18290: Merge branch 'main' into 18290-lsf-bsub-args-template

[arvados.git] / lib / config / generated_config.go

diff --git a/lib/config/generated_config.go b/lib/config/generated_config.go
index 6244b8dbdaba06d8ec8a9528bae601026872a6d1..2fe207eff8c500cdb4d71c7c45588449a57d681f 100644 (file)
--- a/lib/config/generated_config.go
+++ b/lib/config/generated_config.go
@@ -1027,14 +1027,23 @@ Clusters:
           AssignNodeHostname: "compute%<slot_number>d"
 
       LSF:
-        # Additional arguments to bsub when submitting Arvados
-        # containers as LSF jobs.
+        # Arguments to bsub when submitting Arvados containers as LSF jobs.
+        #
+        # Template variables starting with % will be substituted as follows:
+        #
+        # %U uuid
+        # %C number of VCPUs
+        # %M memory in MB
+        # %T tmp in MB
+        #
+        # Use %% to express a literal %. The %%J in the default will be changed
+        # to %J, which is interpreted by bsub itself.
         #
         # Note that the default arguments cause LSF to write two files
         # in /tmp on the compute node each time an Arvados container
         # runs. Ensure you have something in place to delete old files
-        # from /tmp, or adjust these arguments accordingly.
-        BsubArgumentsList: ["-o", "/tmp/crunch-run.%J.out", "-e", "/tmp/crunch-run.%J.err"]
+        # from /tmp, or adjust the "-o" and "-e" arguments accordingly.
+        BsubArgumentsList: ["-o", "/tmp/crunch-run.%%J.out", "-e", "/tmp/crunch-run.%%J.err", "-J", "%U", "-n", "%C", "-D", "%MMB", "-R", "rusage[mem=%MMB:tmp=%TMB] span[hosts=1]"]
 
         # Use sudo to switch to this user account when submitting LSF
         # jobs.