14198: Bringing unit tests up to date WIP
[arvados.git] / sdk / cwl / tests / test_make_output.py
index 153de7bbe20f5b68151fa94c63f4c523b5714d32..baeb4145ee6dbc5ba4db326f88acd54ce04352f4 100644 (file)
@@ -1,3 +1,7 @@
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: Apache-2.0
+
 import functools
 import json
 import logging
@@ -8,6 +12,7 @@ import unittest
 
 import arvados
 import arvados_cwl
+import arvados_cwl.executor
 from .mock_discovery import get_rootDesc
 
 class TestMakeOutput(unittest.TestCase):
@@ -19,7 +24,7 @@ class TestMakeOutput(unittest.TestCase):
     @mock.patch("arvados.collection.CollectionReader")
     def test_make_output_collection(self, reader, col):
         keep_client = mock.MagicMock()
-        runner = arvados_cwl.ArvCwlRunner(self.api, keep_client=keep_client)
+        runner = arvados_cwl.executor.ArvCwlExecutor(self.api, keep_client=keep_client)
         runner.project_uuid = 'zzzzz-j7d0g-zzzzzzzzzzzzzzz'
 
         final = mock.MagicMock()
@@ -28,13 +33,14 @@ class TestMakeOutput(unittest.TestCase):
         reader.return_value = readermock
 
         final_uuid = final.manifest_locator()
+        num_retries = runner.num_retries
 
         cwlout = StringIO.StringIO()
         openmock = mock.MagicMock()
         final.open.return_value = openmock
         openmock.__enter__.return_value = cwlout
 
-        runner.make_output_collection("Test output", "tag0,tag1,tag2", {
+        _, runner.final_output_collection = runner.make_output_collection("Test output", ["foo"], "tag0,tag1,tag2", {
             "foo": {
                 "class": "File",
                 "location": "keep:99999999999999999999999999999991+99/foo.txt",
@@ -44,26 +50,31 @@ class TestMakeOutput(unittest.TestCase):
             "bar": {
                 "class": "File",
                 "location": "keep:99999999999999999999999999999992+99/bar.txt",
-                "basename": "baz.txt"
+                "basename": "baz.txt",
+                "size": 4
             }
         })
 
         final.copy.assert_has_calls([mock.call('bar.txt', 'baz.txt', overwrite=False, source_collection=readermock)])
         final.copy.assert_has_calls([mock.call('foo.txt', 'foo.txt', overwrite=False, source_collection=readermock)])
-        final.save_new.assert_has_calls([mock.call(ensure_unique_name=True, name='Test output', owner_uuid='zzzzz-j7d0g-zzzzzzzzzzzzzzz')])
+        final.save_new.assert_has_calls([mock.call(ensure_unique_name=True, name='Test output', owner_uuid='zzzzz-j7d0g-zzzzzzzzzzzzzzz', storage_classes=['foo'])])
         self.assertEqual("""{
     "bar": {
+        "basename": "baz.txt",
         "class": "File",
-        "location": "baz.txt"
+        "location": "baz.txt",
+        "size": 4
     },
     "foo": {
+        "basename": "foo.txt",
         "class": "File",
-        "location": "foo.txt"
+        "location": "foo.txt",
+        "size": 3
     }
 }""", cwlout.getvalue())
 
         self.assertIs(final, runner.final_output_collection)
         self.assertIs(final_uuid, runner.final_output_collection.manifest_locator())
-        self.api.links().create.assert_has_calls([mock.call(body={"head_uuid": final_uuid, "link_class": "tag", "name": "tag0"}), mock.call().execute()])
-        self.api.links().create.assert_has_calls([mock.call(body={"head_uuid": final_uuid, "link_class": "tag", "name": "tag1"}), mock.call().execute()])
-        self.api.links().create.assert_has_calls([mock.call(body={"head_uuid": final_uuid, "link_class": "tag", "name": "tag2"}), mock.call().execute()])
+        self.api.links().create.assert_has_calls([mock.call(body={"head_uuid": final_uuid, "link_class": "tag", "name": "tag0"}), mock.call().execute(num_retries=num_retries)])
+        self.api.links().create.assert_has_calls([mock.call(body={"head_uuid": final_uuid, "link_class": "tag", "name": "tag1"}), mock.call().execute(num_retries=num_retries)])
+        self.api.links().create.assert_has_calls([mock.call(body={"head_uuid": final_uuid, "link_class": "tag", "name": "tag2"}), mock.call().execute(num_retries=num_retries)])