lock/crunch-run-broken"
ProbeInterval: 1s
PollInterval: 5s
SyncInterval: 10s
TimeoutIdle: 1s
TimeoutBooting: 2s
RuntimeEngine: singularity
+ CrunchRunArgumentsList: ["--broken-node-hook", "true"]
RemoteClusters:
z1111:
Host: ` + hostport["z1111"] + `
}
func (s *IntegrationSuite) TestRunTrivialContainer(c *check.C) {
- conn1 := s.super.Conn("z1111")
- rootctx1, _, _ := s.super.RootClients("z1111")
- _, ac1, kc1, _ := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ outcoll := s.runContainer(c, "z1111", map[string]interface{}{
+ "command": []string{"sh", "-c", "touch \"/out/hello world\" /out/ohai"},
+ "container_image": "busybox:uclibc",
+ "cwd": "/tmp",
+ "environment": map[string]string{},
+ "mounts": map[string]arvados.Mount{"/out": {Kind: "tmp", Capacity: 10000}},
+ "output_path": "/out",
+ "runtime_constraints": arvados.RuntimeConstraints{RAM: 100000000, VCPUs: 1},
+ "priority": 1,
+ "state": arvados.ContainerRequestStateCommitted,
+ }, 0)
+ c.Check(outcoll.ManifestText, check.Matches, `\. d41d8.* 0:0:hello\\040world 0:0:ohai\n`)
+ c.Check(outcoll.PortableDataHash, check.Equals, "8fa5dee9231a724d7cf377c5a2f4907c+65")
+}
+
+func (s *IntegrationSuite) runContainer(c *check.C, clusterID string, ctrSpec map[string]interface{}, expectExitCode int) arvados.Collection {
+ conn := s.super.Conn(clusterID)
+ rootctx, _, _ := s.super.RootClients(clusterID)
+ _, ac, kc, _ := s.super.UserClients(clusterID, rootctx, c, conn, s.oidcprovider.AuthEmail, true)
c.Log("[docker load]")
out, err := exec.Command("docker", "load", "--input", arvadostest.BusyboxDockerImage(c)).CombinedOutput()
- c.Logf("[docker load done] %s", out)
+ c.Logf("[docker load output] %s", out)
c.Check(err, check.IsNil)
c.Log("[arv-keepdocker]")
akd := exec.Command("arv-keepdocker", "--no-resume", "busybox:uclibc")
- akd.Env = append(os.Environ(), "ARVADOS_API_HOST="+ac1.APIHost, "ARVADOS_API_HOST_INSECURE=1", "ARVADOS_API_TOKEN="+ac1.AuthToken)
- c.Logf("[arv-keepdocker env] %q", akd.Env)
+ akd.Env = append(os.Environ(), "ARVADOS_API_HOST="+ac.APIHost, "ARVADOS_API_HOST_INSECURE=1", "ARVADOS_API_TOKEN="+ac.AuthToken)
out, err = akd.CombinedOutput()
- c.Logf("[arv-keepdocker done] %s", out)
+ c.Logf("[arv-keepdocker output]\n%s", out)
c.Check(err, check.IsNil)
var cr arvados.ContainerRequest
- err = ac1.RequestAndDecode(&cr, "POST", "/arvados/v1/container_requests", nil, map[string]interface{}{
- "container_request": map[string]interface{}{
- "command": []string{"touch", "/out/hello_world"},
- "container_image": "busybox:uclibc",
- "cwd": "/tmp",
- "environment": map[string]string{},
- "mounts": map[string]arvados.Mount{"/out": {Kind: "tmp", Capacity: 10000}},
- "output_path": "/out",
- "runtime_constraints": arvados.RuntimeConstraints{RAM: 100000000, VCPUs: 1},
- "priority": 1,
- "state": arvados.ContainerRequestStateCommitted,
- },
+ err = ac.RequestAndDecode(&cr, "POST", "/arvados/v1/container_requests", nil, map[string]interface{}{
+ "container_request": ctrSpec,
})
c.Assert(err, check.IsNil)
showlogs := func(collectionID string) {
var logcoll arvados.Collection
- err = ac1.RequestAndDecode(&logcoll, "GET", "/arvados/v1/collections/"+collectionID, nil, nil)
+ err = ac.RequestAndDecode(&logcoll, "GET", "/arvados/v1/collections/"+collectionID, nil, nil)
c.Assert(err, check.IsNil)
- cfs, err := logcoll.FileSystem(ac1, kc1)
+ cfs, err := logcoll.FileSystem(ac, kc)
c.Assert(err, check.IsNil)
fs.WalkDir(arvados.FS(cfs), "/", func(path string, d fs.DirEntry, err error) error {
if d.IsDir() || strings.HasPrefix(path, "/log for container") {
deadline := time.Now().Add(time.Minute)
wait:
for ; ; lastState = ctr.State {
- err = ac1.RequestAndDecode(&ctr, "GET", "/arvados/v1/containers/"+cr.ContainerUUID, nil, nil)
+ err = ac.RequestAndDecode(&ctr, "GET", "/arvados/v1/containers/"+cr.ContainerUUID, nil, nil)
c.Assert(err, check.IsNil)
switch ctr.State {
case lastState:
}
c.Check(ctr.ExitCode, check.Equals, 0)
- err = ac1.RequestAndDecode(&cr, "GET", "/arvados/v1/container_requests/"+cr.UUID, nil, nil)
+ err = ac.RequestAndDecode(&cr, "GET", "/arvados/v1/container_requests/"+cr.UUID, nil, nil)
c.Assert(err, check.IsNil)
showlogs(cr.LogUUID)
var outcoll arvados.Collection
- err = ac1.RequestAndDecode(&outcoll, "GET", "/arvados/v1/collections/"+cr.OutputUUID, nil, nil)
+ err = ac.RequestAndDecode(&outcoll, "GET", "/arvados/v1/collections/"+cr.OutputUUID, nil, nil)
c.Assert(err, check.IsNil)
- c.Check(outcoll.ManifestText, check.Matches, `\. d41d8.* 0:0:hello_world\n`)
- c.Check(outcoll.PortableDataHash, check.Equals, "dac08d558cfb6c9536f604ca89e3c002+53")
+ return outcoll
}