// Copyright (C) The Arvados Authors. All rights reserved. // // SPDX-License-Identifier: AGPL-3.0 package main import ( "context" "encoding/json" "fmt" "io" "runtime" "sync" "sync/atomic" "time" "git.arvados.org/arvados.git/sdk/go/arvados" "github.com/jmoiron/sqlx" ) func countCollections(c *arvados.Client, params arvados.ResourceListParams) (int, error) { var page arvados.CollectionList var zero int params.Limit = &zero params.Count = "exact" err := c.RequestAndDecode(&page, "GET", "arvados/v1/collections", nil, params) return page.ItemsAvailable, err } // EachCollection calls f once for every readable // collection. EachCollection stops if it encounters an error, such as // f returning a non-nil error. // // The progress function is called periodically with done (number of // times f has been called) and total (number of times f is expected // to be called). func EachCollection(ctx context.Context, db *sqlx.DB, c *arvados.Client, f func(arvados.Collection) error, progress func(done, total int)) error { if progress == nil { progress = func(_, _ int) {} } expectCount, err := countCollections(c, arvados.ResourceListParams{ IncludeTrash: true, IncludeOldVersions: true, }) if err != nil { return err } var newestModifiedAt time.Time rows, err := db.QueryxContext(ctx, `SELECT uuid, manifest_text, modified_at, portable_data_hash, replication_desired, storage_classes_desired, is_trashed FROM collections`) if err != nil { return err } callCount := 0 for rows.Next() { var coll arvados.Collection var classesDesired []byte err = rows.Scan(&coll.UUID, &coll.ManifestText, &coll.ModifiedAt, &coll.PortableDataHash, &coll.ReplicationDesired, &classesDesired, &coll.IsTrashed) if err != nil { rows.Close() return err } err = json.Unmarshal(classesDesired, &coll.StorageClassesDesired) if err != nil { rows.Close() return err } if newestModifiedAt.IsZero() || newestModifiedAt.Before(coll.ModifiedAt) { newestModifiedAt = coll.ModifiedAt } callCount++ err = f(coll) if err != nil { return err } progress(callCount, expectCount) } rows.Close() if err := rows.Err(); err != nil { return err } if checkCount, err := countCollections(c, arvados.ResourceListParams{ Filters: []arvados.Filter{{ Attr: "modified_at", Operator: "<=", Operand: newestModifiedAt}}, IncludeTrash: true, IncludeOldVersions: true, }); err != nil { return err } else if callCount < checkCount { return fmt.Errorf("Retrieved %d collections with modtime <= T=%q, but server now reports there are %d collections with modtime <= T", callCount, newestModifiedAt, checkCount) } return nil } func (bal *Balancer) updateCollections(ctx context.Context, c *arvados.Client, cluster *arvados.Cluster) error { ctx, cancel := context.WithCancel(ctx) defer cancel() defer bal.time("update_collections", "wall clock time to update collections")() threshold := time.Now() thresholdStr := threshold.Format(time.RFC3339Nano) var err error collQ := make(chan arvados.Collection, cluster.Collections.BalanceCollectionBuffers) go func() { defer close(collQ) err = EachCollection(ctx, bal.DB, c, func(coll arvados.Collection) error { if coll.ModifiedAt.After(threshold) { return io.EOF } if coll.IsTrashed { return nil } collQ <- coll return nil }, func(done, total int) { bal.logf("update collections: %d/%d", done, total) }) if err == io.EOF { err = nil } else if err != nil { bal.logf("error updating collections: %s", err) } }() var updated int64 var wg sync.WaitGroup for i := 0; i < runtime.NumCPU(); i++ { wg.Add(1) go func() { defer wg.Done() for coll := range collQ { blkids, err := coll.SizedDigests() if err != nil { bal.logf("%s: %s", coll.UUID, err) continue } repl := bal.BlockStateMap.GetConfirmedReplication(blkids, coll.StorageClassesDesired) classes, err := json.Marshal(coll.StorageClassesDesired) if err != nil { bal.logf("BUG? json.Marshal(%v) failed: %s", classes, err) continue } _, err = bal.DB.ExecContext(ctx, `update collections set replication_confirmed=$1, replication_confirmed_at=$2, storage_classes_confirmed=$3, storage_classes_confirmed_at=$2 where uuid=$4`, repl, thresholdStr, classes, coll.UUID) if err != nil { bal.logf("%s: update failed: %s", coll.UUID, err) continue } atomic.AddInt64(&updated, 1) } }() } wg.Wait() bal.logf("updated %d collections", updated) return err }