#!/usr/bin/env python from __future__ import print_function import argparse import arvados import arvados.commands._util as arv_cmd def parse_args(args): parser = argparse.ArgumentParser( description='List contents of a manifest', parents=[arv_cmd.retry_opt]) parser.add_argument('locator', type=str, help="""Collection UUID or locator""") parser.add_argument('-s', action='store_true', help="""List file sizes, in KiB.""") return parser.parse_args(args) def size_formatter(coll_file): return "{:>10}".format((coll_file.size() + 1023) / 1024) def name_formatter(coll_file): return "{}/{}".format(coll_file.stream_name(), coll_file.name) def main(args, stdout, stderr, api_client=None): args = parse_args(args) if api_client is None: api_client = arvados.api('v1') try: cr = arvados.CollectionReader(args.locator, api_client=api_client, num_retries=args.retries) cr.normalize() except (arvados.errors.ArgumentError, arvados.errors.NotFoundError) as error: print("arv-ls: error fetching collection: {}".format(error), file=stderr) return 1 formatters = [] if args.s: formatters.append(size_formatter) formatters.append(name_formatter) for f in cr.all_files(): print(*(info_func(f) for info_func in formatters), file=stdout) return 0