- user/getting_started/community.html.textile.liquid
- Walkthough:
- user/tutorials/wgs-tutorial.html.textile.liquid
- - Run a workflow using Workbench:
+ - Using Workbench:
- user/getting_started/workbench.html.textile.liquid
- user/tutorials/tutorial-workflow-workbench.html.textile.liquid
+ - user/topics/workbench-migration.html.textile.liquid
- Working at the Command Line:
- user/getting_started/setup-cli.html.textile.liquid
- user/reference/api-tokens.html.textile.liquid
- user/topics/storage-classes.html.textile.liquid
- Data Analysis with Workflows:
- user/cwl/arvados-vscode-training.html.md.liquid
+ - user/cwl/rnaseq-cwl-training.html.textile.liquid
- user/cwl/cwl-runner.html.textile.liquid
- user/cwl/cwl-run-options.html.textile.liquid
- user/tutorials/writing-cwl-workflow.html.textile.liquid
- sdk/java-v2/index.html.textile.liquid
- sdk/java-v2/example.html.textile.liquid
- sdk/java-v2/javadoc.html.textile.liquid
- - Java v1:
- - sdk/java/index.html.textile.liquid
- - sdk/java/example.html.textile.liquid
- Perl:
- sdk/perl/index.html.textile.liquid
- sdk/perl/example.html.textile.liquid
- Docker quick start:
- install/arvbox.html.textile.liquid
- Installation with Salt:
- - install/salt.html.textile.liquid
- - install/salt-vagrant.html.textile.liquid
- install/salt-single-host.html.textile.liquid
- install/salt-multi-host.html.textile.liquid
- Arvados on Kubernetes:
- Manual installation:
- install/install-manual-prerequisites.html.textile.liquid
- install/packages.html.textile.liquid
- - admin/upgrading.html.textile.liquid
- Configuration:
- install/config.html.textile.liquid
- - admin/config-migration.html.textile.liquid
- - admin/config.html.textile.liquid
- admin/config-urls.html.textile.liquid
+ - admin/config.html.textile.liquid
+ - Maintenance and upgrading:
+ - admin/upgrading.html.textile.liquid
+ - admin/maintenance-and-upgrading.html.textile.liquid
- Core:
- install/install-api-server.html.textile.liquid
- Keep: