Updated README and removed debug prints
[arvados.git] / sdk / R / R / Arvados.R
index a9b7dc0f826c7fbf384e89d8a4b2032f12d40408..66e2794c7ed688ad8a88e6356ecd1971b2172222 100644 (file)
@@ -6,24 +6,6 @@
 #' @name users.get
 NULL
 
-#' users.index is a method defined in Arvados class.
-#' 
-#' @usage arv$users.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return UserList object.
-#' @name users.index
-NULL
-
 #' users.create is a method defined in Arvados class.
 #' 
 #' @usage arv$users.create(user, ensure_unique_name = "false")
@@ -120,22 +102,6 @@ NULL
 #' @name users.list
 NULL
 
-#' users.show is a method defined in Arvados class.
-#' 
-#' @usage arv$users.show(uuid)
-#' @param uuid 
-#' @return User object.
-#' @name users.show
-NULL
-
-#' users.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$users.destroy(uuid)
-#' @param uuid 
-#' @return User object.
-#' @name users.destroy
-NULL
-
 #' api_client_authorizations.get is a method defined in Arvados class.
 #' 
 #' @usage arv$api_client_authorizations.get(uuid)
@@ -144,27 +110,9 @@ NULL
 #' @name api_client_authorizations.get
 NULL
 
-#' api_client_authorizations.index is a method defined in Arvados class.
-#' 
-#' @usage arv$api_client_authorizations.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return ApiClientAuthorizationList object.
-#' @name api_client_authorizations.index
-NULL
-
 #' api_client_authorizations.create is a method defined in Arvados class.
 #' 
-#' @usage arv$api_client_authorizations.create(api_client_authorization,
+#' @usage arv$api_client_authorizations.create(apiclientauthorization,
 #'     ensure_unique_name = "false")
 #' @param apiClientAuthorization ApiClientAuthorization object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -174,7 +122,7 @@ NULL
 
 #' api_client_authorizations.update is a method defined in Arvados class.
 #' 
-#' @usage arv$api_client_authorizations.update(api_client_authorization,
+#' @usage arv$api_client_authorizations.update(apiclientauthorization,
 #'     uuid)
 #' @param apiClientAuthorization ApiClientAuthorization object.
 #' @param uuid The UUID of the ApiClientAuthorization in question.
@@ -225,33 +173,84 @@ NULL
 #' @name api_client_authorizations.list
 NULL
 
-#' api_client_authorizations.show is a method defined in Arvados class.
+#' containers.get is a method defined in Arvados class.
+#' 
+#' @usage arv$containers.get(uuid)
+#' @param uuid The UUID of the Container in question.
+#' @return Container object.
+#' @name containers.get
+NULL
+
+#' containers.create is a method defined in Arvados class.
+#' 
+#' @usage arv$containers.create(container,
+#'     ensure_unique_name = "false")
+#' @param container Container object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Container object.
+#' @name containers.create
+NULL
+
+#' containers.update is a method defined in Arvados class.
+#' 
+#' @usage arv$containers.update(container,
+#'     uuid)
+#' @param container Container object.
+#' @param uuid The UUID of the Container in question.
+#' @return Container object.
+#' @name containers.update
+NULL
+
+#' containers.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$containers.delete(uuid)
+#' @param uuid The UUID of the Container in question.
+#' @return Container object.
+#' @name containers.delete
+NULL
+
+#' containers.auth is a method defined in Arvados class.
 #' 
-#' @usage arv$api_client_authorizations.show(uuid)
+#' @usage arv$containers.auth(uuid)
 #' @param uuid 
-#' @return ApiClientAuthorization object.
-#' @name api_client_authorizations.show
+#' @return Container object.
+#' @name containers.auth
 NULL
 
-#' api_client_authorizations.destroy is a method defined in Arvados class.
+#' containers.lock is a method defined in Arvados class.
 #' 
-#' @usage arv$api_client_authorizations.destroy(uuid)
+#' @usage arv$containers.lock(uuid)
 #' @param uuid 
-#' @return ApiClientAuthorization object.
-#' @name api_client_authorizations.destroy
+#' @return Container object.
+#' @name containers.lock
 NULL
 
-#' api_clients.get is a method defined in Arvados class.
+#' containers.unlock is a method defined in Arvados class.
 #' 
-#' @usage arv$api_clients.get(uuid)
-#' @param uuid The UUID of the ApiClient in question.
-#' @return ApiClient object.
-#' @name api_clients.get
+#' @usage arv$containers.unlock(uuid)
+#' @param uuid 
+#' @return Container object.
+#' @name containers.unlock
 NULL
 
-#' api_clients.index is a method defined in Arvados class.
+#' containers.secret_mounts is a method defined in Arvados class.
 #' 
-#' @usage arv$api_clients.index(filters = NULL,
+#' @usage arv$containers.secret_mounts(uuid)
+#' @param uuid 
+#' @return Container object.
+#' @name containers.secret_mounts
+NULL
+
+#' containers.current is a method defined in Arvados class.
+#' 
+#' @usage arv$containers.current(NULL)
+#' @return Container object.
+#' @name containers.current
+NULL
+
+#' containers.list is a method defined in Arvados class.
+#' 
+#' @usage arv$containers.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -263,13 +262,21 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return ApiClientList object.
-#' @name api_clients.index
+#' @return ContainerList object.
+#' @name containers.list
+NULL
+
+#' api_clients.get is a method defined in Arvados class.
+#' 
+#' @usage arv$api_clients.get(uuid)
+#' @param uuid The UUID of the ApiClient in question.
+#' @return ApiClient object.
+#' @name api_clients.get
 NULL
 
 #' api_clients.create is a method defined in Arvados class.
 #' 
-#' @usage arv$api_clients.create(api_client,
+#' @usage arv$api_clients.create(apiclient,
 #'     ensure_unique_name = "false")
 #' @param apiClient ApiClient object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -279,7 +286,7 @@ NULL
 
 #' api_clients.update is a method defined in Arvados class.
 #' 
-#' @usage arv$api_clients.update(api_client,
+#' @usage arv$api_clients.update(apiclient,
 #'     uuid)
 #' @param apiClient ApiClient object.
 #' @param uuid The UUID of the ApiClient in question.
@@ -313,33 +320,45 @@ NULL
 #' @name api_clients.list
 NULL
 
-#' api_clients.show is a method defined in Arvados class.
+#' authorized_keys.get is a method defined in Arvados class.
 #' 
-#' @usage arv$api_clients.show(uuid)
-#' @param uuid 
-#' @return ApiClient object.
-#' @name api_clients.show
+#' @usage arv$authorized_keys.get(uuid)
+#' @param uuid The UUID of the AuthorizedKey in question.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.get
 NULL
 
-#' api_clients.destroy is a method defined in Arvados class.
+#' authorized_keys.create is a method defined in Arvados class.
 #' 
-#' @usage arv$api_clients.destroy(uuid)
-#' @param uuid 
-#' @return ApiClient object.
-#' @name api_clients.destroy
+#' @usage arv$authorized_keys.create(authorizedkey,
+#'     ensure_unique_name = "false")
+#' @param authorizedKey AuthorizedKey object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.create
 NULL
 
-#' container_requests.get is a method defined in Arvados class.
+#' authorized_keys.update is a method defined in Arvados class.
 #' 
-#' @usage arv$container_requests.get(uuid)
-#' @param uuid The UUID of the ContainerRequest in question.
-#' @return ContainerRequest object.
-#' @name container_requests.get
+#' @usage arv$authorized_keys.update(authorizedkey,
+#'     uuid)
+#' @param authorizedKey AuthorizedKey object.
+#' @param uuid The UUID of the AuthorizedKey in question.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.update
+NULL
+
+#' authorized_keys.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$authorized_keys.delete(uuid)
+#' @param uuid The UUID of the AuthorizedKey in question.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.delete
 NULL
 
-#' container_requests.index is a method defined in Arvados class.
+#' authorized_keys.list is a method defined in Arvados class.
 #' 
-#' @usage arv$container_requests.index(filters = NULL,
+#' @usage arv$authorized_keys.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -351,13 +370,21 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return ContainerRequestList object.
-#' @name container_requests.index
+#' @return AuthorizedKeyList object.
+#' @name authorized_keys.list
+NULL
+
+#' container_requests.get is a method defined in Arvados class.
+#' 
+#' @usage arv$container_requests.get(uuid)
+#' @param uuid The UUID of the ContainerRequest in question.
+#' @return ContainerRequest object.
+#' @name container_requests.get
 NULL
 
 #' container_requests.create is a method defined in Arvados class.
 #' 
-#' @usage arv$container_requests.create(container_request,
+#' @usage arv$container_requests.create(containerrequest,
 #'     ensure_unique_name = "false")
 #' @param containerRequest ContainerRequest object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -367,7 +394,7 @@ NULL
 
 #' container_requests.update is a method defined in Arvados class.
 #' 
-#' @usage arv$container_requests.update(container_request,
+#' @usage arv$container_requests.update(containerrequest,
 #'     uuid)
 #' @param containerRequest ContainerRequest object.
 #' @param uuid The UUID of the ContainerRequest in question.
@@ -401,36 +428,80 @@ NULL
 #' @name container_requests.list
 NULL
 
-#' container_requests.show is a method defined in Arvados class.
+#' collections.get is a method defined in Arvados class.
+#' 
+#' @usage arv$collections.get(uuid)
+#' @param uuid The UUID of the Collection in question.
+#' @return Collection object.
+#' @name collections.get
+NULL
+
+#' collections.create is a method defined in Arvados class.
+#' 
+#' @usage arv$collections.create(collection,
+#'     ensure_unique_name = "false")
+#' @param collection Collection object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Collection object.
+#' @name collections.create
+NULL
+
+#' collections.update is a method defined in Arvados class.
+#' 
+#' @usage arv$collections.update(collection,
+#'     uuid)
+#' @param collection Collection object.
+#' @param uuid The UUID of the Collection in question.
+#' @return Collection object.
+#' @name collections.update
+NULL
+
+#' collections.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$collections.delete(uuid)
+#' @param uuid The UUID of the Collection in question.
+#' @return Collection object.
+#' @name collections.delete
+NULL
+
+#' collections.provenance is a method defined in Arvados class.
 #' 
-#' @usage arv$container_requests.show(uuid)
+#' @usage arv$collections.provenance(uuid)
 #' @param uuid 
-#' @return ContainerRequest object.
-#' @name container_requests.show
+#' @return Collection object.
+#' @name collections.provenance
 NULL
 
-#' container_requests.destroy is a method defined in Arvados class.
+#' collections.used_by is a method defined in Arvados class.
 #' 
-#' @usage arv$container_requests.destroy(uuid)
+#' @usage arv$collections.used_by(uuid)
 #' @param uuid 
-#' @return ContainerRequest object.
-#' @name container_requests.destroy
+#' @return Collection object.
+#' @name collections.used_by
 NULL
 
-#' authorized_keys.get is a method defined in Arvados class.
+#' collections.trash is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.get(uuid)
-#' @param uuid The UUID of the AuthorizedKey in question.
-#' @return AuthorizedKey object.
-#' @name authorized_keys.get
+#' @usage arv$collections.trash(uuid)
+#' @param uuid 
+#' @return Collection object.
+#' @name collections.trash
 NULL
 
-#' authorized_keys.index is a method defined in Arvados class.
+#' collections.untrash is a method defined in Arvados class.
+#' 
+#' @usage arv$collections.untrash(uuid)
+#' @param uuid 
+#' @return Collection object.
+#' @name collections.untrash
+NULL
+
+#' collections.list is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.index(filters = NULL,
+#' @usage arv$collections.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
+#'     count = "exact", include_trash = NULL)
 #' @param filters 
 #' @param where 
 #' @param order 
@@ -439,41 +510,48 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return AuthorizedKeyList object.
-#' @name authorized_keys.index
+#' @param include_trash Include collections whose is_trashed attribute is true.
+#' @return CollectionList object.
+#' @name collections.list
 NULL
 
-#' authorized_keys.create is a method defined in Arvados class.
+#' humans.get is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.create(authorized_key,
-#'     ensure_unique_name = "false")
-#' @param authorizedKey AuthorizedKey object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return AuthorizedKey object.
-#' @name authorized_keys.create
+#' @usage arv$humans.get(uuid)
+#' @param uuid The UUID of the Human in question.
+#' @return Human object.
+#' @name humans.get
 NULL
 
-#' authorized_keys.update is a method defined in Arvados class.
+#' humans.create is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.update(authorized_key,
-#'     uuid)
-#' @param authorizedKey AuthorizedKey object.
-#' @param uuid The UUID of the AuthorizedKey in question.
-#' @return AuthorizedKey object.
-#' @name authorized_keys.update
+#' @usage arv$humans.create(human, ensure_unique_name = "false")
+#' @param human Human object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Human object.
+#' @name humans.create
 NULL
 
-#' authorized_keys.delete is a method defined in Arvados class.
+#' humans.update is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.delete(uuid)
-#' @param uuid The UUID of the AuthorizedKey in question.
-#' @return AuthorizedKey object.
-#' @name authorized_keys.delete
+#' @usage arv$humans.update(human, uuid)
+#' @param human Human object.
+#' @param uuid The UUID of the Human in question.
+#' @return Human object.
+#' @name humans.update
 NULL
 
-#' authorized_keys.list is a method defined in Arvados class.
+#' humans.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.list(filters = NULL,
+#' @usage arv$humans.delete(uuid)
+#' @param uuid The UUID of the Human in question.
+#' @return Human object.
+#' @name humans.delete
+NULL
+
+#' humans.list is a method defined in Arvados class.
+#' 
+#' @usage arv$humans.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -485,40 +563,50 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return AuthorizedKeyList object.
-#' @name authorized_keys.list
+#' @return HumanList object.
+#' @name humans.list
 NULL
 
-#' authorized_keys.show is a method defined in Arvados class.
+#' job_tasks.get is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.show(uuid)
-#' @param uuid 
-#' @return AuthorizedKey object.
-#' @name authorized_keys.show
+#' @usage arv$job_tasks.get(uuid)
+#' @param uuid The UUID of the JobTask in question.
+#' @return JobTask object.
+#' @name job_tasks.get
 NULL
 
-#' authorized_keys.destroy is a method defined in Arvados class.
+#' job_tasks.create is a method defined in Arvados class.
 #' 
-#' @usage arv$authorized_keys.destroy(uuid)
-#' @param uuid 
-#' @return AuthorizedKey object.
-#' @name authorized_keys.destroy
+#' @usage arv$job_tasks.create(jobtask, ensure_unique_name = "false")
+#' @param jobTask JobTask object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return JobTask object.
+#' @name job_tasks.create
 NULL
 
-#' collections.get is a method defined in Arvados class.
+#' job_tasks.update is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.get(uuid)
-#' @param uuid The UUID of the Collection in question.
-#' @return Collection object.
-#' @name collections.get
+#' @usage arv$job_tasks.update(jobtask, uuid)
+#' @param jobTask JobTask object.
+#' @param uuid The UUID of the JobTask in question.
+#' @return JobTask object.
+#' @name job_tasks.update
+NULL
+
+#' job_tasks.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$job_tasks.delete(uuid)
+#' @param uuid The UUID of the JobTask in question.
+#' @return JobTask object.
+#' @name job_tasks.delete
 NULL
 
-#' collections.index is a method defined in Arvados class.
+#' job_tasks.list is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.index(filters = NULL,
+#' @usage arv$job_tasks.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact", include_trash = NULL)
+#'     count = "exact")
 #' @param filters 
 #' @param where 
 #' @param order 
@@ -527,77 +615,116 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @param include_trash Include collections whose is_trashed attribute is true.
-#' @return CollectionList object.
-#' @name collections.index
+#' @return JobTaskList object.
+#' @name job_tasks.list
 NULL
 
-#' collections.create is a method defined in Arvados class.
+#' links.get is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.create(collection,
-#'     ensure_unique_name = "false")
-#' @param collection Collection object.
+#' @usage arv$links.get(uuid)
+#' @param uuid The UUID of the Link in question.
+#' @return Link object.
+#' @name links.get
+NULL
+
+#' links.create is a method defined in Arvados class.
+#' 
+#' @usage arv$links.create(link, ensure_unique_name = "false")
+#' @param link Link object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Collection object.
-#' @name collections.create
+#' @return Link object.
+#' @name links.create
 NULL
 
-#' collections.update is a method defined in Arvados class.
+#' links.update is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.update(collection,
-#'     uuid)
-#' @param collection Collection object.
-#' @param uuid The UUID of the Collection in question.
-#' @return Collection object.
-#' @name collections.update
+#' @usage arv$links.update(link, uuid)
+#' @param link Link object.
+#' @param uuid The UUID of the Link in question.
+#' @return Link object.
+#' @name links.update
 NULL
 
-#' collections.delete is a method defined in Arvados class.
+#' links.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.delete(uuid)
-#' @param uuid The UUID of the Collection in question.
-#' @return Collection object.
-#' @name collections.delete
+#' @usage arv$links.delete(uuid)
+#' @param uuid The UUID of the Link in question.
+#' @return Link object.
+#' @name links.delete
 NULL
 
-#' collections.provenance is a method defined in Arvados class.
+#' links.list is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.provenance(uuid)
-#' @param uuid 
-#' @return Collection object.
-#' @name collections.provenance
+#' @usage arv$links.list(filters = NULL,
+#'     where = NULL, order = NULL, select = NULL,
+#'     distinct = NULL, limit = "100", offset = "0",
+#'     count = "exact")
+#' @param filters 
+#' @param where 
+#' @param order 
+#' @param select 
+#' @param distinct 
+#' @param limit 
+#' @param offset 
+#' @param count 
+#' @return LinkList object.
+#' @name links.list
 NULL
 
-#' collections.used_by is a method defined in Arvados class.
+#' links.get_permissions is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.used_by(uuid)
+#' @usage arv$links.get_permissions(uuid)
 #' @param uuid 
-#' @return Collection object.
-#' @name collections.used_by
+#' @return Link object.
+#' @name links.get_permissions
 NULL
 
-#' collections.trash is a method defined in Arvados class.
+#' jobs.get is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.trash(uuid)
-#' @param uuid 
-#' @return Collection object.
-#' @name collections.trash
+#' @usage arv$jobs.get(uuid)
+#' @param uuid The UUID of the Job in question.
+#' @return Job object.
+#' @name jobs.get
 NULL
 
-#' collections.untrash is a method defined in Arvados class.
+#' jobs.create is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.untrash(uuid)
-#' @param uuid 
-#' @return Collection object.
-#' @name collections.untrash
+#' @usage arv$jobs.create(job, ensure_unique_name = "false",
+#'     find_or_create = "false", filters = NULL,
+#'     minimum_script_version = NULL, exclude_script_versions = NULL)
+#' @param job Job object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @param find_or_create 
+#' @param filters 
+#' @param minimum_script_version 
+#' @param exclude_script_versions 
+#' @return Job object.
+#' @name jobs.create
 NULL
 
-#' collections.list is a method defined in Arvados class.
+#' jobs.update is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.list(filters = NULL,
+#' @usage arv$jobs.update(job, uuid)
+#' @param job Job object.
+#' @param uuid The UUID of the Job in question.
+#' @return Job object.
+#' @name jobs.update
+NULL
+
+#' jobs.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$jobs.delete(uuid)
+#' @param uuid The UUID of the Job in question.
+#' @return Job object.
+#' @name jobs.delete
+NULL
+
+#' jobs.queue is a method defined in Arvados class.
+#' 
+#' @usage arv$jobs.queue(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact", include_trash = NULL)
+#'     count = "exact")
 #' @param filters 
 #' @param where 
 #' @param order 
@@ -606,41 +733,38 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @param include_trash Include collections whose is_trashed attribute is true.
-#' @return CollectionList object.
-#' @name collections.list
+#' @return Job object.
+#' @name jobs.queue
 NULL
 
-#' collections.show is a method defined in Arvados class.
+#' jobs.queue_size is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.show(uuid)
-#' @param uuid 
-#' @return Collection object.
-#' @name collections.show
+#' @usage arv$jobs.queue_size(NULL)
+#' @return Job object.
+#' @name jobs.queue_size
 NULL
 
-#' collections.destroy is a method defined in Arvados class.
+#' jobs.cancel is a method defined in Arvados class.
 #' 
-#' @usage arv$collections.destroy(uuid)
+#' @usage arv$jobs.cancel(uuid)
 #' @param uuid 
-#' @return Collection object.
-#' @name collections.destroy
+#' @return Job object.
+#' @name jobs.cancel
 NULL
 
-#' containers.get is a method defined in Arvados class.
+#' jobs.lock is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.get(uuid)
-#' @param uuid The UUID of the Container in question.
-#' @return Container object.
-#' @name containers.get
+#' @usage arv$jobs.lock(uuid)
+#' @param uuid 
+#' @return Job object.
+#' @name jobs.lock
 NULL
 
-#' containers.index is a method defined in Arvados class.
+#' jobs.list is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
+#' @usage arv$jobs.list(filters = NULL, where = NULL,
+#'     order = NULL, select = NULL, distinct = NULL,
+#'     limit = "100", offset = "0", count = "exact")
 #' @param filters 
 #' @param where 
 #' @param order 
@@ -649,72 +773,65 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return ContainerList object.
-#' @name containers.index
+#' @return JobList object.
+#' @name jobs.list
 NULL
 
-#' containers.create is a method defined in Arvados class.
+#' keep_disks.get is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.create(container,
+#' @usage arv$keep_disks.get(uuid)
+#' @param uuid The UUID of the KeepDisk in question.
+#' @return KeepDisk object.
+#' @name keep_disks.get
+NULL
+
+#' keep_disks.create is a method defined in Arvados class.
+#' 
+#' @usage arv$keep_disks.create(keepdisk,
 #'     ensure_unique_name = "false")
-#' @param container Container object.
+#' @param keepDisk KeepDisk object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Container object.
-#' @name containers.create
+#' @return KeepDisk object.
+#' @name keep_disks.create
 NULL
 
-#' containers.update is a method defined in Arvados class.
+#' keep_disks.update is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.update(container,
+#' @usage arv$keep_disks.update(keepdisk,
 #'     uuid)
-#' @param container Container object.
-#' @param uuid The UUID of the Container in question.
-#' @return Container object.
-#' @name containers.update
-NULL
-
-#' containers.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$containers.delete(uuid)
-#' @param uuid The UUID of the Container in question.
-#' @return Container object.
-#' @name containers.delete
-NULL
-
-#' containers.auth is a method defined in Arvados class.
-#' 
-#' @usage arv$containers.auth(uuid)
-#' @param uuid 
-#' @return Container object.
-#' @name containers.auth
+#' @param keepDisk KeepDisk object.
+#' @param uuid The UUID of the KeepDisk in question.
+#' @return KeepDisk object.
+#' @name keep_disks.update
 NULL
 
-#' containers.lock is a method defined in Arvados class.
+#' keep_disks.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.lock(uuid)
-#' @param uuid 
-#' @return Container object.
-#' @name containers.lock
+#' @usage arv$keep_disks.delete(uuid)
+#' @param uuid The UUID of the KeepDisk in question.
+#' @return KeepDisk object.
+#' @name keep_disks.delete
 NULL
 
-#' containers.unlock is a method defined in Arvados class.
+#' keep_disks.ping is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.unlock(uuid)
+#' @usage arv$keep_disks.ping(uuid = NULL,
+#'     ping_secret, node_uuid = NULL, filesystem_uuid = NULL,
+#'     service_host = NULL, service_port, service_ssl_flag)
 #' @param uuid 
-#' @return Container object.
-#' @name containers.unlock
-NULL
-
-#' containers.current is a method defined in Arvados class.
-#' 
-#' @usage arv$containers.current(NULL)
-#' @return Container object.
-#' @name containers.current
+#' @param ping_secret 
+#' @param node_uuid 
+#' @param filesystem_uuid 
+#' @param service_host 
+#' @param service_port 
+#' @param service_ssl_flag 
+#' @return KeepDisk object.
+#' @name keep_disks.ping
 NULL
 
-#' containers.list is a method defined in Arvados class.
+#' keep_disks.list is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.list(filters = NULL,
+#' @usage arv$keep_disks.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -726,37 +843,56 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return ContainerList object.
-#' @name containers.list
+#' @return KeepDiskList object.
+#' @name keep_disks.list
 NULL
 
-#' containers.show is a method defined in Arvados class.
+#' keep_services.get is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.show(uuid)
-#' @param uuid 
-#' @return Container object.
-#' @name containers.show
+#' @usage arv$keep_services.get(uuid)
+#' @param uuid The UUID of the KeepService in question.
+#' @return KeepService object.
+#' @name keep_services.get
 NULL
 
-#' containers.destroy is a method defined in Arvados class.
+#' keep_services.create is a method defined in Arvados class.
 #' 
-#' @usage arv$containers.destroy(uuid)
-#' @param uuid 
-#' @return Container object.
-#' @name containers.destroy
+#' @usage arv$keep_services.create(keepservice,
+#'     ensure_unique_name = "false")
+#' @param keepService KeepService object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return KeepService object.
+#' @name keep_services.create
 NULL
 
-#' humans.get is a method defined in Arvados class.
+#' keep_services.update is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.get(uuid)
-#' @param uuid The UUID of the Human in question.
-#' @return Human object.
-#' @name humans.get
+#' @usage arv$keep_services.update(keepservice,
+#'     uuid)
+#' @param keepService KeepService object.
+#' @param uuid The UUID of the KeepService in question.
+#' @return KeepService object.
+#' @name keep_services.update
+NULL
+
+#' keep_services.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$keep_services.delete(uuid)
+#' @param uuid The UUID of the KeepService in question.
+#' @return KeepService object.
+#' @name keep_services.delete
+NULL
+
+#' keep_services.accessible is a method defined in Arvados class.
+#' 
+#' @usage arv$keep_services.accessible(NULL)
+#' @return KeepService object.
+#' @name keep_services.accessible
 NULL
 
-#' humans.index is a method defined in Arvados class.
+#' keep_services.list is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.index(filters = NULL,
+#' @usage arv$keep_services.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -768,39 +904,49 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return HumanList object.
-#' @name humans.index
+#' @return KeepServiceList object.
+#' @name keep_services.list
 NULL
 
-#' humans.create is a method defined in Arvados class.
+#' pipeline_templates.get is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.create(human, ensure_unique_name = "false")
-#' @param human Human object.
+#' @usage arv$pipeline_templates.get(uuid)
+#' @param uuid The UUID of the PipelineTemplate in question.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.get
+NULL
+
+#' pipeline_templates.create is a method defined in Arvados class.
+#' 
+#' @usage arv$pipeline_templates.create(pipelinetemplate,
+#'     ensure_unique_name = "false")
+#' @param pipelineTemplate PipelineTemplate object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Human object.
-#' @name humans.create
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.create
 NULL
 
-#' humans.update is a method defined in Arvados class.
+#' pipeline_templates.update is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.update(human, uuid)
-#' @param human Human object.
-#' @param uuid The UUID of the Human in question.
-#' @return Human object.
-#' @name humans.update
+#' @usage arv$pipeline_templates.update(pipelinetemplate,
+#'     uuid)
+#' @param pipelineTemplate PipelineTemplate object.
+#' @param uuid The UUID of the PipelineTemplate in question.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.update
 NULL
 
-#' humans.delete is a method defined in Arvados class.
+#' pipeline_templates.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.delete(uuid)
-#' @param uuid The UUID of the Human in question.
-#' @return Human object.
-#' @name humans.delete
+#' @usage arv$pipeline_templates.delete(uuid)
+#' @param uuid The UUID of the PipelineTemplate in question.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.delete
 NULL
 
-#' humans.list is a method defined in Arvados class.
+#' pipeline_templates.list is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.list(filters = NULL,
+#' @usage arv$pipeline_templates.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -812,37 +958,57 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return HumanList object.
-#' @name humans.list
+#' @return PipelineTemplateList object.
+#' @name pipeline_templates.list
 NULL
 
-#' humans.show is a method defined in Arvados class.
+#' pipeline_instances.get is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.show(uuid)
-#' @param uuid 
-#' @return Human object.
-#' @name humans.show
+#' @usage arv$pipeline_instances.get(uuid)
+#' @param uuid The UUID of the PipelineInstance in question.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.get
 NULL
 
-#' humans.destroy is a method defined in Arvados class.
+#' pipeline_instances.create is a method defined in Arvados class.
 #' 
-#' @usage arv$humans.destroy(uuid)
-#' @param uuid 
-#' @return Human object.
-#' @name humans.destroy
+#' @usage arv$pipeline_instances.create(pipelineinstance,
+#'     ensure_unique_name = "false")
+#' @param pipelineInstance PipelineInstance object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.create
 NULL
 
-#' job_tasks.get is a method defined in Arvados class.
+#' pipeline_instances.update is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.get(uuid)
-#' @param uuid The UUID of the JobTask in question.
-#' @return JobTask object.
-#' @name job_tasks.get
+#' @usage arv$pipeline_instances.update(pipelineinstance,
+#'     uuid)
+#' @param pipelineInstance PipelineInstance object.
+#' @param uuid The UUID of the PipelineInstance in question.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.update
+NULL
+
+#' pipeline_instances.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$pipeline_instances.delete(uuid)
+#' @param uuid The UUID of the PipelineInstance in question.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.delete
+NULL
+
+#' pipeline_instances.cancel is a method defined in Arvados class.
+#' 
+#' @usage arv$pipeline_instances.cancel(uuid)
+#' @param uuid 
+#' @return PipelineInstance object.
+#' @name pipeline_instances.cancel
 NULL
 
-#' job_tasks.index is a method defined in Arvados class.
+#' pipeline_instances.list is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.index(filters = NULL,
+#' @usage arv$pipeline_instances.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -854,41 +1020,59 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return JobTaskList object.
-#' @name job_tasks.index
+#' @return PipelineInstanceList object.
+#' @name pipeline_instances.list
 NULL
 
-#' job_tasks.create is a method defined in Arvados class.
+#' nodes.get is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.create(job_task,
-#'     ensure_unique_name = "false")
-#' @param jobTask JobTask object.
+#' @usage arv$nodes.get(uuid)
+#' @param uuid The UUID of the Node in question.
+#' @return Node object.
+#' @name nodes.get
+NULL
+
+#' nodes.create is a method defined in Arvados class.
+#' 
+#' @usage arv$nodes.create(node, ensure_unique_name = "false",
+#'     assign_slot = NULL)
+#' @param node Node object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return JobTask object.
-#' @name job_tasks.create
+#' @param assign_slot assign slot and hostname
+#' @return Node object.
+#' @name nodes.create
 NULL
 
-#' job_tasks.update is a method defined in Arvados class.
+#' nodes.update is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.update(job_task,
-#'     uuid)
-#' @param jobTask JobTask object.
-#' @param uuid The UUID of the JobTask in question.
-#' @return JobTask object.
-#' @name job_tasks.update
+#' @usage arv$nodes.update(node, uuid, assign_slot = NULL)
+#' @param node Node object.
+#' @param uuid The UUID of the Node in question.
+#' @param assign_slot assign slot and hostname
+#' @return Node object.
+#' @name nodes.update
 NULL
 
-#' job_tasks.delete is a method defined in Arvados class.
+#' nodes.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.delete(uuid)
-#' @param uuid The UUID of the JobTask in question.
-#' @return JobTask object.
-#' @name job_tasks.delete
+#' @usage arv$nodes.delete(uuid)
+#' @param uuid The UUID of the Node in question.
+#' @return Node object.
+#' @name nodes.delete
 NULL
 
-#' job_tasks.list is a method defined in Arvados class.
+#' nodes.ping is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.list(filters = NULL,
+#' @usage arv$nodes.ping(uuid, ping_secret)
+#' @param uuid 
+#' @param ping_secret 
+#' @return Node object.
+#' @name nodes.ping
+NULL
+
+#' nodes.list is a method defined in Arvados class.
+#' 
+#' @usage arv$nodes.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -900,37 +1084,56 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return JobTaskList object.
-#' @name job_tasks.list
+#' @return NodeList object.
+#' @name nodes.list
 NULL
 
-#' job_tasks.show is a method defined in Arvados class.
+#' repositories.get is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.show(uuid)
-#' @param uuid 
-#' @return JobTask object.
-#' @name job_tasks.show
+#' @usage arv$repositories.get(uuid)
+#' @param uuid The UUID of the Repository in question.
+#' @return Repository object.
+#' @name repositories.get
 NULL
 
-#' job_tasks.destroy is a method defined in Arvados class.
+#' repositories.create is a method defined in Arvados class.
 #' 
-#' @usage arv$job_tasks.destroy(uuid)
-#' @param uuid 
-#' @return JobTask object.
-#' @name job_tasks.destroy
+#' @usage arv$repositories.create(repository,
+#'     ensure_unique_name = "false")
+#' @param repository Repository object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Repository object.
+#' @name repositories.create
 NULL
 
-#' links.get is a method defined in Arvados class.
+#' repositories.update is a method defined in Arvados class.
 #' 
-#' @usage arv$links.get(uuid)
-#' @param uuid The UUID of the Link in question.
-#' @return Link object.
-#' @name links.get
+#' @usage arv$repositories.update(repository,
+#'     uuid)
+#' @param repository Repository object.
+#' @param uuid The UUID of the Repository in question.
+#' @return Repository object.
+#' @name repositories.update
 NULL
 
-#' links.index is a method defined in Arvados class.
+#' repositories.delete is a method defined in Arvados class.
+#' 
+#' @usage arv$repositories.delete(uuid)
+#' @param uuid The UUID of the Repository in question.
+#' @return Repository object.
+#' @name repositories.delete
+NULL
+
+#' repositories.get_all_permissions is a method defined in Arvados class.
+#' 
+#' @usage arv$repositories.get_all_permissions(NULL)
+#' @return Repository object.
+#' @name repositories.get_all_permissions
+NULL
+
+#' repositories.list is a method defined in Arvados class.
 #' 
-#' @usage arv$links.index(filters = NULL,
+#' @usage arv$repositories.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -942,39 +1145,49 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return LinkList object.
-#' @name links.index
+#' @return RepositoryList object.
+#' @name repositories.list
 NULL
 
-#' links.create is a method defined in Arvados class.
+#' specimens.get is a method defined in Arvados class.
 #' 
-#' @usage arv$links.create(link, ensure_unique_name = "false")
-#' @param link Link object.
+#' @usage arv$specimens.get(uuid)
+#' @param uuid The UUID of the Specimen in question.
+#' @return Specimen object.
+#' @name specimens.get
+NULL
+
+#' specimens.create is a method defined in Arvados class.
+#' 
+#' @usage arv$specimens.create(specimen,
+#'     ensure_unique_name = "false")
+#' @param specimen Specimen object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Link object.
-#' @name links.create
+#' @return Specimen object.
+#' @name specimens.create
 NULL
 
-#' links.update is a method defined in Arvados class.
+#' specimens.update is a method defined in Arvados class.
 #' 
-#' @usage arv$links.update(link, uuid)
-#' @param link Link object.
-#' @param uuid The UUID of the Link in question.
-#' @return Link object.
-#' @name links.update
+#' @usage arv$specimens.update(specimen,
+#'     uuid)
+#' @param specimen Specimen object.
+#' @param uuid The UUID of the Specimen in question.
+#' @return Specimen object.
+#' @name specimens.update
 NULL
 
-#' links.delete is a method defined in Arvados class.
+#' specimens.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$links.delete(uuid)
-#' @param uuid The UUID of the Link in question.
-#' @return Link object.
-#' @name links.delete
+#' @usage arv$specimens.delete(uuid)
+#' @param uuid The UUID of the Specimen in question.
+#' @return Specimen object.
+#' @name specimens.delete
 NULL
 
-#' links.list is a method defined in Arvados class.
+#' specimens.list is a method defined in Arvados class.
 #' 
-#' @usage arv$links.list(filters = NULL,
+#' @usage arv$specimens.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -986,48 +1199,49 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return LinkList object.
-#' @name links.list
+#' @return SpecimenList object.
+#' @name specimens.list
 NULL
 
-#' links.show is a method defined in Arvados class.
+#' logs.get is a method defined in Arvados class.
 #' 
-#' @usage arv$links.show(uuid)
-#' @param uuid 
-#' @return Link object.
-#' @name links.show
+#' @usage arv$logs.get(uuid)
+#' @param uuid The UUID of the Log in question.
+#' @return Log object.
+#' @name logs.get
 NULL
 
-#' links.destroy is a method defined in Arvados class.
+#' logs.create is a method defined in Arvados class.
 #' 
-#' @usage arv$links.destroy(uuid)
-#' @param uuid 
-#' @return Link object.
-#' @name links.destroy
+#' @usage arv$logs.create(log, ensure_unique_name = "false")
+#' @param log Log object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Log object.
+#' @name logs.create
 NULL
 
-#' links.get_permissions is a method defined in Arvados class.
+#' logs.update is a method defined in Arvados class.
 #' 
-#' @usage arv$links.get_permissions(uuid)
-#' @param uuid 
-#' @return Link object.
-#' @name links.get_permissions
+#' @usage arv$logs.update(log, uuid)
+#' @param log Log object.
+#' @param uuid The UUID of the Log in question.
+#' @return Log object.
+#' @name logs.update
 NULL
 
-#' jobs.get is a method defined in Arvados class.
+#' logs.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.get(uuid)
-#' @param uuid The UUID of the Job in question.
-#' @return Job object.
-#' @name jobs.get
+#' @usage arv$logs.delete(uuid)
+#' @param uuid The UUID of the Log in question.
+#' @return Log object.
+#' @name logs.delete
 NULL
 
-#' jobs.index is a method defined in Arvados class.
+#' logs.list is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
+#' @usage arv$logs.list(filters = NULL, where = NULL,
+#'     order = NULL, select = NULL, distinct = NULL,
+#'     limit = "100", offset = "0", count = "exact")
 #' @param filters 
 #' @param where 
 #' @param order 
@@ -1036,45 +1250,47 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return JobList object.
-#' @name jobs.index
+#' @return LogList object.
+#' @name logs.list
 NULL
 
-#' jobs.create is a method defined in Arvados class.
+#' traits.get is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.create(job, ensure_unique_name = "false",
-#'     find_or_create = "false", filters = NULL,
-#'     minimum_script_version = NULL, exclude_script_versions = NULL)
-#' @param job Job object.
+#' @usage arv$traits.get(uuid)
+#' @param uuid The UUID of the Trait in question.
+#' @return Trait object.
+#' @name traits.get
+NULL
+
+#' traits.create is a method defined in Arvados class.
+#' 
+#' @usage arv$traits.create(trait, ensure_unique_name = "false")
+#' @param trait Trait object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @param find_or_create 
-#' @param filters 
-#' @param minimum_script_version 
-#' @param exclude_script_versions 
-#' @return Job object.
-#' @name jobs.create
+#' @return Trait object.
+#' @name traits.create
 NULL
 
-#' jobs.update is a method defined in Arvados class.
+#' traits.update is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.update(job, uuid)
-#' @param job Job object.
-#' @param uuid The UUID of the Job in question.
-#' @return Job object.
-#' @name jobs.update
+#' @usage arv$traits.update(trait, uuid)
+#' @param trait Trait object.
+#' @param uuid The UUID of the Trait in question.
+#' @return Trait object.
+#' @name traits.update
 NULL
 
-#' jobs.delete is a method defined in Arvados class.
+#' traits.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.delete(uuid)
-#' @param uuid The UUID of the Job in question.
-#' @return Job object.
-#' @name jobs.delete
+#' @usage arv$traits.delete(uuid)
+#' @param uuid The UUID of the Trait in question.
+#' @return Trait object.
+#' @name traits.delete
 NULL
 
-#' jobs.queue is a method defined in Arvados class.
+#' traits.list is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.queue(filters = NULL,
+#' @usage arv$traits.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -1086,77 +1302,64 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return Job object.
-#' @name jobs.queue
+#' @return TraitList object.
+#' @name traits.list
 NULL
 
-#' jobs.queue_size is a method defined in Arvados class.
+#' virtual_machines.get is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.queue_size(NULL)
-#' @return Job object.
-#' @name jobs.queue_size
+#' @usage arv$virtual_machines.get(uuid)
+#' @param uuid The UUID of the VirtualMachine in question.
+#' @return VirtualMachine object.
+#' @name virtual_machines.get
 NULL
 
-#' jobs.cancel is a method defined in Arvados class.
+#' virtual_machines.create is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.cancel(uuid)
-#' @param uuid 
-#' @return Job object.
-#' @name jobs.cancel
+#' @usage arv$virtual_machines.create(virtualmachine,
+#'     ensure_unique_name = "false")
+#' @param virtualMachine VirtualMachine object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return VirtualMachine object.
+#' @name virtual_machines.create
 NULL
 
-#' jobs.lock is a method defined in Arvados class.
+#' virtual_machines.update is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.lock(uuid)
-#' @param uuid 
-#' @return Job object.
-#' @name jobs.lock
+#' @usage arv$virtual_machines.update(virtualmachine,
+#'     uuid)
+#' @param virtualMachine VirtualMachine object.
+#' @param uuid The UUID of the VirtualMachine in question.
+#' @return VirtualMachine object.
+#' @name virtual_machines.update
 NULL
 
-#' jobs.list is a method defined in Arvados class.
+#' virtual_machines.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.list(filters = NULL, where = NULL,
-#'     order = NULL, select = NULL, distinct = NULL,
-#'     limit = "100", offset = "0", count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return JobList object.
-#' @name jobs.list
+#' @usage arv$virtual_machines.delete(uuid)
+#' @param uuid The UUID of the VirtualMachine in question.
+#' @return VirtualMachine object.
+#' @name virtual_machines.delete
 NULL
 
-#' jobs.show is a method defined in Arvados class.
+#' virtual_machines.logins is a method defined in Arvados class.
 #' 
-#' @usage arv$jobs.show(uuid)
+#' @usage arv$virtual_machines.logins(uuid)
 #' @param uuid 
-#' @return Job object.
-#' @name jobs.show
-NULL
-
-#' jobs.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$jobs.destroy(uuid)
-#' @param uuid 
-#' @return Job object.
-#' @name jobs.destroy
+#' @return VirtualMachine object.
+#' @name virtual_machines.logins
 NULL
 
-#' keep_disks.get is a method defined in Arvados class.
+#' virtual_machines.get_all_logins is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.get(uuid)
-#' @param uuid The UUID of the KeepDisk in question.
-#' @return KeepDisk object.
-#' @name keep_disks.get
+#' @usage arv$virtual_machines.get_all_logins(NULL)
+#' @return VirtualMachine object.
+#' @name virtual_machines.get_all_logins
 NULL
 
-#' keep_disks.index is a method defined in Arvados class.
+#' virtual_machines.list is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.index(filters = NULL,
+#' @usage arv$virtual_machines.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -1168,57 +1371,49 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return KeepDiskList object.
-#' @name keep_disks.index
+#' @return VirtualMachineList object.
+#' @name virtual_machines.list
 NULL
 
-#' keep_disks.create is a method defined in Arvados class.
+#' workflows.get is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.create(keep_disk,
-#'     ensure_unique_name = "false")
-#' @param keepDisk KeepDisk object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return KeepDisk object.
-#' @name keep_disks.create
+#' @usage arv$workflows.get(uuid)
+#' @param uuid The UUID of the Workflow in question.
+#' @return Workflow object.
+#' @name workflows.get
 NULL
 
-#' keep_disks.update is a method defined in Arvados class.
+#' workflows.create is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.update(keep_disk,
-#'     uuid)
-#' @param keepDisk KeepDisk object.
-#' @param uuid The UUID of the KeepDisk in question.
-#' @return KeepDisk object.
-#' @name keep_disks.update
+#' @usage arv$workflows.create(workflow,
+#'     ensure_unique_name = "false")
+#' @param workflow Workflow object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Workflow object.
+#' @name workflows.create
 NULL
 
-#' keep_disks.delete is a method defined in Arvados class.
+#' workflows.update is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.delete(uuid)
-#' @param uuid The UUID of the KeepDisk in question.
-#' @return KeepDisk object.
-#' @name keep_disks.delete
+#' @usage arv$workflows.update(workflow,
+#'     uuid)
+#' @param workflow Workflow object.
+#' @param uuid The UUID of the Workflow in question.
+#' @return Workflow object.
+#' @name workflows.update
 NULL
 
-#' keep_disks.ping is a method defined in Arvados class.
+#' workflows.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.ping(uuid = NULL,
-#'     ping_secret, node_uuid = NULL, filesystem_uuid = NULL,
-#'     service_host = NULL, service_port, service_ssl_flag)
-#' @param uuid 
-#' @param ping_secret 
-#' @param node_uuid 
-#' @param filesystem_uuid 
-#' @param service_host 
-#' @param service_port 
-#' @param service_ssl_flag 
-#' @return KeepDisk object.
-#' @name keep_disks.ping
+#' @usage arv$workflows.delete(uuid)
+#' @param uuid The UUID of the Workflow in question.
+#' @return Workflow object.
+#' @name workflows.delete
 NULL
 
-#' keep_disks.list is a method defined in Arvados class.
+#' workflows.list is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_disks.list(filters = NULL,
+#' @usage arv$workflows.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -1230,135 +1425,86 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return KeepDiskList object.
-#' @name keep_disks.list
-NULL
-
-#' keep_disks.show is a method defined in Arvados class.
-#' 
-#' @usage arv$keep_disks.show(uuid)
-#' @param uuid 
-#' @return KeepDisk object.
-#' @name keep_disks.show
-NULL
-
-#' keep_disks.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$keep_disks.destroy(uuid)
-#' @param uuid 
-#' @return KeepDisk object.
-#' @name keep_disks.destroy
-NULL
-
-#' keep_services.get is a method defined in Arvados class.
-#' 
-#' @usage arv$keep_services.get(uuid)
-#' @param uuid The UUID of the KeepService in question.
-#' @return KeepService object.
-#' @name keep_services.get
+#' @return WorkflowList object.
+#' @name workflows.list
 NULL
 
-#' keep_services.index is a method defined in Arvados class.
+#' groups.get is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_services.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return KeepServiceList object.
-#' @name keep_services.index
+#' @usage arv$groups.get(uuid)
+#' @param uuid The UUID of the Group in question.
+#' @return Group object.
+#' @name groups.get
 NULL
 
-#' keep_services.create is a method defined in Arvados class.
+#' groups.create is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_services.create(keep_service,
-#'     ensure_unique_name = "false")
-#' @param keepService KeepService object.
+#' @usage arv$groups.create(group, ensure_unique_name = "false")
+#' @param group Group object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return KeepService object.
-#' @name keep_services.create
-NULL
-
-#' keep_services.update is a method defined in Arvados class.
-#' 
-#' @usage arv$keep_services.update(keep_service,
-#'     uuid)
-#' @param keepService KeepService object.
-#' @param uuid The UUID of the KeepService in question.
-#' @return KeepService object.
-#' @name keep_services.update
+#' @return Group object.
+#' @name groups.create
 NULL
 
-#' keep_services.delete is a method defined in Arvados class.
+#' groups.update is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_services.delete(uuid)
-#' @param uuid The UUID of the KeepService in question.
-#' @return KeepService object.
-#' @name keep_services.delete
+#' @usage arv$groups.update(group, uuid)
+#' @param group Group object.
+#' @param uuid The UUID of the Group in question.
+#' @return Group object.
+#' @name groups.update
 NULL
 
-#' keep_services.accessible is a method defined in Arvados class.
+#' groups.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_services.accessible(NULL)
-#' @return KeepService object.
-#' @name keep_services.accessible
+#' @usage arv$groups.delete(uuid)
+#' @param uuid The UUID of the Group in question.
+#' @return Group object.
+#' @name groups.delete
 NULL
 
-#' keep_services.list is a method defined in Arvados class.
+#' groups.contents is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_services.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
+#' @usage arv$groups.contents(filters = NULL,
+#'     where = NULL, order = NULL, distinct = NULL,
+#'     limit = "100", offset = "0", count = "exact",
+#'     include_trash = NULL, uuid = NULL, recursive = NULL)
 #' @param filters 
 #' @param where 
 #' @param order 
-#' @param select 
 #' @param distinct 
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return KeepServiceList object.
-#' @name keep_services.list
-NULL
-
-#' keep_services.show is a method defined in Arvados class.
-#' 
-#' @usage arv$keep_services.show(uuid)
+#' @param include_trash Include items whose is_trashed attribute is true.
 #' @param uuid 
-#' @return KeepService object.
-#' @name keep_services.show
+#' @param recursive Include contents from child groups recursively.
+#' @return Group object.
+#' @name groups.contents
 NULL
 
-#' keep_services.destroy is a method defined in Arvados class.
+#' groups.trash is a method defined in Arvados class.
 #' 
-#' @usage arv$keep_services.destroy(uuid)
+#' @usage arv$groups.trash(uuid)
 #' @param uuid 
-#' @return KeepService object.
-#' @name keep_services.destroy
+#' @return Group object.
+#' @name groups.trash
 NULL
 
-#' pipeline_templates.get is a method defined in Arvados class.
+#' groups.untrash is a method defined in Arvados class.
 #' 
-#' @usage arv$pipeline_templates.get(uuid)
-#' @param uuid The UUID of the PipelineTemplate in question.
-#' @return PipelineTemplate object.
-#' @name pipeline_templates.get
+#' @usage arv$groups.untrash(uuid)
+#' @param uuid 
+#' @return Group object.
+#' @name groups.untrash
 NULL
 
-#' pipeline_templates.index is a method defined in Arvados class.
+#' groups.list is a method defined in Arvados class.
 #' 
-#' @usage arv$pipeline_templates.index(filters = NULL,
+#' @usage arv$groups.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
+#'     count = "exact", include_trash = NULL)
 #' @param filters 
 #' @param where 
 #' @param order 
@@ -1367,41 +1513,64 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return PipelineTemplateList object.
-#' @name pipeline_templates.index
+#' @param include_trash Include items whose is_trashed attribute is true.
+#' @return GroupList object.
+#' @name groups.list
 NULL
 
-#' pipeline_templates.create is a method defined in Arvados class.
+#' user_agreements.get is a method defined in Arvados class.
+#' 
+#' @usage arv$user_agreements.get(uuid)
+#' @param uuid The UUID of the UserAgreement in question.
+#' @return UserAgreement object.
+#' @name user_agreements.get
+NULL
+
+#' user_agreements.create is a method defined in Arvados class.
 #' 
-#' @usage arv$pipeline_templates.create(pipeline_template,
+#' @usage arv$user_agreements.create(useragreement,
 #'     ensure_unique_name = "false")
-#' @param pipelineTemplate PipelineTemplate object.
+#' @param userAgreement UserAgreement object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return PipelineTemplate object.
-#' @name pipeline_templates.create
+#' @return UserAgreement object.
+#' @name user_agreements.create
 NULL
 
-#' pipeline_templates.update is a method defined in Arvados class.
+#' user_agreements.update is a method defined in Arvados class.
 #' 
-#' @usage arv$pipeline_templates.update(pipeline_template,
+#' @usage arv$user_agreements.update(useragreement,
 #'     uuid)
-#' @param pipelineTemplate PipelineTemplate object.
-#' @param uuid The UUID of the PipelineTemplate in question.
-#' @return PipelineTemplate object.
-#' @name pipeline_templates.update
+#' @param userAgreement UserAgreement object.
+#' @param uuid The UUID of the UserAgreement in question.
+#' @return UserAgreement object.
+#' @name user_agreements.update
 NULL
 
-#' pipeline_templates.delete is a method defined in Arvados class.
+#' user_agreements.delete is a method defined in Arvados class.
 #' 
-#' @usage arv$pipeline_templates.delete(uuid)
-#' @param uuid The UUID of the PipelineTemplate in question.
-#' @return PipelineTemplate object.
-#' @name pipeline_templates.delete
+#' @usage arv$user_agreements.delete(uuid)
+#' @param uuid The UUID of the UserAgreement in question.
+#' @return UserAgreement object.
+#' @name user_agreements.delete
 NULL
 
-#' pipeline_templates.list is a method defined in Arvados class.
+#' user_agreements.signatures is a method defined in Arvados class.
 #' 
-#' @usage arv$pipeline_templates.list(filters = NULL,
+#' @usage arv$user_agreements.signatures(NULL)
+#' @return UserAgreement object.
+#' @name user_agreements.signatures
+NULL
+
+#' user_agreements.sign is a method defined in Arvados class.
+#' 
+#' @usage arv$user_agreements.sign(NULL)
+#' @return UserAgreement object.
+#' @name user_agreements.sign
+NULL
+
+#' user_agreements.list is a method defined in Arvados class.
+#' 
+#' @usage arv$user_agreements.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
@@ -1413,3002 +1582,114 @@ NULL
 #' @param limit 
 #' @param offset 
 #' @param count 
-#' @return PipelineTemplateList object.
-#' @name pipeline_templates.list
-NULL
-
-#' pipeline_templates.show is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_templates.show(uuid)
-#' @param uuid 
-#' @return PipelineTemplate object.
-#' @name pipeline_templates.show
-NULL
-
-#' pipeline_templates.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_templates.destroy(uuid)
-#' @param uuid 
-#' @return PipelineTemplate object.
-#' @name pipeline_templates.destroy
-NULL
-
-#' pipeline_instances.get is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.get(uuid)
-#' @param uuid The UUID of the PipelineInstance in question.
-#' @return PipelineInstance object.
-#' @name pipeline_instances.get
-NULL
-
-#' pipeline_instances.index is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return PipelineInstanceList object.
-#' @name pipeline_instances.index
-NULL
-
-#' pipeline_instances.create is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.create(pipeline_instance,
-#'     ensure_unique_name = "false")
-#' @param pipelineInstance PipelineInstance object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return PipelineInstance object.
-#' @name pipeline_instances.create
-NULL
-
-#' pipeline_instances.update is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.update(pipeline_instance,
-#'     uuid)
-#' @param pipelineInstance PipelineInstance object.
-#' @param uuid The UUID of the PipelineInstance in question.
-#' @return PipelineInstance object.
-#' @name pipeline_instances.update
-NULL
-
-#' pipeline_instances.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.delete(uuid)
-#' @param uuid The UUID of the PipelineInstance in question.
-#' @return PipelineInstance object.
-#' @name pipeline_instances.delete
-NULL
-
-#' pipeline_instances.cancel is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.cancel(uuid)
-#' @param uuid 
-#' @return PipelineInstance object.
-#' @name pipeline_instances.cancel
-NULL
-
-#' pipeline_instances.list is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return PipelineInstanceList object.
-#' @name pipeline_instances.list
-NULL
-
-#' pipeline_instances.show is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.show(uuid)
-#' @param uuid 
-#' @return PipelineInstance object.
-#' @name pipeline_instances.show
-NULL
-
-#' pipeline_instances.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$pipeline_instances.destroy(uuid)
-#' @param uuid 
-#' @return PipelineInstance object.
-#' @name pipeline_instances.destroy
-NULL
-
-#' nodes.get is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.get(uuid)
-#' @param uuid The UUID of the Node in question.
-#' @return Node object.
-#' @name nodes.get
-NULL
-
-#' nodes.index is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return NodeList object.
-#' @name nodes.index
-NULL
-
-#' nodes.create is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.create(node, ensure_unique_name = "false",
-#'     assign_slot = NULL)
-#' @param node Node object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @param assign_slot assign slot and hostname
-#' @return Node object.
-#' @name nodes.create
-NULL
-
-#' nodes.update is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.update(node, uuid, assign_slot = NULL)
-#' @param node Node object.
-#' @param uuid The UUID of the Node in question.
-#' @param assign_slot assign slot and hostname
-#' @return Node object.
-#' @name nodes.update
-NULL
-
-#' nodes.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.delete(uuid)
-#' @param uuid The UUID of the Node in question.
-#' @return Node object.
-#' @name nodes.delete
-NULL
-
-#' nodes.ping is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.ping(uuid, ping_secret)
-#' @param uuid 
-#' @param ping_secret 
-#' @return Node object.
-#' @name nodes.ping
-NULL
-
-#' nodes.list is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return NodeList object.
-#' @name nodes.list
-NULL
-
-#' nodes.show is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.show(uuid)
-#' @param uuid 
-#' @return Node object.
-#' @name nodes.show
-NULL
-
-#' nodes.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$nodes.destroy(uuid)
-#' @param uuid 
-#' @return Node object.
-#' @name nodes.destroy
-NULL
-
-#' repositories.get is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.get(uuid)
-#' @param uuid The UUID of the Repository in question.
-#' @return Repository object.
-#' @name repositories.get
-NULL
-
-#' repositories.index is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return RepositoryList object.
-#' @name repositories.index
-NULL
-
-#' repositories.create is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.create(repository,
-#'     ensure_unique_name = "false")
-#' @param repository Repository object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Repository object.
-#' @name repositories.create
-NULL
-
-#' repositories.update is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.update(repository,
-#'     uuid)
-#' @param repository Repository object.
-#' @param uuid The UUID of the Repository in question.
-#' @return Repository object.
-#' @name repositories.update
-NULL
-
-#' repositories.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.delete(uuid)
-#' @param uuid The UUID of the Repository in question.
-#' @return Repository object.
-#' @name repositories.delete
-NULL
-
-#' repositories.get_all_permissions is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.get_all_permissions(NULL)
-#' @return Repository object.
-#' @name repositories.get_all_permissions
+#' @return UserAgreementList object.
+#' @name user_agreements.list
 NULL
 
-#' repositories.list is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return RepositoryList object.
-#' @name repositories.list
-NULL
-
-#' repositories.show is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.show(uuid)
-#' @param uuid 
-#' @return Repository object.
-#' @name repositories.show
-NULL
-
-#' repositories.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$repositories.destroy(uuid)
-#' @param uuid 
-#' @return Repository object.
-#' @name repositories.destroy
-NULL
-
-#' specimens.get is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.get(uuid)
-#' @param uuid The UUID of the Specimen in question.
-#' @return Specimen object.
-#' @name specimens.get
-NULL
-
-#' specimens.index is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return SpecimenList object.
-#' @name specimens.index
-NULL
-
-#' specimens.create is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.create(specimen,
-#'     ensure_unique_name = "false")
-#' @param specimen Specimen object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Specimen object.
-#' @name specimens.create
-NULL
-
-#' specimens.update is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.update(specimen,
-#'     uuid)
-#' @param specimen Specimen object.
-#' @param uuid The UUID of the Specimen in question.
-#' @return Specimen object.
-#' @name specimens.update
-NULL
-
-#' specimens.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.delete(uuid)
-#' @param uuid The UUID of the Specimen in question.
-#' @return Specimen object.
-#' @name specimens.delete
-NULL
-
-#' specimens.list is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return SpecimenList object.
-#' @name specimens.list
-NULL
-
-#' specimens.show is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.show(uuid)
-#' @param uuid 
-#' @return Specimen object.
-#' @name specimens.show
-NULL
-
-#' specimens.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$specimens.destroy(uuid)
-#' @param uuid 
-#' @return Specimen object.
-#' @name specimens.destroy
-NULL
-
-#' logs.get is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.get(uuid)
-#' @param uuid The UUID of the Log in question.
-#' @return Log object.
-#' @name logs.get
-NULL
-
-#' logs.index is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return LogList object.
-#' @name logs.index
-NULL
-
-#' logs.create is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.create(log, ensure_unique_name = "false")
-#' @param log Log object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Log object.
-#' @name logs.create
-NULL
-
-#' logs.update is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.update(log, uuid)
-#' @param log Log object.
-#' @param uuid The UUID of the Log in question.
-#' @return Log object.
-#' @name logs.update
-NULL
-
-#' logs.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.delete(uuid)
-#' @param uuid The UUID of the Log in question.
-#' @return Log object.
-#' @name logs.delete
-NULL
-
-#' logs.list is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.list(filters = NULL, where = NULL,
-#'     order = NULL, select = NULL, distinct = NULL,
-#'     limit = "100", offset = "0", count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return LogList object.
-#' @name logs.list
-NULL
-
-#' logs.show is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.show(uuid)
-#' @param uuid 
-#' @return Log object.
-#' @name logs.show
-NULL
-
-#' logs.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$logs.destroy(uuid)
-#' @param uuid 
-#' @return Log object.
-#' @name logs.destroy
-NULL
-
-#' traits.get is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.get(uuid)
-#' @param uuid The UUID of the Trait in question.
-#' @return Trait object.
-#' @name traits.get
-NULL
-
-#' traits.index is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return TraitList object.
-#' @name traits.index
-NULL
-
-#' traits.create is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.create(trait, ensure_unique_name = "false")
-#' @param trait Trait object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Trait object.
-#' @name traits.create
-NULL
-
-#' traits.update is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.update(trait, uuid)
-#' @param trait Trait object.
-#' @param uuid The UUID of the Trait in question.
-#' @return Trait object.
-#' @name traits.update
-NULL
-
-#' traits.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.delete(uuid)
-#' @param uuid The UUID of the Trait in question.
-#' @return Trait object.
-#' @name traits.delete
-NULL
-
-#' traits.list is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return TraitList object.
-#' @name traits.list
-NULL
-
-#' traits.show is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.show(uuid)
-#' @param uuid 
-#' @return Trait object.
-#' @name traits.show
-NULL
-
-#' traits.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$traits.destroy(uuid)
-#' @param uuid 
-#' @return Trait object.
-#' @name traits.destroy
-NULL
-
-#' virtual_machines.get is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.get(uuid)
-#' @param uuid The UUID of the VirtualMachine in question.
-#' @return VirtualMachine object.
-#' @name virtual_machines.get
-NULL
-
-#' virtual_machines.index is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return VirtualMachineList object.
-#' @name virtual_machines.index
-NULL
-
-#' virtual_machines.create is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.create(virtual_machine,
-#'     ensure_unique_name = "false")
-#' @param virtualMachine VirtualMachine object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return VirtualMachine object.
-#' @name virtual_machines.create
-NULL
-
-#' virtual_machines.update is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.update(virtual_machine,
-#'     uuid)
-#' @param virtualMachine VirtualMachine object.
-#' @param uuid The UUID of the VirtualMachine in question.
-#' @return VirtualMachine object.
-#' @name virtual_machines.update
-NULL
-
-#' virtual_machines.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.delete(uuid)
-#' @param uuid The UUID of the VirtualMachine in question.
-#' @return VirtualMachine object.
-#' @name virtual_machines.delete
-NULL
-
-#' virtual_machines.logins is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.logins(uuid)
-#' @param uuid 
-#' @return VirtualMachine object.
-#' @name virtual_machines.logins
-NULL
-
-#' virtual_machines.get_all_logins is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.get_all_logins(NULL)
-#' @return VirtualMachine object.
-#' @name virtual_machines.get_all_logins
-NULL
-
-#' virtual_machines.list is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return VirtualMachineList object.
-#' @name virtual_machines.list
-NULL
-
-#' virtual_machines.show is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.show(uuid)
-#' @param uuid 
-#' @return VirtualMachine object.
-#' @name virtual_machines.show
-NULL
-
-#' virtual_machines.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$virtual_machines.destroy(uuid)
-#' @param uuid 
-#' @return VirtualMachine object.
-#' @name virtual_machines.destroy
-NULL
-
-#' workflows.get is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.get(uuid)
-#' @param uuid The UUID of the Workflow in question.
-#' @return Workflow object.
-#' @name workflows.get
-NULL
-
-#' workflows.index is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return WorkflowList object.
-#' @name workflows.index
-NULL
-
-#' workflows.create is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.create(workflow,
-#'     ensure_unique_name = "false")
-#' @param workflow Workflow object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Workflow object.
-#' @name workflows.create
-NULL
-
-#' workflows.update is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.update(workflow,
-#'     uuid)
-#' @param workflow Workflow object.
-#' @param uuid The UUID of the Workflow in question.
-#' @return Workflow object.
-#' @name workflows.update
-NULL
-
-#' workflows.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.delete(uuid)
-#' @param uuid The UUID of the Workflow in question.
-#' @return Workflow object.
-#' @name workflows.delete
-NULL
-
-#' workflows.list is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return WorkflowList object.
-#' @name workflows.list
-NULL
-
-#' workflows.show is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.show(uuid)
-#' @param uuid 
-#' @return Workflow object.
-#' @name workflows.show
-NULL
-
-#' workflows.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$workflows.destroy(uuid)
-#' @param uuid 
-#' @return Workflow object.
-#' @name workflows.destroy
-NULL
-
-#' groups.get is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.get(uuid)
-#' @param uuid The UUID of the Group in question.
-#' @return Group object.
-#' @name groups.get
-NULL
-
-#' groups.index is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact", include_trash = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @param include_trash Include items whose is_trashed attribute is true.
-#' @return GroupList object.
-#' @name groups.index
-NULL
-
-#' groups.create is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.create(group, ensure_unique_name = "false")
-#' @param group Group object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return Group object.
-#' @name groups.create
-NULL
-
-#' groups.update is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.update(group, uuid)
-#' @param group Group object.
-#' @param uuid The UUID of the Group in question.
-#' @return Group object.
-#' @name groups.update
-NULL
-
-#' groups.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.delete(uuid)
-#' @param uuid The UUID of the Group in question.
-#' @return Group object.
-#' @name groups.delete
-NULL
-
-#' groups.contents is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.contents(filters = NULL,
-#'     where = NULL, order = NULL, distinct = NULL,
-#'     limit = "100", offset = "0", count = "exact",
-#'     include_trash = NULL, uuid = NULL, recursive = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @param include_trash Include items whose is_trashed attribute is true.
-#' @param uuid 
-#' @param recursive Include contents from child groups recursively.
-#' @return Group object.
-#' @name groups.contents
-NULL
-
-#' groups.trash is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.trash(uuid)
-#' @param uuid 
-#' @return Group object.
-#' @name groups.trash
-NULL
-
-#' groups.untrash is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.untrash(uuid)
-#' @param uuid 
-#' @return Group object.
-#' @name groups.untrash
-NULL
-
-#' groups.list is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact", include_trash = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @param include_trash Include items whose is_trashed attribute is true.
-#' @return GroupList object.
-#' @name groups.list
-NULL
-
-#' groups.show is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.show(uuid)
-#' @param uuid 
-#' @return Group object.
-#' @name groups.show
-NULL
-
-#' groups.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$groups.destroy(uuid)
-#' @param uuid 
-#' @return Group object.
-#' @name groups.destroy
-NULL
-
-#' user_agreements.get is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.get(uuid)
-#' @param uuid The UUID of the UserAgreement in question.
-#' @return UserAgreement object.
-#' @name user_agreements.get
-NULL
-
-#' user_agreements.index is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.index(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return UserAgreementList object.
-#' @name user_agreements.index
-NULL
-
-#' user_agreements.create is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.create(user_agreement,
-#'     ensure_unique_name = "false")
-#' @param userAgreement UserAgreement object.
-#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @return UserAgreement object.
-#' @name user_agreements.create
-NULL
-
-#' user_agreements.update is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.update(user_agreement,
-#'     uuid)
-#' @param userAgreement UserAgreement object.
-#' @param uuid The UUID of the UserAgreement in question.
-#' @return UserAgreement object.
-#' @name user_agreements.update
-NULL
-
-#' user_agreements.delete is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.delete(uuid)
-#' @param uuid The UUID of the UserAgreement in question.
-#' @return UserAgreement object.
-#' @name user_agreements.delete
-NULL
-
-#' user_agreements.signatures is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.signatures(NULL)
-#' @return UserAgreement object.
-#' @name user_agreements.signatures
-NULL
-
-#' user_agreements.sign is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.sign(NULL)
-#' @return UserAgreement object.
-#' @name user_agreements.sign
-NULL
-
-#' user_agreements.list is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.list(filters = NULL,
-#'     where = NULL, order = NULL, select = NULL,
-#'     distinct = NULL, limit = "100", offset = "0",
-#'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
-#' @return UserAgreementList object.
-#' @name user_agreements.list
-NULL
-
-#' user_agreements.new is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.new(NULL)
-#' @return UserAgreement object.
-#' @name user_agreements.new
-NULL
-
-#' user_agreements.show is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.show(uuid)
-#' @param uuid 
-#' @return UserAgreement object.
-#' @name user_agreements.show
-NULL
-
-#' user_agreements.destroy is a method defined in Arvados class.
-#' 
-#' @usage arv$user_agreements.destroy(uuid)
-#' @param uuid 
-#' @return UserAgreement object.
-#' @name user_agreements.destroy
-NULL
-
-#' @export
-Arvados <- R6::R6Class(
-
-       "Arvados",
-
-       public = list(
-
-               initialize = function(authToken = NULL, hostName = NULL, numRetries = 0)
-               {
-                       if(!is.null(hostName))
-                               Sys.setenv(ARVADOS_API_HOST = hostName)
-
-                       if(!is.null(authToken))
-                               Sys.setenv(ARVADOS_API_TOKEN = authToken)
-
-                       hostName <- Sys.getenv("ARVADOS_API_HOST")
-                       token    <- Sys.getenv("ARVADOS_API_TOKEN")
-
-                       if(hostName == "" | token == "")
-                               stop(paste("Please provide host name and authentification token",
-                                                  "or set ARVADOS_API_HOST and ARVADOS_API_TOKEN",
-                                                  "environment variables."))
-
-                       private$token <- token
-                       private$host  <- paste0("https://", hostName, "/arvados/v1/")
-                       private$numRetries <- numRetries
-                       private$REST <- RESTService$new(token, hostName,
-                                                       HttpRequest$new(), HttpParser$new(),
-                                                       numRetries)
-
-               },
-
-               users.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
-               {
-                       endPoint <- stringr::str_interp("users")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       UserList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               users.create = function(user, ensure_unique_name = "false")
-               {
-                       endPoint <- stringr::str_interp("users")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- user$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.update = function(user, uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- user$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.delete = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.current = function()
-               {
-                       endPoint <- stringr::str_interp("users/current")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- NULL
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.system = function()
-               {
-                       endPoint <- stringr::str_interp("users/system")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- NULL
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.activate = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}/activate")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.setup = function(user = NULL, openid_prefix = NULL,
-                       repo_name = NULL, vm_uuid = NULL, send_notification_email = "false")
-               {
-                       endPoint <- stringr::str_interp("users/setup")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(user = user, openid_prefix = openid_prefix,
-                               repo_name = repo_name, vm_uuid = vm_uuid,
-                               send_notification_email = send_notification_email)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.unsetup = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}/unsetup")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.update_uuid = function(uuid, new_uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}/update_uuid")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid, new_uuid = new_uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.list = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
-               {
-                       endPoint <- stringr::str_interp("users")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       UserList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               users.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               users.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("users/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       User$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, email = resource$email,
-                               first_name = resource$first_name, last_name = resource$last_name,
-                               identity_url = resource$identity_url, is_admin = resource$is_admin,
-                               prefs = resource$prefs, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               is_active = resource$is_active, username = resource$username)
-               },
-
-               api_client_authorizations.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorizationList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               api_client_authorizations.create = function(api_client_authorization,
-                       ensure_unique_name = "false")
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- api_client_authorization$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.update = function(api_client_authorization, uuid)
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- api_client_authorization$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.delete = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.create_system_auth = function(api_client_id = NULL, scopes = NULL)
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/create_system_auth")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(api_client_id = api_client_id,
-                               scopes = scopes)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.current = function()
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/current")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- NULL
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorizationList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               api_client_authorizations.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_client_authorizations.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientAuthorization$new(uuid = resource$uuid,
-                               etag = resource$etag, api_token = resource$api_token,
-                               api_client_id = resource$api_client_id, user_id = resource$user_id,
-                               created_by_ip_address = resource$created_by_ip_address,
-                               last_used_by_ip_address = resource$last_used_by_ip_address,
-                               last_used_at = resource$last_used_at, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               default_owner_uuid = resource$default_owner_uuid,
-                               scopes = resource$scopes)
-               },
-
-               api_clients.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_clients/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               url_prefix = resource$url_prefix, created_at = resource$created_at,
-                               updated_at = resource$updated_at, is_trusted = resource$is_trusted)
-               },
-
-               api_clients.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("api_clients")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               api_clients.create = function(api_client, ensure_unique_name = "false")
-               {
-                       endPoint <- stringr::str_interp("api_clients")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- api_client$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               url_prefix = resource$url_prefix, created_at = resource$created_at,
-                               updated_at = resource$updated_at, is_trusted = resource$is_trusted)
-               },
-
-               api_clients.update = function(api_client, uuid)
-               {
-                       endPoint <- stringr::str_interp("api_clients/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- api_client$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               url_prefix = resource$url_prefix, created_at = resource$created_at,
-                               updated_at = resource$updated_at, is_trusted = resource$is_trusted)
-               },
-
-               api_clients.delete = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_clients/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               url_prefix = resource$url_prefix, created_at = resource$created_at,
-                               updated_at = resource$updated_at, is_trusted = resource$is_trusted)
-               },
-
-               api_clients.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("api_clients")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClientList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               api_clients.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_clients/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               url_prefix = resource$url_prefix, created_at = resource$created_at,
-                               updated_at = resource$updated_at, is_trusted = resource$is_trusted)
-               },
-
-               api_clients.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("api_clients/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               url_prefix = resource$url_prefix, created_at = resource$created_at,
-                               updated_at = resource$updated_at, is_trusted = resource$is_trusted)
-               },
-
-               container_requests.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("container_requests/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequest$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_at = resource$modified_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, state = resource$state,
-                               requesting_container_uuid = resource$requesting_container_uuid,
-                               container_uuid = resource$container_uuid,
-                               container_count_max = resource$container_count_max,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               container_image = resource$container_image,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               priority = resource$priority, expires_at = resource$expires_at,
-                               filters = resource$filters, updated_at = resource$updated_at,
-                               container_count = resource$container_count,
-                               use_existing = resource$use_existing, scheduling_parameters = resource$scheduling_parameters,
-                               output_uuid = resource$output_uuid, log_uuid = resource$log_uuid,
-                               output_name = resource$output_name, output_ttl = resource$output_ttl)
-               },
-
-               container_requests.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("container_requests")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequestList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               container_requests.create = function(container_request,
-                       ensure_unique_name = "false")
-               {
-                       endPoint <- stringr::str_interp("container_requests")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- container_request$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequest$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_at = resource$modified_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, state = resource$state,
-                               requesting_container_uuid = resource$requesting_container_uuid,
-                               container_uuid = resource$container_uuid,
-                               container_count_max = resource$container_count_max,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               container_image = resource$container_image,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               priority = resource$priority, expires_at = resource$expires_at,
-                               filters = resource$filters, updated_at = resource$updated_at,
-                               container_count = resource$container_count,
-                               use_existing = resource$use_existing, scheduling_parameters = resource$scheduling_parameters,
-                               output_uuid = resource$output_uuid, log_uuid = resource$log_uuid,
-                               output_name = resource$output_name, output_ttl = resource$output_ttl)
-               },
-
-               container_requests.update = function(container_request, uuid)
-               {
-                       endPoint <- stringr::str_interp("container_requests/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- container_request$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequest$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_at = resource$modified_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, state = resource$state,
-                               requesting_container_uuid = resource$requesting_container_uuid,
-                               container_uuid = resource$container_uuid,
-                               container_count_max = resource$container_count_max,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               container_image = resource$container_image,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               priority = resource$priority, expires_at = resource$expires_at,
-                               filters = resource$filters, updated_at = resource$updated_at,
-                               container_count = resource$container_count,
-                               use_existing = resource$use_existing, scheduling_parameters = resource$scheduling_parameters,
-                               output_uuid = resource$output_uuid, log_uuid = resource$log_uuid,
-                               output_name = resource$output_name, output_ttl = resource$output_ttl)
-               },
-
-               container_requests.delete = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("container_requests/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequest$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_at = resource$modified_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, state = resource$state,
-                               requesting_container_uuid = resource$requesting_container_uuid,
-                               container_uuid = resource$container_uuid,
-                               container_count_max = resource$container_count_max,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               container_image = resource$container_image,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               priority = resource$priority, expires_at = resource$expires_at,
-                               filters = resource$filters, updated_at = resource$updated_at,
-                               container_count = resource$container_count,
-                               use_existing = resource$use_existing, scheduling_parameters = resource$scheduling_parameters,
-                               output_uuid = resource$output_uuid, log_uuid = resource$log_uuid,
-                               output_name = resource$output_name, output_ttl = resource$output_ttl)
-               },
-
-               container_requests.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("container_requests")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequestList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               container_requests.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("container_requests/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequest$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_at = resource$modified_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, state = resource$state,
-                               requesting_container_uuid = resource$requesting_container_uuid,
-                               container_uuid = resource$container_uuid,
-                               container_count_max = resource$container_count_max,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               container_image = resource$container_image,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               priority = resource$priority, expires_at = resource$expires_at,
-                               filters = resource$filters, updated_at = resource$updated_at,
-                               container_count = resource$container_count,
-                               use_existing = resource$use_existing, scheduling_parameters = resource$scheduling_parameters,
-                               output_uuid = resource$output_uuid, log_uuid = resource$log_uuid,
-                               output_name = resource$output_name, output_ttl = resource$output_ttl)
-               },
-
-               container_requests.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("container_requests/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerRequest$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_at = resource$modified_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, state = resource$state,
-                               requesting_container_uuid = resource$requesting_container_uuid,
-                               container_uuid = resource$container_uuid,
-                               container_count_max = resource$container_count_max,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               container_image = resource$container_image,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               priority = resource$priority, expires_at = resource$expires_at,
-                               filters = resource$filters, updated_at = resource$updated_at,
-                               container_count = resource$container_count,
-                               use_existing = resource$use_existing, scheduling_parameters = resource$scheduling_parameters,
-                               output_uuid = resource$output_uuid, log_uuid = resource$log_uuid,
-                               output_name = resource$output_name, output_ttl = resource$output_ttl)
-               },
-
-               authorized_keys.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               key_type = resource$key_type, authorized_user_uuid = resource$authorized_user_uuid,
-                               public_key = resource$public_key, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
-               },
-
-               authorized_keys.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("authorized_keys")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKeyList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               authorized_keys.create = function(authorized_key,
-                       ensure_unique_name = "false")
-               {
-                       endPoint <- stringr::str_interp("authorized_keys")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- authorized_key$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               key_type = resource$key_type, authorized_user_uuid = resource$authorized_user_uuid,
-                               public_key = resource$public_key, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
-               },
-
-               authorized_keys.update = function(authorized_key, uuid)
-               {
-                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- authorized_key$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               key_type = resource$key_type, authorized_user_uuid = resource$authorized_user_uuid,
-                               public_key = resource$public_key, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
-               },
-
-               authorized_keys.delete = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               key_type = resource$key_type, authorized_user_uuid = resource$authorized_user_uuid,
-                               public_key = resource$public_key, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
-               },
-
-               authorized_keys.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("authorized_keys")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKeyList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               authorized_keys.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               key_type = resource$key_type, authorized_user_uuid = resource$authorized_user_uuid,
-                               public_key = resource$public_key, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
-               },
-
-               authorized_keys.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               key_type = resource$key_type, authorized_user_uuid = resource$authorized_user_uuid,
-                               public_key = resource$public_key, expires_at = resource$expires_at,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
-               },
-
-               collections.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
-
-               collections.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact", include_trash = NULL)
-               {
-                       endPoint <- stringr::str_interp("collections")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count,
-                               include_trash = include_trash)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       CollectionList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               collections.create = function(collection, ensure_unique_name = "false")
-               {
-                       endPoint <- stringr::str_interp("collections")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- collection$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
-
-               collections.update = function(collection, uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- collection$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
-
-               collections.delete = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+#' user_agreements.new is a method defined in Arvados class.
+#' 
+#' @usage arv$user_agreements.new(NULL)
+#' @return UserAgreement object.
+#' @name user_agreements.new
+NULL
 
-               collections.provenance = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}/provenance")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+#' @export
+Arvados <- R6::R6Class(
 
-               collections.used_by = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}/used_by")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+       "Arvados",
 
-               collections.trash = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}/trash")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+       public = list(
 
-               collections.untrash = function(uuid)
+               initialize = function(authToken = NULL, hostName = NULL, numRetries = 0)
                {
-                       endPoint <- stringr::str_interp("collections/${uuid}/untrash")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+                       if(!is.null(hostName))
+                               Sys.setenv(ARVADOS_API_HOST = hostName)
 
-               collections.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact", include_trash = NULL)
-               {
-                       endPoint <- stringr::str_interp("collections")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count,
-                               include_trash = include_trash)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       CollectionList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
+                       if(!is.null(authToken))
+                               Sys.setenv(ARVADOS_API_TOKEN = authToken)
 
-               collections.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+                       hostName <- Sys.getenv("ARVADOS_API_HOST")
+                       token    <- Sys.getenv("ARVADOS_API_TOKEN")
 
-               collections.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("collections/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       collection <- Collection$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-                       
-                       collection$setRESTService(private$REST)
-                       collection
-               },
+                       if(hostName == "" | token == "")
+                               stop(paste("Please provide host name and authentification token",
+                                                  "or set ARVADOS_API_HOST and ARVADOS_API_TOKEN",
+                                                  "environment variables."))
 
-               containers.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("containers/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
-               },
+                       private$token <- token
+                       private$host  <- paste0("https://", hostName, "/arvados/v1/")
+                       private$numRetries <- numRetries
+                       private$REST <- RESTService$new(token, hostName,
+                                                       HttpRequest$new(), HttpParser$new(),
+                                                       numRetries)
 
-               containers.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("containers")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       ContainerList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
                },
 
-               containers.create = function(container, ensure_unique_name = "false")
+               projects.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("containers")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- container$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       self$groups.get(uuid)
                },
 
-               containers.update = function(container, uuid)
+               projects.create = function(group, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- container$toJSON()
-                       
-                       response <- private$REST$http$exec("PUT", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       group <- c("group_class" = "project", group)
+                       self$groups.create(group, ensure_unique_name)
                },
 
-               containers.delete = function(uuid)
+               projects.update = function(group, uuid)
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       group <- c("group_class" = "project", group)
+                       self$groups.update(group, uuid)
                },
 
-               containers.auth = function(uuid)
+               projects.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact",
+                       include_trash = NULL)
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}/auth")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       filters[[length(filters) + 1]] <- list("group_class", "=", "project")
+                       self$groups.list(filters, where, order, select, distinct,
+                                        limit, offset, count, include_trash)
+               },
+
+               projects.delete = function(uuid)
+               {
+                       self$groups.delete(uuid)
                },
 
-               containers.lock = function(uuid)
+               users.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}/lock")
+                       endPoint <- stringr::str_interp("users/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       resource
                },
 
-               containers.unlock = function(uuid)
+               users.create = function(user, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}/unlock")
+                       endPoint <- stringr::str_interp("users")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
+                       
+                       if(length(user) > 0)
+                               body <- jsonlite::toJSON(list(user = user), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -4417,88 +1698,61 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       resource
                },
 
-               containers.current = function()
+               users.update = function(user, uuid)
                {
-                       endPoint <- stringr::str_interp("containers/current")
+                       endPoint <- stringr::str_interp("users/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(user) > 0)
+                               body <- jsonlite::toJSON(list(user = user), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       resource
                },
 
-               containers.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               users.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("containers")
+                       endPoint <- stringr::str_interp("users/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               containers.show = function(uuid)
+               users.current = function()
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}")
+                       endPoint <- stringr::str_interp("users/current")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4508,61 +1762,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
+                       resource
                },
 
-               containers.destroy = function(uuid)
+               users.system = function()
                {
-                       endPoint <- stringr::str_interp("containers/${uuid}")
+                       endPoint <- stringr::str_interp("users/system")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
+                       queryArgs <- NULL
                        
-                       Container$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               state = resource$state, started_at = resource$started_at,
-                               finished_at = resource$finished_at, log = resource$log,
-                               environment = resource$environment, cwd = resource$cwd,
-                               command = resource$command, output_path = resource$output_path,
-                               mounts = resource$mounts, runtime_constraints = resource$runtime_constraints,
-                               output = resource$output, container_image = resource$container_image,
-                               progress = resource$progress, priority = resource$priority,
-                               updated_at = resource$updated_at, exit_code = resource$exit_code,
-                               auth_uuid = resource$auth_uuid, locked_by_uuid = resource$locked_by_uuid,
-                               scheduling_parameters = resource$scheduling_parameters)
-               },
-
-               humans.get = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("humans/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4572,47 +1782,41 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, properties = resource$properties,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               humans.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               users.activate = function(uuid)
                {
-                       endPoint <- stringr::str_interp("humans")
+                       endPoint <- stringr::str_interp("users/${uuid}/activate")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       HumanList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               humans.create = function(human, ensure_unique_name = "false")
+               users.setup = function(user = NULL, openid_prefix = NULL,
+                       repo_name = NULL, vm_uuid = NULL, send_notification_email = "false")
                {
-                       endPoint <- stringr::str_interp("humans")
+                       endPoint <- stringr::str_interp("users/setup")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- human$toJSON()
+                       queryArgs <- list(user = user, openid_prefix = openid_prefix,
+                                                         repo_name = repo_name, vm_uuid = vm_uuid,
+                                                         send_notification_email = send_notification_email)
+                       
+                       body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -4621,70 +1825,61 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, properties = resource$properties,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               humans.update = function(human, uuid)
+               users.unsetup = function(uuid)
                {
-                       endPoint <- stringr::str_interp("humans/${uuid}")
+                       endPoint <- stringr::str_interp("users/${uuid}/unsetup")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- human$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, properties = resource$properties,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               humans.delete = function(uuid)
+               users.update_uuid = function(uuid, new_uuid)
                {
-                       endPoint <- stringr::str_interp("humans/${uuid}")
+                       endPoint <- stringr::str_interp("users/${uuid}/update_uuid")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(new_uuid = new_uuid)
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, properties = resource$properties,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               humans.list = function(filters = NULL, where = NULL,
+               users.list = function(filters = NULL, where = NULL,
                        order = NULL, select = NULL, distinct = NULL,
                        limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("humans")
+                       endPoint <- stringr::str_interp("users")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4694,19 +1889,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       HumanList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               humans.show = function(uuid)
+               api_client_authorizations.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("humans/${uuid}")
+                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4716,99 +1909,88 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, properties = resource$properties,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               humans.destroy = function(uuid)
+               api_client_authorizations.create = function(apiclientauthorization,
+                       ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("humans/${uuid}")
+                       endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       if(length(apiclientauthorization) > 0)
+                               body <- jsonlite::toJSON(list(apiclientauthorization = apiclientauthorization), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, properties = resource$properties,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               job_tasks.get = function(uuid)
+               api_client_authorizations.update = function(apiclientauthorization, uuid)
                {
-                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
+                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(apiclientauthorization) > 0)
+                               body <- jsonlite::toJSON(list(apiclientauthorization = apiclientauthorization), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, job_uuid = resource$job_uuid,
-                               sequence = resource$sequence, parameters = resource$parameters,
-                               output = resource$output, progress = resource$progress,
-                               success = resource$success, created_at = resource$created_at,
-                               updated_at = resource$updated_at, created_by_job_task_uuid = resource$created_by_job_task_uuid,
-                               qsequence = resource$qsequence, started_at = resource$started_at,
-                               finished_at = resource$finished_at)
+                       resource
                },
 
-               job_tasks.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               api_client_authorizations.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("job_tasks")
+                       endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTaskList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               job_tasks.create = function(job_task, ensure_unique_name = "false")
+               api_client_authorizations.create_system_auth = function(api_client_id = NULL, scopes = NULL)
                {
-                       endPoint <- stringr::str_interp("job_tasks")
+                       endPoint <- stringr::str_interp("api_client_authorizations/create_system_auth")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- job_task$toJSON()
+                       queryArgs <- list(api_client_id = api_client_id,
+                                                         scopes = scopes)
+                       
+                       body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -4817,86 +1999,62 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, job_uuid = resource$job_uuid,
-                               sequence = resource$sequence, parameters = resource$parameters,
-                               output = resource$output, progress = resource$progress,
-                               success = resource$success, created_at = resource$created_at,
-                               updated_at = resource$updated_at, created_by_job_task_uuid = resource$created_by_job_task_uuid,
-                               qsequence = resource$qsequence, started_at = resource$started_at,
-                               finished_at = resource$finished_at)
+                       resource
                },
 
-               job_tasks.update = function(job_task, uuid)
+               api_client_authorizations.current = function()
                {
-                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
+                       endPoint <- stringr::str_interp("api_client_authorizations/current")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- job_task$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, job_uuid = resource$job_uuid,
-                               sequence = resource$sequence, parameters = resource$parameters,
-                               output = resource$output, progress = resource$progress,
-                               success = resource$success, created_at = resource$created_at,
-                               updated_at = resource$updated_at, created_by_job_task_uuid = resource$created_by_job_task_uuid,
-                               qsequence = resource$qsequence, started_at = resource$started_at,
-                               finished_at = resource$finished_at)
+                       resource
                },
 
-               job_tasks.delete = function(uuid)
+               api_client_authorizations.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
+                       endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, job_uuid = resource$job_uuid,
-                               sequence = resource$sequence, parameters = resource$parameters,
-                               output = resource$output, progress = resource$progress,
-                               success = resource$success, created_at = resource$created_at,
-                               updated_at = resource$updated_at, created_by_job_task_uuid = resource$created_by_job_task_uuid,
-                               qsequence = resource$qsequence, started_at = resource$started_at,
-                               finished_at = resource$finished_at)
+                       resource
                },
 
-               job_tasks.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               containers.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("job_tasks")
+                       endPoint <- stringr::str_interp("containers/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4906,105 +2064,85 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTaskList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               job_tasks.show = function(uuid)
+               containers.create = function(container, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
+                       endPoint <- stringr::str_interp("containers")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(container) > 0)
+                               body <- jsonlite::toJSON(list(container = container), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, job_uuid = resource$job_uuid,
-                               sequence = resource$sequence, parameters = resource$parameters,
-                               output = resource$output, progress = resource$progress,
-                               success = resource$success, created_at = resource$created_at,
-                               updated_at = resource$updated_at, created_by_job_task_uuid = resource$created_by_job_task_uuid,
-                               qsequence = resource$qsequence, started_at = resource$started_at,
-                               finished_at = resource$finished_at)
+                       resource
                },
 
-               job_tasks.destroy = function(uuid)
+               containers.update = function(container, uuid)
                {
-                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
+                       endPoint <- stringr::str_interp("containers/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       if(length(container) > 0)
+                               body <- jsonlite::toJSON(list(container = container), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, job_uuid = resource$job_uuid,
-                               sequence = resource$sequence, parameters = resource$parameters,
-                               output = resource$output, progress = resource$progress,
-                               success = resource$success, created_at = resource$created_at,
-                               updated_at = resource$updated_at, created_by_job_task_uuid = resource$created_by_job_task_uuid,
-                               qsequence = resource$qsequence, started_at = resource$started_at,
-                               finished_at = resource$finished_at)
+                       resource
                },
 
-               links.get = function(uuid)
+               containers.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("links/${uuid}")
+                       endPoint <- stringr::str_interp("containers/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               links.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               containers.auth = function(uuid)
                {
-                       endPoint <- stringr::str_interp("links")
+                       endPoint <- stringr::str_interp("containers/${uuid}/auth")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5014,20 +2152,18 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LinkList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               links.create = function(link, ensure_unique_name = "false")
+               containers.lock = function(uuid)
                {
-                       endPoint <- stringr::str_interp("links")
+                       endPoint <- stringr::str_interp("containers/${uuid}/lock")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- link$toJSON()
+                       queryArgs <- NULL
+                       
+                       body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -5036,79 +2172,57 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               links.update = function(link, uuid)
+               containers.unlock = function(uuid)
                {
-                       endPoint <- stringr::str_interp("links/${uuid}")
+                       endPoint <- stringr::str_interp("containers/${uuid}/unlock")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- link$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               links.delete = function(uuid)
+               containers.secret_mounts = function(uuid)
                {
-                       endPoint <- stringr::str_interp("links/${uuid}")
+                       endPoint <- stringr::str_interp("containers/${uuid}/secret_mounts")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               links.list = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               containers.current = function()
                {
-                       endPoint <- stringr::str_interp("links")
+                       endPoint <- stringr::str_interp("containers/current")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5118,19 +2232,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LinkList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               links.show = function(uuid)
+               containers.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("links/${uuid}")
+                       endPoint <- stringr::str_interp("containers")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5140,487 +2257,313 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               links.destroy = function(uuid)
+               api_clients.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("links/${uuid}")
+                       endPoint <- stringr::str_interp("api_clients/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               links.get_permissions = function(uuid)
+               api_clients.create = function(apiclient, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("permissions/${uuid}")
+                       endPoint <- stringr::str_interp("api_clients")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(apiclient) > 0)
+                               body <- jsonlite::toJSON(list(apiclient = apiclient), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, tail_uuid = resource$tail_uuid,
-                               link_class = resource$link_class, name = resource$name,
-                               head_uuid = resource$head_uuid, properties = resource$properties,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               jobs.get = function(uuid)
+               api_clients.update = function(apiclient, uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}")
+                       endPoint <- stringr::str_interp("api_clients/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(apiclient) > 0)
+                               body <- jsonlite::toJSON(list(apiclient = apiclient), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               api_clients.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("jobs")
+                       endPoint <- stringr::str_interp("api_clients/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               jobs.create = function(job, ensure_unique_name = "false",
-                       find_or_create = "false", filters = NULL,
-                       minimum_script_version = NULL, exclude_script_versions = NULL)
+               api_clients.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("jobs")
+                       endPoint <- stringr::str_interp("api_clients")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name,
-                               find_or_create = find_or_create, filters = filters,
-                               minimum_script_version = minimum_script_version,
-                               exclude_script_versions = exclude_script_versions)
-                       body <- job$toJSON()
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.update = function(job, uuid)
+               authorized_keys.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}")
+                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- job$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.delete = function(uuid)
+               authorized_keys.create = function(authorizedkey,
+                       ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}")
+                       endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       if(length(authorizedkey) > 0)
+                               body <- jsonlite::toJSON(list(authorizedkey = authorizedkey), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.queue = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               authorized_keys.update = function(authorizedkey, uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/queue")
+                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(authorizedkey) > 0)
+                               body <- jsonlite::toJSON(list(authorizedkey = authorizedkey), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.queue_size = function()
+               authorized_keys.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/queue_size")
+                       endPoint <- stringr::str_interp("authorized_keys/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.cancel = function(uuid)
+               authorized_keys.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}/cancel")
+                       endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.lock = function(uuid)
+               container_requests.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}/lock")
+                       endPoint <- stringr::str_interp("container_requests/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.list = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               container_requests.create = function(containerrequest,
+                       ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("jobs")
+                       endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(containerrequest) > 0)
+                               body <- jsonlite::toJSON(list(containerrequest = containerrequest), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               jobs.show = function(uuid)
+               container_requests.update = function(containerrequest, uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}")
+                       endPoint <- stringr::str_interp("container_requests/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(containerrequest) > 0)
+                               body <- jsonlite::toJSON(list(containerrequest = containerrequest), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               jobs.destroy = function(uuid)
+               container_requests.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("jobs/${uuid}")
+                       endPoint <- stringr::str_interp("container_requests/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -5630,36 +2573,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, submit_id = resource$submit_id,
-                               script = resource$script, script_version = resource$script_version,
-                               script_parameters = resource$script_parameters,
-                               cancelled_by_client_uuid = resource$cancelled_by_client_uuid,
-                               cancelled_by_user_uuid = resource$cancelled_by_user_uuid,
-                               cancelled_at = resource$cancelled_at, started_at = resource$started_at,
-                               finished_at = resource$finished_at, running = resource$running,
-                               success = resource$success, output = resource$output,
-                               created_at = resource$created_at, updated_at = resource$updated_at,
-                               is_locked_by_uuid = resource$is_locked_by_uuid,
-                               log = resource$log, tasks_summary = resource$tasks_summary,
-                               runtime_constraints = resource$runtime_constraints,
-                               nondeterministic = resource$nondeterministic,
-                               repository = resource$repository, supplied_script_version = resource$supplied_script_version,
-                               docker_image_locator = resource$docker_image_locator,
-                               priority = resource$priority, description = resource$description,
-                               state = resource$state, arvados_sdk_version = resource$arvados_sdk_version,
-                               components = resource$components, script_parameters_digest = resource$script_parameters_digest)
+                       resource
                },
 
-               keep_disks.get = function(uuid)
+               container_requests.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
+                       endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5669,30 +2598,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_disks.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               collections.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks")
+                       endPoint <- stringr::str_interp("collections/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5702,20 +2618,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDiskList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               keep_disks.create = function(keep_disk, ensure_unique_name = "false")
+               collections.create = function(collection, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("keep_disks")
+                       endPoint <- stringr::str_interp("collections")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- keep_disk$toJSON()
+                       
+                       if(length(collection) > 0)
+                               body <- jsonlite::toJSON(list(collection = collection), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -5724,26 +2642,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_disks.update = function(keep_disk, uuid)
+               collections.update = function(collection, uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
+                       endPoint <- stringr::str_interp("collections/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- keep_disk$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(collection) > 0)
+                               body <- jsonlite::toJSON(list(collection = collection), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -5752,25 +2666,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_disks.delete = function(uuid)
+               collections.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
+                       endPoint <- stringr::str_interp("collections/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -5780,63 +2686,37 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_disks.ping = function(uuid = NULL, ping_secret,
-                       node_uuid = NULL, filesystem_uuid = NULL,
-                       service_host = NULL, service_port, service_ssl_flag)
+               collections.provenance = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks/ping")
+                       endPoint <- stringr::str_interp("collections/${uuid}/provenance")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid, ping_secret = ping_secret,
-                               node_uuid = node_uuid, filesystem_uuid = filesystem_uuid,
-                               service_host = service_host, service_port = service_port,
-                               service_ssl_flag = service_ssl_flag)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_disks.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               collections.used_by = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks")
+                       endPoint <- stringr::str_interp("collections/${uuid}/used_by")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5846,75 +2726,63 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDiskList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               keep_disks.show = function(uuid)
+               collections.trash = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
+                       endPoint <- stringr::str_interp("collections/${uuid}/trash")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_disks.destroy = function(uuid)
+               collections.untrash = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
+                       endPoint <- stringr::str_interp("collections/${uuid}/untrash")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, ping_secret = resource$ping_secret,
-                               node_uuid = resource$node_uuid, filesystem_uuid = resource$filesystem_uuid,
-                               bytes_total = resource$bytes_total, bytes_free = resource$bytes_free,
-                               is_readable = resource$is_readable, is_writable = resource$is_writable,
-                               last_read_at = resource$last_read_at, last_write_at = resource$last_write_at,
-                               last_ping_at = resource$last_ping_at, created_at = resource$created_at,
-                               updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
+                       resource
                },
 
-               keep_services.get = function(uuid)
+               collections.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact", include_trash = NULL)
                {
-                       endPoint <- stringr::str_interp("keep_services/${uuid}")
+                       endPoint <- stringr::str_interp("collections")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count,
+                                                         include_trash = include_trash)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5924,27 +2792,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               keep_services.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               humans.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_services")
+                       endPoint <- stringr::str_interp("humans/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5954,21 +2812,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepServiceList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               keep_services.create = function(keep_service,
-                       ensure_unique_name = "false")
+               humans.create = function(human, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("keep_services")
+                       endPoint <- stringr::str_interp("humans")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- keep_service$toJSON()
+                       
+                       if(length(human) > 0)
+                               body <- jsonlite::toJSON(list(human = human), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -5977,23 +2836,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               keep_services.update = function(keep_service, uuid)
+               humans.update = function(human, uuid)
                {
-                       endPoint <- stringr::str_interp("keep_services/${uuid}")
+                       endPoint <- stringr::str_interp("humans/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- keep_service$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(human) > 0)
+                               body <- jsonlite::toJSON(list(human = human), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -6002,22 +2860,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               keep_services.delete = function(uuid)
+               humans.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_services/${uuid}")
+                       endPoint <- stringr::str_interp("humans/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -6027,22 +2880,21 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               keep_services.accessible = function()
+               humans.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("keep_services/accessible")
+                       endPoint <- stringr::str_interp("humans")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- NULL
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6052,27 +2904,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               keep_services.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               job_tasks.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_services")
+                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6082,44 +2924,65 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepServiceList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               keep_services.show = function(uuid)
+               job_tasks.create = function(jobtask, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("keep_services/${uuid}")
+                       endPoint <- stringr::str_interp("job_tasks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
+                       
+                       if(length(jobtask) > 0)
+                               body <- jsonlite::toJSON(list(jobtask = jobtask), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
+                                                          queryArgs, private$numRetries)
+                       resource <- private$REST$httpParser$parseJSONResponse(response)
+                       
+                       if(!is.null(resource$errors))
+                               stop(resource$errors)
+                       
+                       resource
+               },
+
+               job_tasks.update = function(jobtask, uuid)
+               {
+                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
+                       url <- paste0(private$host, endPoint)
+                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                                       "Content-Type" = "application/json")
+                       queryArgs <- NULL
+                       
+                       if(length(jobtask) > 0)
+                               body <- jsonlite::toJSON(list(jobtask = jobtask), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               keep_services.destroy = function(uuid)
+               job_tasks.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("keep_services/${uuid}")
+                       endPoint <- stringr::str_interp("job_tasks/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -6129,22 +2992,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, service_host = resource$service_host,
-                               service_port = resource$service_port, service_ssl_flag = resource$service_ssl_flag,
-                               service_type = resource$service_type, created_at = resource$created_at,
-                               updated_at = resource$updated_at, read_only = resource$read_only)
+                       resource
                },
 
-               pipeline_templates.get = function(uuid)
+               job_tasks.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
+                       endPoint <- stringr::str_interp("job_tasks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6154,27 +3017,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               components = resource$components, updated_at = resource$updated_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_templates.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               links.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_templates")
+                       endPoint <- stringr::str_interp("links/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6184,21 +3037,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplateList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               pipeline_templates.create = function(pipeline_template,
-                       ensure_unique_name = "false")
+               links.create = function(link, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("pipeline_templates")
+                       endPoint <- stringr::str_interp("links")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- pipeline_template$toJSON()
+                       
+                       if(length(link) > 0)
+                               body <- jsonlite::toJSON(list(link = link), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -6207,23 +3061,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               components = resource$components, updated_at = resource$updated_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_templates.update = function(pipeline_template, uuid)
+               links.update = function(link, uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
+                       endPoint <- stringr::str_interp("links/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- pipeline_template$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(link) > 0)
+                               body <- jsonlite::toJSON(list(link = link), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -6232,22 +3085,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               components = resource$components, updated_at = resource$updated_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_templates.delete = function(uuid)
+               links.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
+                       endPoint <- stringr::str_interp("links/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -6257,27 +3105,21 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               components = resource$components, updated_at = resource$updated_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_templates.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               links.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("pipeline_templates")
+                       endPoint <- stringr::str_interp("links")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6287,19 +3129,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplateList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               pipeline_templates.show = function(uuid)
+               links.get_permissions = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
+                       endPoint <- stringr::str_interp("permissions/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6309,187 +3149,154 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               components = resource$components, updated_at = resource$updated_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_templates.destroy = function(uuid)
+               jobs.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
+                       endPoint <- stringr::str_interp("jobs/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               components = resource$components, updated_at = resource$updated_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.get = function(uuid)
+               jobs.create = function(job, ensure_unique_name = "false",
+                       find_or_create = "false", filters = NULL,
+                       minimum_script_version = NULL, exclude_script_versions = NULL)
                {
-                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
+                       endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name,
+                                                         find_or_create = find_or_create, filters = filters,
+                                                         minimum_script_version = minimum_script_version,
+                                                         exclude_script_versions = exclude_script_versions)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(job) > 0)
+                               body <- jsonlite::toJSON(list(job = job), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               jobs.update = function(job, uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_instances")
+                       endPoint <- stringr::str_interp("jobs/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(job) > 0)
+                               body <- jsonlite::toJSON(list(job = job), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstanceList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               pipeline_instances.create = function(pipeline_instance,
-                       ensure_unique_name = "false")
+               jobs.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_instances")
+                       endPoint <- stringr::str_interp("jobs/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- pipeline_instance$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.update = function(pipeline_instance, uuid)
+               jobs.queue = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
+                       endPoint <- stringr::str_interp("jobs/queue")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- pipeline_instance$toJSON()
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.delete = function(uuid)
+               jobs.queue_size = function()
                {
-                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
+                       endPoint <- stringr::str_interp("jobs/queue_size")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.cancel = function(uuid)
+               jobs.cancel = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}/cancel")
+                       endPoint <- stringr::str_interp("jobs/${uuid}/cancel")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -6499,52 +3306,41 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               jobs.lock = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_instances")
+                       endPoint <- stringr::str_interp("jobs/${uuid}/lock")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstanceList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               pipeline_instances.show = function(uuid)
+               jobs.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
+                       endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6554,275 +3350,224 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               pipeline_instances.destroy = function(uuid)
+               keep_disks.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
+                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
-                               name = resource$name, components = resource$components,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               state = resource$state, components_summary = resource$components_summary,
-                               started_at = resource$started_at, finished_at = resource$finished_at,
-                               description = resource$description)
+                       resource
                },
 
-               nodes.get = function(uuid)
+               keep_disks.create = function(keepdisk, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("nodes/${uuid}")
+                       endPoint <- stringr::str_interp("keep_disks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(keepdisk) > 0)
+                               body <- jsonlite::toJSON(list(keepdisk = keepdisk), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               nodes.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               keep_disks.update = function(keepdisk, uuid)
                {
-                       endPoint <- stringr::str_interp("nodes")
+                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(keepdisk) > 0)
+                               body <- jsonlite::toJSON(list(keepdisk = keepdisk), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       NodeList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               nodes.create = function(node, ensure_unique_name = "false",
-                       assign_slot = NULL)
+               keep_disks.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("nodes")
+                       endPoint <- stringr::str_interp("keep_disks/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name,
-                               assign_slot = assign_slot)
-                       body <- node$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               nodes.update = function(node, uuid, assign_slot = NULL)
+               keep_disks.ping = function(uuid = NULL, ping_secret,
+                       node_uuid = NULL, filesystem_uuid = NULL,
+                       service_host = NULL, service_port, service_ssl_flag)
                {
-                       endPoint <- stringr::str_interp("nodes/${uuid}")
+                       endPoint <- stringr::str_interp("keep_disks/ping")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid, assign_slot = assign_slot)
-                       body <- node$toJSON()
+                       queryArgs <- list(uuid = uuid, ping_secret = ping_secret,
+                                                         node_uuid = node_uuid, filesystem_uuid = filesystem_uuid,
+                                                         service_host = service_host, service_port = service_port,
+                                                         service_ssl_flag = service_ssl_flag)
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               nodes.delete = function(uuid)
+               keep_disks.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("nodes/${uuid}")
+                       endPoint <- stringr::str_interp("keep_disks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               nodes.ping = function(uuid, ping_secret)
+               keep_services.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("nodes/${uuid}/ping")
+                       endPoint <- stringr::str_interp("keep_services/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid, ping_secret = ping_secret)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               nodes.list = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               keep_services.create = function(keepservice,
+                       ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("nodes")
+                       endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(keepservice) > 0)
+                               body <- jsonlite::toJSON(list(keepservice = keepservice), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       NodeList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               nodes.show = function(uuid)
+               keep_services.update = function(keepservice, uuid)
                {
-                       endPoint <- stringr::str_interp("nodes/${uuid}")
+                       endPoint <- stringr::str_interp("keep_services/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(keepservice) > 0)
+                               body <- jsonlite::toJSON(list(keepservice = keepservice), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               nodes.destroy = function(uuid)
+               keep_services.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("nodes/${uuid}")
+                       endPoint <- stringr::str_interp("keep_services/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -6832,25 +3577,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, slot_number = resource$slot_number,
-                               hostname = resource$hostname, domain = resource$domain,
-                               ip_address = resource$ip_address, first_ping_at = resource$first_ping_at,
-                               last_ping_at = resource$last_ping_at, info = resource$info,
-                               updated_at = resource$updated_at, properties = resource$properties,
-                               job_uuid = resource$job_uuid)
+                       resource
                },
 
-               repositories.get = function(uuid)
+               keep_services.accessible = function()
                {
-                       endPoint <- stringr::str_interp("repositories/${uuid}")
+                       endPoint <- stringr::str_interp("keep_services/accessible")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6860,25 +3597,42 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               repositories.index = function(filters = NULL,
+               keep_services.list = function(filters = NULL,
                        where = NULL, order = NULL, select = NULL,
                        distinct = NULL, limit = "100", offset = "0",
                        count = "exact")
                {
-                       endPoint <- stringr::str_interp("repositories")
+                       endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
+                                                          queryArgs, private$numRetries)
+                       resource <- private$REST$httpParser$parseJSONResponse(response)
+                       
+                       if(!is.null(resource$errors))
+                               stop(resource$errors)
+                       
+                       resource
+               },
+
+               pipeline_templates.get = function(uuid)
+               {
+                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
+                       url <- paste0(private$host, endPoint)
+                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                                       "Content-Type" = "application/json")
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6888,20 +3642,23 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       RepositoryList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               repositories.create = function(repository, ensure_unique_name = "false")
+               pipeline_templates.create = function(pipelinetemplate,
+                       ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("repositories")
+                       endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- repository$toJSON()
+                       
+                       if(length(pipelinetemplate) > 0)
+                               body <- jsonlite::toJSON(list(pipelinetemplate = pipelinetemplate), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -6910,21 +3667,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               repositories.update = function(repository, uuid)
+               pipeline_templates.update = function(pipelinetemplate, uuid)
                {
-                       endPoint <- stringr::str_interp("repositories/${uuid}")
+                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- repository$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(pipelinetemplate) > 0)
+                               body <- jsonlite::toJSON(list(pipelinetemplate = pipelinetemplate), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -6933,20 +3691,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               repositories.delete = function(uuid)
+               pipeline_templates.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("repositories/${uuid}")
+                       endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -6956,20 +3711,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               repositories.get_all_permissions = function()
+               pipeline_templates.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("repositories/get_all_permissions")
+                       endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- NULL
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6979,25 +3736,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               repositories.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               pipeline_instances.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("repositories")
+                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7007,263 +3756,245 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       RepositoryList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               repositories.show = function(uuid)
+               pipeline_instances.create = function(pipelineinstance,
+                       ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("repositories/${uuid}")
+                       endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(pipelineinstance) > 0)
+                               body <- jsonlite::toJSON(list(pipelineinstance = pipelineinstance), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               repositories.destroy = function(uuid)
+               pipeline_instances.update = function(pipelineinstance, uuid)
                {
-                       endPoint <- stringr::str_interp("repositories/${uuid}")
+                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       if(length(pipelineinstance) > 0)
+                               body <- jsonlite::toJSON(list(pipelineinstance = pipelineinstance), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               specimens.get = function(uuid)
+               pipeline_instances.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("specimens/${uuid}")
+                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, material = resource$material,
-                               updated_at = resource$updated_at, properties = resource$properties)
+                       resource
                },
 
-               specimens.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               pipeline_instances.cancel = function(uuid)
                {
-                       endPoint <- stringr::str_interp("specimens")
+                       endPoint <- stringr::str_interp("pipeline_instances/${uuid}/cancel")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       SpecimenList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               specimens.create = function(specimen, ensure_unique_name = "false")
+               pipeline_instances.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("specimens")
+                       endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- specimen$toJSON()
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, material = resource$material,
-                               updated_at = resource$updated_at, properties = resource$properties)
+                       resource
                },
 
-               specimens.update = function(specimen, uuid)
+               nodes.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("specimens/${uuid}")
+                       endPoint <- stringr::str_interp("nodes/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- specimen$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, material = resource$material,
-                               updated_at = resource$updated_at, properties = resource$properties)
+                       resource
                },
 
-               specimens.delete = function(uuid)
+               nodes.create = function(node, ensure_unique_name = "false",
+                       assign_slot = NULL)
                {
-                       endPoint <- stringr::str_interp("specimens/${uuid}")
+                       endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name,
+                                                         assign_slot = assign_slot)
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       if(length(node) > 0)
+                               body <- jsonlite::toJSON(list(node = node), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, material = resource$material,
-                               updated_at = resource$updated_at, properties = resource$properties)
+                       resource
                },
 
-               specimens.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               nodes.update = function(node, uuid, assign_slot = NULL)
                {
-                       endPoint <- stringr::str_interp("specimens")
+                       endPoint <- stringr::str_interp("nodes/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- list(assign_slot = assign_slot)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(node) > 0)
+                               body <- jsonlite::toJSON(list(node = node), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       SpecimenList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               specimens.show = function(uuid)
+               nodes.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("specimens/${uuid}")
+                       endPoint <- stringr::str_interp("nodes/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, material = resource$material,
-                               updated_at = resource$updated_at, properties = resource$properties)
+                       resource
                },
 
-               specimens.destroy = function(uuid)
+               nodes.ping = function(uuid, ping_secret)
                {
-                       endPoint <- stringr::str_interp("specimens/${uuid}")
+                       endPoint <- stringr::str_interp("nodes/${uuid}/ping")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(ping_secret = ping_secret)
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, material = resource$material,
-                               updated_at = resource$updated_at, properties = resource$properties)
+                       resource
                },
 
-               logs.get = function(uuid)
+               nodes.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("logs/${uuid}")
+                       endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7273,27 +4004,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               object_uuid = resource$object_uuid, event_at = resource$event_at,
-                               event_type = resource$event_type, summary = resource$summary,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at, modified_at = resource$modified_at,
-                               object_owner_uuid = resource$object_owner_uuid)
+                       resource
                },
 
-               logs.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               repositories.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("logs")
+                       endPoint <- stringr::str_interp("repositories/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7303,20 +4024,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LogList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               logs.create = function(log, ensure_unique_name = "false")
+               repositories.create = function(repository, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("logs")
+                       endPoint <- stringr::str_interp("repositories")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- log$toJSON()
+                       
+                       if(length(repository) > 0)
+                               body <- jsonlite::toJSON(list(repository = repository), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -7325,24 +4048,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               object_uuid = resource$object_uuid, event_at = resource$event_at,
-                               event_type = resource$event_type, summary = resource$summary,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at, modified_at = resource$modified_at,
-                               object_owner_uuid = resource$object_owner_uuid)
+                       resource
                },
 
-               logs.update = function(log, uuid)
+               repositories.update = function(repository, uuid)
                {
-                       endPoint <- stringr::str_interp("logs/${uuid}")
+                       endPoint <- stringr::str_interp("repositories/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- log$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(repository) > 0)
+                               body <- jsonlite::toJSON(list(repository = repository), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -7351,23 +4072,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               object_uuid = resource$object_uuid, event_at = resource$event_at,
-                               event_type = resource$event_type, summary = resource$summary,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at, modified_at = resource$modified_at,
-                               object_owner_uuid = resource$object_owner_uuid)
+                       resource
                },
 
-               logs.delete = function(uuid)
+               repositories.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("logs/${uuid}")
+                       endPoint <- stringr::str_interp("repositories/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -7377,27 +4092,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               object_uuid = resource$object_uuid, event_at = resource$event_at,
-                               event_type = resource$event_type, summary = resource$summary,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at, modified_at = resource$modified_at,
-                               object_owner_uuid = resource$object_owner_uuid)
+                       resource
                },
 
-               logs.list = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               repositories.get_all_permissions = function()
                {
-                       endPoint <- stringr::str_interp("logs")
+                       endPoint <- stringr::str_interp("repositories/get_all_permissions")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7407,19 +4112,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LogList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               logs.show = function(uuid)
+               repositories.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("logs/${uuid}")
+                       endPoint <- stringr::str_interp("repositories")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7429,221 +4137,198 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               object_uuid = resource$object_uuid, event_at = resource$event_at,
-                               event_type = resource$event_type, summary = resource$summary,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at, modified_at = resource$modified_at,
-                               object_owner_uuid = resource$object_owner_uuid)
+                       resource
                },
 
-               logs.destroy = function(uuid)
+               specimens.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("logs/${uuid}")
+                       endPoint <- stringr::str_interp("specimens/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               object_uuid = resource$object_uuid, event_at = resource$event_at,
-                               event_type = resource$event_type, summary = resource$summary,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at, modified_at = resource$modified_at,
-                               object_owner_uuid = resource$object_owner_uuid)
+                       resource
                },
 
-               traits.get = function(uuid)
+               specimens.create = function(specimen, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("traits/${uuid}")
+                       endPoint <- stringr::str_interp("specimens")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(specimen) > 0)
+                               body <- jsonlite::toJSON(list(specimen = specimen), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               traits.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               specimens.update = function(specimen, uuid)
                {
-                       endPoint <- stringr::str_interp("traits")
+                       endPoint <- stringr::str_interp("specimens/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(specimen) > 0)
+                               body <- jsonlite::toJSON(list(specimen = specimen), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       TraitList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               traits.create = function(trait, ensure_unique_name = "false")
+               specimens.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("traits")
+                       endPoint <- stringr::str_interp("specimens/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- trait$toJSON()
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("POST", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               traits.update = function(trait, uuid)
+               specimens.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("traits/${uuid}")
+                       endPoint <- stringr::str_interp("specimens")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- trait$toJSON()
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       body <- NULL
+                       
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               traits.delete = function(uuid)
+               logs.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("traits/${uuid}")
+                       endPoint <- stringr::str_interp("logs/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               traits.list = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact")
+               logs.create = function(log, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("traits")
+                       endPoint <- stringr::str_interp("logs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(log) > 0)
+                               body <- jsonlite::toJSON(list(log = log), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       TraitList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               traits.show = function(uuid)
+               logs.update = function(log, uuid)
                {
-                       endPoint <- stringr::str_interp("traits/${uuid}")
+                       endPoint <- stringr::str_interp("logs/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(log) > 0)
+                               body <- jsonlite::toJSON(list(log = log), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               traits.destroy = function(uuid)
+               logs.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("traits/${uuid}")
+                       endPoint <- stringr::str_interp("logs/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -7653,21 +4338,21 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               properties = resource$properties, created_at = resource$created_at,
-                               updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.get = function(uuid)
+               logs.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("virtual_machines/${uuid}")
+                       endPoint <- stringr::str_interp("logs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7677,26 +4362,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               traits.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("virtual_machines")
+                       endPoint <- stringr::str_interp("traits/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7706,21 +4382,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachineList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               virtual_machines.create = function(virtual_machine,
-                       ensure_unique_name = "false")
+               traits.create = function(trait, ensure_unique_name = "false")
                {
-                       endPoint <- stringr::str_interp("virtual_machines")
+                       endPoint <- stringr::str_interp("traits")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- virtual_machine$toJSON()
+                       
+                       if(length(trait) > 0)
+                               body <- jsonlite::toJSON(list(trait = trait), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -7729,22 +4406,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.update = function(virtual_machine, uuid)
+               traits.update = function(trait, uuid)
                {
-                       endPoint <- stringr::str_interp("virtual_machines/${uuid}")
+                       endPoint <- stringr::str_interp("traits/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- virtual_machine$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(trait) > 0)
+                               body <- jsonlite::toJSON(list(trait = trait), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -7753,21 +4430,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.delete = function(uuid)
+               traits.delete = function(uuid)
                {
-                       endPoint <- stringr::str_interp("virtual_machines/${uuid}")
+                       endPoint <- stringr::str_interp("traits/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -7777,21 +4450,21 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.logins = function(uuid)
+               traits.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
-                       endPoint <- stringr::str_interp("virtual_machines/${uuid}/logins")
+                       endPoint <- stringr::str_interp("traits")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7801,21 +4474,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.get_all_logins = function()
+               virtual_machines.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("virtual_machines/get_all_logins")
+                       endPoint <- stringr::str_interp("virtual_machines/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7825,72 +4494,66 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               virtual_machines.create = function(virtualmachine,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(virtualmachine) > 0)
+                               body <- jsonlite::toJSON(list(virtualmachine = virtualmachine), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachineList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               virtual_machines.show = function(uuid)
+               virtual_machines.update = function(virtualmachine, uuid)
                {
                        endPoint <- stringr::str_interp("virtual_machines/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(virtualmachine) > 0)
+                               body <- jsonlite::toJSON(list(virtualmachine = virtualmachine), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               virtual_machines.destroy = function(uuid)
+               virtual_machines.delete = function(uuid)
                {
                        endPoint <- stringr::str_interp("virtual_machines/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -7900,21 +4563,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(uuid = resource$uuid,
-                               etag = resource$etag, owner_uuid = resource$owner_uuid,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, hostname = resource$hostname,
-                               created_at = resource$created_at, updated_at = resource$updated_at)
+                       resource
                },
 
-               workflows.get = function(uuid)
+               virtual_machines.logins = function(uuid)
                {
-                       endPoint <- stringr::str_interp("workflows/${uuid}")
+                       endPoint <- stringr::str_interp("virtual_machines/${uuid}/logins")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7924,26 +4583,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               definition = resource$definition, updated_at = resource$updated_at)
+                       resource
                },
 
-               workflows.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               virtual_machines.get_all_logins = function()
                {
-                       endPoint <- stringr::str_interp("workflows")
+                       endPoint <- stringr::str_interp("virtual_machines/get_all_logins")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -7953,142 +4603,110 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       WorkflowList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               workflows.create = function(workflow, ensure_unique_name = "false")
+               virtual_machines.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("workflows")
+                       endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- workflow$toJSON()
-                       
-                       response <- private$REST$http$exec("POST", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
                        
-                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               definition = resource$definition, updated_at = resource$updated_at)
-               },
-
-               workflows.update = function(workflow, uuid)
-               {
-                       endPoint <- stringr::str_interp("workflows/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- workflow$toJSON()
+                       body <- NULL
                        
-                       response <- private$REST$http$exec("PUT", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               definition = resource$definition, updated_at = resource$updated_at)
+                       resource
                },
 
-               workflows.delete = function(uuid)
+               workflows.get = function(uuid)
                {
                        endPoint <- stringr::str_interp("workflows/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
+                       response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               definition = resource$definition, updated_at = resource$updated_at)
+                       resource
                },
 
-               workflows.list = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
+               workflows.create = function(workflow, ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("workflows")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
-                       body <- NULL
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name)
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(workflow) > 0)
+                               body <- jsonlite::toJSON(list(workflow = workflow), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       WorkflowList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               workflows.show = function(uuid)
+               workflows.update = function(workflow, uuid)
                {
                        endPoint <- stringr::str_interp("workflows/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
+                       queryArgs <- NULL
                        
-                       response <- private$REST$http$exec("GET", url, headers, body,
+                       if(length(workflow) > 0)
+                               body <- jsonlite::toJSON(list(workflow = workflow), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
+                       
+                       response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
                        
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               definition = resource$definition, updated_at = resource$updated_at)
+                       resource
                },
 
-               workflows.destroy = function(uuid)
+               workflows.delete = function(uuid)
                {
                        endPoint <- stringr::str_interp("workflows/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -8098,21 +4716,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               name = resource$name, description = resource$description,
-                               definition = resource$definition, updated_at = resource$updated_at)
+                       resource
                },
 
-               groups.get = function(uuid)
+               workflows.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
-                       endPoint <- stringr::str_interp("groups/${uuid}")
+                       endPoint <- stringr::str_interp("workflows")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- list(filters = filters, where = where,
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8122,29 +4741,17 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
-               groups.index = function(filters = NULL, where = NULL,
-                       order = NULL, select = NULL, distinct = NULL,
-                       limit = "100", offset = "0", count = "exact",
-                       include_trash = NULL)
+               groups.get = function(uuid)
                {
-                       endPoint <- stringr::str_interp("groups")
+                       endPoint <- stringr::str_interp("groups/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count,
-                               include_trash = include_trash)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8154,10 +4761,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       GroupList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
                groups.create = function(group, ensure_unique_name = "false")
@@ -8167,7 +4771,12 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- group$toJSON()
+                       
+                       if(length(group) > 0)
+                               body <- jsonlite::toJSON(list(group = group), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -8176,14 +4785,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                groups.update = function(group, uuid)
@@ -8192,8 +4794,13 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- group$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(group) > 0)
+                               body <- jsonlite::toJSON(list(group = group), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -8202,14 +4809,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                groups.delete = function(uuid)
@@ -8218,7 +4818,8 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -8228,14 +4829,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                groups.contents = function(filters = NULL,
@@ -8248,9 +4842,10 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
-                               order = order, distinct = distinct, limit = limit,
-                               offset = offset, count = count, include_trash = include_trash,
-                               uuid = uuid, recursive = recursive)
+                                                         order = order, distinct = distinct, limit = limit,
+                                                         offset = offset, count = count, include_trash = include_trash,
+                                                         uuid = uuid, recursive = recursive)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8260,14 +4855,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                groups.trash = function(uuid)
@@ -8276,7 +4864,8 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -8286,14 +4875,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                groups.untrash = function(uuid)
@@ -8302,7 +4884,8 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -8312,14 +4895,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                groups.list = function(filters = NULL, where = NULL,
@@ -8332,31 +4908,10 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count,
-                               include_trash = include_trash)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count,
+                                                         include_trash = include_trash)
                        
-                       GroupList$new(kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
-               },
-
-               groups.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("groups/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8366,40 +4921,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
-               },
-
-               groups.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("groups/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       Group$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, name = resource$name,
-                               description = resource$description, updated_at = resource$updated_at,
-                               group_class = resource$group_class, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed, delete_at = resource$delete_at)
+                       resource
                },
 
                user_agreements.get = function(uuid)
@@ -8408,43 +4930,8 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
+                       queryArgs <- NULL
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-               },
-
-               user_agreements.index = function(filters = NULL,
-                       where = NULL, order = NULL, select = NULL,
-                       distinct = NULL, limit = "100", offset = "0",
-                       count = "exact")
-               {
-                       endPoint <- stringr::str_interp("user_agreements")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8454,13 +4941,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreementList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
-               user_agreements.create = function(user_agreement,
+               user_agreements.create = function(useragreement,
                        ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("user_agreements")
@@ -8468,7 +4952,12 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       body <- user_agreement$toJSON()
+                       
+                       if(length(useragreement) > 0)
+                               body <- jsonlite::toJSON(list(useragreement = useragreement), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -8477,29 +4966,22 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
+                       resource
                },
 
-               user_agreements.update = function(user_agreement, uuid)
+               user_agreements.update = function(useragreement, uuid)
                {
                        endPoint <- stringr::str_interp("user_agreements/${uuid}")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- user_agreement$toJSON()
+                       queryArgs <- NULL
+                       
+                       if(length(useragreement) > 0)
+                               body <- jsonlite::toJSON(list(useragreement = useragreement), 
+                                                        auto_unbox = TRUE)
+                       else
+                               body <- NULL
                        
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
@@ -8508,19 +4990,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
+                       resource
                },
 
                user_agreements.delete = function(uuid)
@@ -8529,7 +4999,8 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
+                       queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("DELETE", url, headers, body,
@@ -8539,19 +5010,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
+                       resource
                },
 
                user_agreements.signatures = function()
@@ -8561,6 +5020,7 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8570,19 +5030,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
+                       resource
                },
 
                user_agreements.sign = function()
@@ -8592,6 +5040,7 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -8601,19 +5050,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
+                       resource
                },
 
                user_agreements.list = function(filters = NULL,
@@ -8626,8 +5063,9 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
-                               order = order, select = select, distinct = distinct,
-                               limit = limit, offset = offset, count = count)
+                                                         order = order, select = select, distinct = distinct,
+                                                         limit = limit, offset = offset, count = count)
+                       
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8637,10 +5075,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreementList$new(kind = resource$kind,
-                               etag = resource$etag, items = resource$items,
-                               next_link = resource$next_link, next_page_token = resource$next_page_token,
-                               selfLink = resource$selfLink)
+                       resource
                },
 
                user_agreements.new = function()
@@ -8650,37 +5085,7 @@ Arvados <- R6::R6Class(
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("GET", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-               },
-
-               user_agreements.show = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("user_agreements/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -8690,55 +5095,13 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
-               },
-
-               user_agreements.destroy = function(uuid)
-               {
-                       endPoint <- stringr::str_interp("user_agreements/${uuid}")
-                       url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
-                                       "Content-Type" = "application/json")
-                       queryArgs <- list(uuid = uuid)
-                       body <- NULL
-                       
-                       response <- private$REST$http$exec("DELETE", url, headers, body,
-                                                          queryArgs, private$numRetries)
-                       resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
-                       if(!is.null(resource$errors))
-                               stop(resource$errors)
-                       
-                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
-                               modified_by_user_uuid = resource$modified_by_user_uuid,
-                               modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
-                               replication_desired = resource$replication_desired,
-                               replication_confirmed_at = resource$replication_confirmed_at,
-                               replication_confirmed = resource$replication_confirmed,
-                               updated_at = resource$updated_at, manifest_text = resource$manifest_text,
-                               name = resource$name, description = resource$description,
-                               properties = resource$properties, delete_at = resource$delete_at,
-                               file_names = resource$file_names, trash_at = resource$trash_at,
-                               is_trashed = resource$is_trashed)
+                       resource
                },
 
                getHostName = function() private$host,
                getToken = function() private$token,
-               setRESTService = function(newREST) private$REST <- newREST
+               setRESTService = function(newREST) private$REST <- newREST,
+               getRESTService = function() private$REST
        ),
 
        private = list(