Rails.configuration.arvados_v1_base.gsub /https?:\/\/|\/arvados\/v1/,''
end
- def render_content_from_database(markup)
- raw RedCloth.new(markup).to_html
+ def render_markup(markup)
+ raw RedCloth.new(markup.to_s).to_html(:refs_arvados, :textile) if markup
end
def human_readable_bytes_html(n)
link_uuid = attrvalue
end
link_name = opts[:link_text]
+ tags = ""
if !link_name
link_name = object.andand.default_name || resource_class.default_name
if opts[:friendly_name]
if attrvalue.respond_to? :friendly_link_name
- link_name = attrvalue.friendly_link_name
+ link_name = attrvalue.friendly_link_name opts[:lookup]
else
begin
- link_name = resource_class.find(link_uuid).friendly_link_name
- rescue RuntimeError
+ if resource_class.name == 'Collection'
+ link_name = collections_for_object(link_uuid).andand.first.andand.friendly_link_name
+ else
+ link_name = object_for_dataclass(resource_class, link_uuid).andand.friendly_link_name
+ end
+ rescue ArvadosApiClient::NotFoundException
# If that lookup failed, the link will too. So don't make one.
return attrvalue
end
end
end
+ if link_name.nil? or link_name.empty?
+ link_name = attrvalue
+ end
if opts[:with_class_name]
link_name = "#{resource_class.to_s}: #{link_name}"
end
if !opts[:no_tags] and resource_class == Collection
- Link.where(head_uuid: link_uuid, link_class: ["tag", "identifier"]).each do |tag|
- link_name += ' <span class="label label-info">' + html_escape(tag.name) + '</span>'
+ links_for_object(link_uuid).each do |tag|
+ if tag.link_class.in? ["tag", "identifier"]
+ tags += ' <span class="label label-info">'
+ tags += link_to tag.name, controller: "links", filters: [["link_class", "=", "tag"], ["name", "=", tag.name]].to_json
+ tags += '</span>'
+ end
end
end
if opts[:thumbnail] and resource_class == Collection
# add an image thumbnail if the collection consists of a single image file.
- Collection.where(uuid: link_uuid).each do |c|
+ collections_for_object(link_uuid).each do |c|
if c.files.length == 1 and CollectionsHelper::is_image c.files.first[1]
link_name += " "
link_name += image_tag "#{url_for c}/#{CollectionsHelper::file_path c.files.first}", style: "height: 4em; width: auto"
if opts[:no_link]
raw(link_name)
else
- link_to raw(link_name), { controller: resource_class.to_s.tableize, action: 'show', id: ((opts[:name_link].andand.uuid) || link_uuid) }, style_opts
+ (link_to raw(link_name), { controller: resource_class.to_s.tableize, action: 'show', id: ((opts[:name_link].andand.uuid) || link_uuid) }, style_opts) + raw(tags)
end
else
# just return attrvalue if it is not recognizable as an Arvados object or uuid.
- attrvalue
+ if attrvalue.nil? or (attrvalue.is_a? String and attrvalue.empty?)
+ "(none)"
+ else
+ attrvalue
+ end
end
end
def render_editable_attribute(object, attr, attrvalue=nil, htmloptions={})
attrvalue = object.send(attr) if attrvalue.nil?
- if !object.attribute_editable?(attr, :ever) or
- (!object.editable? and
- !object.owner_uuid.in?(my_folders.collect(&:uuid)))
- return ((attrvalue && attrvalue.length > 0 && attrvalue) ||
- (attr == 'name' and object.andand.default_name) ||
- '(none)')
+ if not object.attribute_editable?(attr)
+ if attrvalue && attrvalue.length > 0
+ return render_attribute_as_textile( object, attr, attrvalue, false )
+ else
+ return (attr == 'name' and object.andand.default_name) ||
+ '(none)'
+ end
end
input_type = 'text'
end
attrvalue = attrvalue.to_json if attrvalue.is_a? Hash or attrvalue.is_a? Array
+ rendervalue = render_attribute_as_textile( object, attr, attrvalue, false )
ajax_options = {
"data-pk" => {
@unique_id ||= (Time.now.to_f*1000000).to_i
span_id = object.uuid.to_s + '-' + attr.to_s + '-' + (@unique_id += 1).to_s
- span_tag = content_tag 'span', attrvalue.to_s, {
- "data-emptytext" => (object.andand.default_name || 'none'),
+ span_tag = content_tag 'span', rendervalue, {
+ "data-emptytext" => '(none)',
"data-placement" => "bottom",
"data-type" => input_type,
- "data-title" => "Edit #{attr.gsub '_', ' '}",
+ "data-title" => "Edit #{attr.to_s.gsub '_', ' '}",
"data-name" => attr,
"data-object-uuid" => object.uuid,
"data-toggle" => "manual",
+ "data-value" => attrvalue,
"id" => span_id,
- :class => "editable"
+ :class => "editable #{is_textile?( object, attr ) ? 'editable-textile' : ''}"
}.merge(htmloptions).merge(ajax_options)
edit_button = raw('<a href="#" class="btn btn-xs btn-default btn-nodecorate" data-toggle="x-editable tooltip" data-toggle-selector="#' + span_id + '" data-placement="top" title="' + (htmloptions[:tiptitle] || 'edit') + '"><i class="fa fa-fw fa-pencil"></i></a>')
if htmloptions[:btnplacement] == :left
else
attrvalue = ''
end
+ preconfigured_search_str = value_info[:search_for]
end
- if !object or
- !object.attribute_editable?(attr, :ever) or
- (!object.editable? and
- !object.owner_uuid.in?(my_folders.collect(&:uuid)))
+ if not object.andand.attribute_editable?(attr)
return link_to_if_arvados_object attrvalue
end
dn += '[value]'
end
- if dataclass == Collection
+ if (dataclass == Collection) or (dataclass == File)
selection_param = object.class.to_s.underscore + dn
display_value = attrvalue
if value_info.is_a?(Hash)
display_value = link.name
elsif value_info[:link_name]
display_value = value_info[:link_name]
+ elsif value_info[:selection_name]
+ display_value = value_info[:selection_name]
end
end
+ if (attr == :components) and (subattr.size > 2)
+ chooser_title = "Choose a #{dataclass == Collection ? 'dataset' : 'file'} for #{object.component_input_title(subattr[0], subattr[2])}:"
+ else
+ chooser_title = "Choose a #{dataclass == Collection ? 'dataset' : 'file'}:"
+ end
modal_path = choose_collections_path \
- ({ title: 'Choose a dataset:',
- filters: [['tail_uuid', '=', object.owner_uuid]].to_json,
+ ({ title: chooser_title,
+ filters: [['owner_uuid', '=', object.owner_uuid]].to_json,
action_name: 'OK',
action_href: pipeline_instance_path(id: object.uuid),
action_method: 'patch',
+ preconfigured_search_str: (preconfigured_search_str || ""),
action_data: {
merge: true,
+ use_preview_selection: dataclass == File ? true : nil,
selection_param: selection_param,
success: 'page-refresh'
}.to_json,
})
return content_tag('div', :class => 'input-group') do
- html = text_field_tag(dn, display_value, :class => 'form-control')
+ html = text_field_tag(dn, display_value,
+ :class =>
+ "form-control #{'required' if required}")
html + content_tag('span', :class => 'input-group-btn') do
link_to('Choose',
modal_path,
datatype = 'text'
end
+ # preload data
+ preload_uuids = []
+ items = []
selectables = []
+
attrtext = attrvalue
- if dataclass and dataclass.is_a? Class
+ if dataclass.is_a? Class and dataclass < ArvadosBase
+ objects = get_n_objects_of_class dataclass, 10
+ objects.each do |item|
+ items << item
+ preload_uuids << item.uuid
+ end
+ if attrvalue and !attrvalue.empty?
+ preload_uuids << attrvalue
+ end
+ preload_links_for_objects preload_uuids
+
if attrvalue and !attrvalue.empty?
- Link.where(head_uuid: attrvalue, link_class: ["tag", "identifier"]).each do |tag|
- attrtext += " [#{tag.name}]"
+ links_for_object(attrvalue).each do |link|
+ if link.link_class.in? ["tag", "identifier"]
+ attrtext += " [#{link.name}]"
+ end
end
selectables.append({name: attrtext, uuid: attrvalue, type: dataclass.to_s})
end
- #dataclass.where(uuid: attrvalue).each do |item|
- # selectables.append({name: item.uuid, uuid: item.uuid, type: dataclass.to_s})
- #end
itemuuids = []
- dataclass.limit(10).each do |item|
+ items.each do |item|
itemuuids << item.uuid
selectables.append({name: item.uuid, uuid: item.uuid, type: dataclass.to_s})
end
- Link.where(head_uuid: itemuuids, link_class: ["tag", "identifier"]).each do |tag|
- selectables.each do |selectable|
- if selectable['uuid'] == tag.head_uuid
- selectable['name'] += ' [' + tag.name + ']'
+
+ itemuuids.each do |itemuuid|
+ links_for_object(itemuuid).each do |link|
+ if link.link_class.in? ["tag", "identifier"]
+ selectables.each do |selectable|
+ if selectable['uuid'] == link.head_uuid
+ selectable['name'] += ' [' + link.name + ']'
+ end
+ end
end
end
end
render opts.merge(partial: "application/#{partial}")
end
end
-
- def fa_icon_class_for_object object
- case object.class.to_s.to_sym
- when :User
- 'fa-user'
- when :Group
+
+ RESOURCE_CLASS_ICONS = {
+ "Collection" => "fa-archive",
+ "Group" => "fa-users",
+ "Human" => "fa-male", # FIXME: Use a more inclusive icon.
+ "Job" => "fa-gears",
+ "KeepDisk" => "fa-hdd-o",
+ "KeepService" => "fa-exchange",
+ "Link" => "fa-arrows-h",
+ "Node" => "fa-cloud",
+ "PipelineInstance" => "fa-gears",
+ "PipelineTemplate" => "fa-gears",
+ "Repository" => "fa-code-fork",
+ "Specimen" => "fa-flask",
+ "Trait" => "fa-clipboard",
+ "User" => "fa-user",
+ "VirtualMachine" => "fa-terminal",
+ }
+ DEFAULT_ICON_CLASS = "fa-cube"
+
+ def fa_icon_class_for_class(resource_class, default=DEFAULT_ICON_CLASS)
+ RESOURCE_CLASS_ICONS.fetch(resource_class.to_s, default)
+ end
+
+ def fa_icon_class_for_uuid(uuid, default=DEFAULT_ICON_CLASS)
+ fa_icon_class_for_class(resource_class_for_uuid(uuid), default)
+ end
+
+ def fa_icon_class_for_object(object, default=DEFAULT_ICON_CLASS)
+ case class_name = object.class.to_s
+ when "Group"
object.group_class ? 'fa-folder' : 'fa-users'
- when :Job, :PipelineInstance, :PipelineTemplate
- 'fa-gears'
- when :Collection
- 'fa-archive'
- when :Specimen
- 'fa-flask'
- when :Trait
- 'fa-clipboard'
- when :Human
- 'fa-male'
- when :VirtualMachine
- 'fa-terminal'
- when :Repository
- 'fa-code-fork'
- when :Link
- 'fa-arrows-h'
- when :User
- 'fa-user'
- when :Node
- 'fa-cloud'
- when :KeepService
- 'fa-exchange'
- when :KeepDisk
- 'fa-hdd-o'
else
- 'fa-cube'
+ RESOURCE_CLASS_ICONS.fetch(class_name, default)
end
end
+
+ def chooser_preview_url_for object, use_preview_selection=false
+ case object.class.to_s
+ when 'Collection'
+ polymorphic_path(object, tab_pane: 'chooser_preview', use_preview_selection: use_preview_selection)
+ else
+ nil
+ end
+ end
+
+ def render_attribute_as_textile( object, attr, attrvalue, truncate )
+ if attrvalue && (is_textile? object, attr)
+ markup = render_markup attrvalue
+ markup = markup[0,markup.index('</p>')+4] if (truncate && markup.index('</p>'))
+ return markup
+ else
+ return attrvalue
+ end
+ end
+
+ def render_localized_date(date, opts="")
+ raw("<span class='utc-date' data-utc-date='#{date}' data-utc-date-opts='noseconds'>#{date}</span>")
+ end
+
+private
+ def is_textile?( object, attr )
+ is_textile = object.textile_attributes.andand.include?(attr)
+ end
end