// Copyright (C) The Arvados Authors. All rights reserved. // // SPDX-License-Identifier: Apache-2.0 package arvados import ( "bytes" "context" "crypto/md5" "errors" "fmt" "io" "io/ioutil" "math/rand" "net/http" "os" "regexp" "runtime" "runtime/pprof" "strings" "sync" "sync/atomic" "testing" "time" check "gopkg.in/check.v1" ) var _ = check.Suite(&CollectionFSSuite{}) type keepClientStub struct { blocks map[string][]byte refreshable map[string]bool reads []string // locators from ReadAt() calls onWrite func(bufcopy []byte) // called from WriteBlock, before acquiring lock authToken string // client's auth token (used for signing locators) sigkey string // blob signing key sigttl time.Duration // blob signing ttl sync.RWMutex } var errStub404 = errors.New("404 block not found") func (kcs *keepClientStub) ReadAt(locator string, p []byte, off int) (int, error) { kcs.Lock() kcs.reads = append(kcs.reads, locator) kcs.Unlock() kcs.RLock() defer kcs.RUnlock() if err := VerifySignature(locator, kcs.authToken, kcs.sigttl, []byte(kcs.sigkey)); err != nil { return 0, err } buf := kcs.blocks[locator[:32]] if buf == nil { return 0, errStub404 } return copy(p, buf[off:]), nil } func (kcs *keepClientStub) BlockWrite(_ context.Context, opts BlockWriteOptions) (BlockWriteResponse, error) { if opts.Data == nil { panic("oops, stub is not made for this") } locator := SignLocator(fmt.Sprintf("%x+%d", md5.Sum(opts.Data), len(opts.Data)), kcs.authToken, time.Now().Add(kcs.sigttl), kcs.sigttl, []byte(kcs.sigkey)) buf := make([]byte, len(opts.Data)) copy(buf, opts.Data) if kcs.onWrite != nil { kcs.onWrite(buf) } for _, sc := range opts.StorageClasses { if sc != "default" { return BlockWriteResponse{}, fmt.Errorf("stub does not write storage class %q", sc) } } kcs.Lock() defer kcs.Unlock() kcs.blocks[locator[:32]] = buf return BlockWriteResponse{Locator: locator, Replicas: 1}, nil } var reRemoteSignature = regexp.MustCompile(`\+[AR][^+]*`) func (kcs *keepClientStub) LocalLocator(locator string) (string, error) { if strings.Contains(locator, "+A") { return locator, nil } kcs.Lock() defer kcs.Unlock() if strings.Contains(locator, "+R") { if len(locator) < 32 { return "", fmt.Errorf("bad locator: %q", locator) } if _, ok := kcs.blocks[locator[:32]]; !ok && !kcs.refreshable[locator[:32]] { return "", fmt.Errorf("kcs.refreshable[%q]==false", locator) } } locator = reRemoteSignature.ReplaceAllLiteralString(locator, "") locator = SignLocator(locator, kcs.authToken, time.Now().Add(kcs.sigttl), kcs.sigttl, []byte(kcs.sigkey)) return locator, nil } type CollectionFSSuite struct { client *Client coll Collection fs CollectionFileSystem kc *keepClientStub } func (s *CollectionFSSuite) SetUpTest(c *check.C) { s.client = NewClientFromEnv() s.client.AuthToken = fixtureActiveToken err := s.client.RequestAndDecode(&s.coll, "GET", "arvados/v1/collections/"+fixtureFooAndBarFilesInDirUUID, nil, nil) c.Assert(err, check.IsNil) s.kc = &keepClientStub{ blocks: map[string][]byte{ "3858f62230ac3c915f300c664312c63f": []byte("foobar"), }, sigkey: fixtureBlobSigningKey, sigttl: fixtureBlobSigningTTL, authToken: fixtureActiveToken, } s.fs, err = s.coll.FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) } func (s *CollectionFSSuite) TestSyncNonCanonicalManifest(c *check.C) { var coll Collection err := s.client.RequestAndDecode(&coll, "GET", "arvados/v1/collections/"+fixtureFooAndBarFilesInDirUUID, nil, nil) c.Assert(err, check.IsNil) mtxt := strings.Replace(coll.ManifestText, "3:3:bar 0:3:foo", "0:3:foo 3:3:bar", -1) c.Assert(mtxt, check.Not(check.Equals), coll.ManifestText) err = s.client.RequestAndDecode(&coll, "POST", "arvados/v1/collections", nil, map[string]interface{}{ "collection": map[string]interface{}{ "manifest_text": mtxt}}) c.Assert(err, check.IsNil) // In order for the rest of the test to work as intended, the API server // needs to retain the file ordering we set manually. We check that here. // We can't check `mtxt == coll.ManifestText` because the API server // might've returned new block signatures if the GET and POST happened in // different seconds. expectPattern := `\./dir1 \S+ 0:3:foo 3:3:bar\n` c.Assert(coll.ManifestText, check.Matches, expectPattern) fs, err := coll.FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) err = fs.Sync() c.Check(err, check.IsNil) // fs had no local changes, so Sync should not have saved // anything back to the API/database. (If it did, we would see // the manifest rewritten in canonical order.) var saved Collection err = s.client.RequestAndDecode(&saved, "GET", "arvados/v1/collections/"+coll.UUID, nil, nil) c.Assert(err, check.IsNil) c.Check(saved.ManifestText, check.Matches, expectPattern) } func (s *CollectionFSSuite) TestHttpFileSystemInterface(c *check.C) { _, ok := s.fs.(http.FileSystem) c.Check(ok, check.Equals, true) } func (s *CollectionFSSuite) TestUnattainableStorageClasses(c *check.C) { fs, err := (&Collection{ StorageClassesDesired: []string{"unobtainium"}, }).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f, err := fs.OpenFile("/foo", os.O_CREATE|os.O_WRONLY, 0777) c.Assert(err, check.IsNil) _, err = f.Write([]byte("food")) c.Assert(err, check.IsNil) err = f.Close() c.Assert(err, check.IsNil) _, err = fs.MarshalManifest(".") c.Assert(err, check.ErrorMatches, `.*stub does not write storage class \"unobtainium\"`) } func (s *CollectionFSSuite) TestColonInFilename(c *check.C) { fs, err := (&Collection{ ManifestText: "./foo:foo 3858f62230ac3c915f300c664312c63f+3 0:3:bar:bar\n", }).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f, err := fs.Open("/foo:foo") c.Assert(err, check.IsNil) fis, err := f.Readdir(0) c.Check(err, check.IsNil) c.Check(len(fis), check.Equals, 1) c.Check(fis[0].Name(), check.Equals, "bar:bar") } func (s *CollectionFSSuite) TestReaddirFull(c *check.C) { f, err := s.fs.Open("/dir1") c.Assert(err, check.IsNil) st, err := f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(2)) c.Check(st.IsDir(), check.Equals, true) fis, err := f.Readdir(0) c.Check(err, check.IsNil) c.Check(len(fis), check.Equals, 2) if len(fis) > 0 { c.Check(fis[0].Size(), check.Equals, int64(3)) } } func (s *CollectionFSSuite) TestReaddirLimited(c *check.C) { f, err := s.fs.Open("./dir1") c.Assert(err, check.IsNil) fis, err := f.Readdir(1) c.Check(err, check.IsNil) c.Check(len(fis), check.Equals, 1) if len(fis) > 0 { c.Check(fis[0].Size(), check.Equals, int64(3)) } fis, err = f.Readdir(1) c.Check(err, check.IsNil) c.Check(len(fis), check.Equals, 1) if len(fis) > 0 { c.Check(fis[0].Size(), check.Equals, int64(3)) } fis, err = f.Readdir(1) c.Check(len(fis), check.Equals, 0) c.Check(err, check.NotNil) c.Check(err, check.Equals, io.EOF) f, err = s.fs.Open("dir1") c.Assert(err, check.IsNil) fis, err = f.Readdir(1) c.Check(len(fis), check.Equals, 1) c.Assert(err, check.IsNil) fis, err = f.Readdir(2) c.Check(len(fis), check.Equals, 1) c.Assert(err, check.IsNil) fis, err = f.Readdir(2) c.Check(len(fis), check.Equals, 0) c.Assert(err, check.Equals, io.EOF) } func (s *CollectionFSSuite) TestPathMunge(c *check.C) { for _, path := range []string{".", "/", "./", "///", "/../", "/./.."} { f, err := s.fs.Open(path) c.Assert(err, check.IsNil) st, err := f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(1)) c.Check(st.IsDir(), check.Equals, true) } for _, path := range []string{"/dir1", "dir1", "./dir1", "///dir1//.//", "../dir1/../dir1/"} { c.Logf("%q", path) f, err := s.fs.Open(path) c.Assert(err, check.IsNil) st, err := f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(2)) c.Check(st.IsDir(), check.Equals, true) } } func (s *CollectionFSSuite) TestNotExist(c *check.C) { for _, path := range []string{"/no", "no", "./no", "n/o", "/n/o"} { f, err := s.fs.Open(path) c.Assert(f, check.IsNil) c.Assert(err, check.NotNil) c.Assert(os.IsNotExist(err), check.Equals, true) } } func (s *CollectionFSSuite) TestReadOnlyFile(c *check.C) { f, err := s.fs.OpenFile("/dir1/foo", os.O_RDONLY, 0) c.Assert(err, check.IsNil) st, err := f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(3)) n, err := f.Write([]byte("bar")) c.Check(n, check.Equals, 0) c.Check(err, check.Equals, ErrReadOnlyFile) } func (s *CollectionFSSuite) TestCreateFile(c *check.C) { f, err := s.fs.OpenFile("/new-file 1", os.O_RDWR|os.O_CREATE, 0) c.Assert(err, check.IsNil) st, err := f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(0)) n, err := f.Write([]byte("bar")) c.Check(n, check.Equals, 3) c.Check(err, check.IsNil) c.Check(f.Close(), check.IsNil) f, err = s.fs.OpenFile("/new-file 1", os.O_RDWR|os.O_CREATE|os.O_EXCL, 0) c.Check(f, check.IsNil) c.Assert(err, check.NotNil) f, err = s.fs.OpenFile("/new-file 1", os.O_RDWR, 0) c.Assert(err, check.IsNil) st, err = f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(3)) c.Check(f.Close(), check.IsNil) m, err := s.fs.MarshalManifest(".") c.Assert(err, check.IsNil) c.Check(m, check.Matches, `. 37b51d194a7513e45b56f6524f2d51f2\+3\+\S+ 0:3:new-file\\0401\n./dir1 .* 3:3:bar 0:3:foo\n`) } func (s *CollectionFSSuite) TestReadWriteFile(c *check.C) { maxBlockSize = 8 defer func() { maxBlockSize = 2 << 26 }() f, err := s.fs.OpenFile("/dir1/foo", os.O_RDWR, 0) c.Assert(err, check.IsNil) defer f.Close() st, err := f.Stat() c.Assert(err, check.IsNil) c.Check(st.Size(), check.Equals, int64(3)) f2, err := s.fs.OpenFile("/dir1/foo", os.O_RDWR, 0) c.Assert(err, check.IsNil) defer f2.Close() buf := make([]byte, 64) n, err := f.Read(buf) c.Check(n, check.Equals, 3) c.Check(err, check.Equals, io.EOF) c.Check(string(buf[:3]), check.DeepEquals, "foo") pos, err := f.Seek(-2, io.SeekCurrent) c.Check(pos, check.Equals, int64(1)) c.Check(err, check.IsNil) // Split a storedExtent in two, and insert a memExtent n, err = f.Write([]byte("*")) c.Check(n, check.Equals, 1) c.Check(err, check.IsNil) pos, err = f.Seek(0, io.SeekCurrent) c.Check(pos, check.Equals, int64(2)) c.Check(err, check.IsNil) pos, err = f.Seek(0, io.SeekStart) c.Check(pos, check.Equals, int64(0)) c.Check(err, check.IsNil) rbuf, err := ioutil.ReadAll(f) c.Check(len(rbuf), check.Equals, 3) c.Check(err, check.IsNil) c.Check(string(rbuf), check.Equals, "f*o") // Write multiple blocks in one call f.Seek(1, io.SeekStart) n, err = f.Write([]byte("0123456789abcdefg")) c.Check(n, check.Equals, 17) c.Check(err, check.IsNil) pos, err = f.Seek(0, io.SeekCurrent) c.Check(pos, check.Equals, int64(18)) c.Check(err, check.IsNil) pos, err = f.Seek(-18, io.SeekCurrent) c.Check(pos, check.Equals, int64(0)) c.Check(err, check.IsNil) n, err = io.ReadFull(f, buf) c.Check(n, check.Equals, 18) c.Check(err, check.Equals, io.ErrUnexpectedEOF) c.Check(string(buf[:n]), check.Equals, "f0123456789abcdefg") buf2, err := ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "f0123456789abcdefg") // truncate to current size err = f.Truncate(18) c.Check(err, check.IsNil) f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "f0123456789abcdefg") // shrink to zero some data f.Truncate(15) f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "f0123456789abcd") // grow to partial block/extent f.Truncate(20) f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "f0123456789abcd\x00\x00\x00\x00\x00") f.Truncate(0) f2.Seek(0, io.SeekStart) f2.Write([]byte("12345678abcdefghijkl")) // grow to block/extent boundary f.Truncate(64) f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(len(buf2), check.Equals, 64) c.Check(len(f.(*filehandle).inode.(*filenode).segments), check.Equals, 8) // shrink to block/extent boundary err = f.Truncate(32) c.Check(err, check.IsNil) f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(len(buf2), check.Equals, 32) c.Check(len(f.(*filehandle).inode.(*filenode).segments), check.Equals, 4) // shrink to partial block/extent err = f.Truncate(15) c.Check(err, check.IsNil) f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "12345678abcdefg") c.Check(len(f.(*filehandle).inode.(*filenode).segments), check.Equals, 2) // Force flush to ensure the block "12345678" gets stored, so // we know what to expect in the final manifest below. _, err = s.fs.MarshalManifest(".") c.Check(err, check.IsNil) // Truncate to size=3 while f2's ptr is at 15 err = f.Truncate(3) c.Check(err, check.IsNil) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "") f2.Seek(0, io.SeekStart) buf2, err = ioutil.ReadAll(f2) c.Check(err, check.IsNil) c.Check(string(buf2), check.Equals, "123") c.Check(len(f.(*filehandle).inode.(*filenode).segments), check.Equals, 1) m, err := s.fs.MarshalManifest(".") c.Check(err, check.IsNil) m = regexp.MustCompile(`\+A[^\+ ]+`).ReplaceAllLiteralString(m, "") c.Check(m, check.Equals, "./dir1 3858f62230ac3c915f300c664312c63f+6 25d55ad283aa400af464c76d713c07ad+8 3:3:bar 6:3:foo\n") c.Check(s.fs.Size(), check.Equals, int64(6)) } func (s *CollectionFSSuite) TestSeekSparse(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f, err := fs.OpenFile("test", os.O_CREATE|os.O_RDWR, 0755) c.Assert(err, check.IsNil) defer f.Close() checkSize := func(size int64) { fi, err := f.Stat() c.Assert(err, check.IsNil) c.Check(fi.Size(), check.Equals, size) f, err := fs.OpenFile("test", os.O_CREATE|os.O_RDWR, 0755) c.Assert(err, check.IsNil) defer f.Close() fi, err = f.Stat() c.Check(err, check.IsNil) c.Check(fi.Size(), check.Equals, size) pos, err := f.Seek(0, io.SeekEnd) c.Check(err, check.IsNil) c.Check(pos, check.Equals, size) } f.Seek(2, io.SeekEnd) checkSize(0) f.Write([]byte{1}) checkSize(3) f.Seek(2, io.SeekCurrent) checkSize(3) f.Write([]byte{}) checkSize(5) f.Seek(8, io.SeekStart) checkSize(5) n, err := f.Read(make([]byte, 1)) c.Check(n, check.Equals, 0) c.Check(err, check.Equals, io.EOF) checkSize(5) f.Write([]byte{1, 2, 3}) checkSize(11) } func (s *CollectionFSSuite) TestMarshalCopiesRemoteBlocks(c *check.C) { foo := "foo" bar := "bar" hash := map[string]string{ foo: fmt.Sprintf("%x", md5.Sum([]byte(foo))), bar: fmt.Sprintf("%x", md5.Sum([]byte(bar))), } fs, err := (&Collection{ ManifestText: ". " + hash[foo] + "+3+Rzaaaa-foo@bab " + hash[bar] + "+3+A12345@ffffff 0:2:fo.txt 2:4:obar.txt\n", }).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) manifest, err := fs.MarshalManifest(".") c.Check(manifest, check.Equals, "") c.Check(err, check.NotNil) s.kc.refreshable = map[string]bool{hash[bar]: true} for _, sigIn := range []string{"Rzaaaa-foo@bab", "A12345@abcde"} { fs, err = (&Collection{ ManifestText: ". " + hash[foo] + "+3+A12345@fffff " + hash[bar] + "+3+" + sigIn + " 0:2:fo.txt 2:4:obar.txt\n", }).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) manifest, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) // Both blocks should now have +A signatures. c.Check(manifest, check.Matches, `.*\+A.* .*\+A.*\n`) c.Check(manifest, check.Not(check.Matches), `.*\+R.*\n`) } } func (s *CollectionFSSuite) TestMarshalSmallBlocks(c *check.C) { maxBlockSize = 8 defer func() { maxBlockSize = 2 << 26 }() var err error s.fs, err = (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) for _, name := range []string{"foo", "bar", "baz"} { f, err := s.fs.OpenFile(name, os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) f.Write([]byte(name)) f.Close() } m, err := s.fs.MarshalManifest(".") c.Check(err, check.IsNil) m = regexp.MustCompile(`\+A[^\+ ]+`).ReplaceAllLiteralString(m, "") c.Check(m, check.Equals, ". c3c23db5285662ef7172373df0003206+6 acbd18db4cc2f85cedef654fccc4a4d8+3 0:3:bar 3:3:baz 6:3:foo\n") } func (s *CollectionFSSuite) TestMkdir(c *check.C) { err := s.fs.Mkdir("foo/bar", 0755) c.Check(err, check.Equals, os.ErrNotExist) f, err := s.fs.OpenFile("foo/bar", os.O_CREATE, 0) c.Check(err, check.Equals, os.ErrNotExist) err = s.fs.Mkdir("foo", 0755) c.Check(err, check.IsNil) f, err = s.fs.OpenFile("foo/bar", os.O_CREATE|os.O_WRONLY, 0) c.Check(err, check.IsNil) if err == nil { defer f.Close() f.Write([]byte("foo")) } // mkdir fails if a file already exists with that name err = s.fs.Mkdir("foo/bar", 0755) c.Check(err, check.NotNil) err = s.fs.Remove("foo/bar") c.Check(err, check.IsNil) // mkdir succeeds after the file is deleted err = s.fs.Mkdir("foo/bar", 0755) c.Check(err, check.IsNil) // creating a file in a nonexistent subdir should still fail f, err = s.fs.OpenFile("foo/bar/baz/foo.txt", os.O_CREATE|os.O_WRONLY, 0) c.Check(err, check.Equals, os.ErrNotExist) f, err = s.fs.OpenFile("foo/bar/foo.txt", os.O_CREATE|os.O_WRONLY, 0) c.Check(err, check.IsNil) if err == nil { defer f.Close() f.Write([]byte("foo")) } // creating foo/bar as a regular file should fail f, err = s.fs.OpenFile("foo/bar", os.O_CREATE|os.O_EXCL, 0) c.Check(err, check.NotNil) // creating foo/bar as a directory should fail f, err = s.fs.OpenFile("foo/bar", os.O_CREATE|os.O_EXCL, os.ModeDir) c.Check(err, check.NotNil) err = s.fs.Mkdir("foo/bar", 0755) c.Check(err, check.NotNil) m, err := s.fs.MarshalManifest(".") c.Check(err, check.IsNil) m = regexp.MustCompile(`\+A[^\+ ]+`).ReplaceAllLiteralString(m, "") c.Check(m, check.Equals, "./dir1 3858f62230ac3c915f300c664312c63f+6 3:3:bar 0:3:foo\n./foo/bar acbd18db4cc2f85cedef654fccc4a4d8+3 0:3:foo.txt\n") } func (s *CollectionFSSuite) TestConcurrentWriters(c *check.C) { if testing.Short() { c.Skip("slow") } maxBlockSize = 8 defer func() { maxBlockSize = 1 << 26 }() var wg sync.WaitGroup for n := 0; n < 128; n++ { wg.Add(1) go func() { defer wg.Done() f, err := s.fs.OpenFile("/dir1/foo", os.O_RDWR, 0) c.Assert(err, check.IsNil) defer f.Close() for i := 0; i < 1024; i++ { r := rand.Uint32() switch { case r%11 == 0: _, err := s.fs.MarshalManifest(".") c.Check(err, check.IsNil) case r&3 == 0: f.Truncate(int64(rand.Intn(64))) case r&3 == 1: f.Seek(int64(rand.Intn(64)), io.SeekStart) case r&3 == 2: _, err := f.Write([]byte("beep boop")) c.Check(err, check.IsNil) case r&3 == 3: _, err := ioutil.ReadAll(f) c.Check(err, check.IsNil) } } }() } wg.Wait() f, err := s.fs.OpenFile("/dir1/foo", os.O_RDWR, 0) c.Assert(err, check.IsNil) defer f.Close() buf, err := ioutil.ReadAll(f) c.Check(err, check.IsNil) c.Logf("after lots of random r/w/seek/trunc, buf is %q", buf) } func (s *CollectionFSSuite) TestRandomWrites(c *check.C) { maxBlockSize = 40 defer func() { maxBlockSize = 2 << 26 }() var err error s.fs, err = (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) const nfiles = 256 const ngoroutines = 256 var wg sync.WaitGroup for n := 0; n < ngoroutines; n++ { wg.Add(1) go func(n int) { defer wg.Done() expect := make([]byte, 0, 64) wbytes := []byte("there's no simple explanation for anything important that any of us do") f, err := s.fs.OpenFile(fmt.Sprintf("random-%d", n), os.O_RDWR|os.O_CREATE|os.O_EXCL, 0) c.Assert(err, check.IsNil) defer f.Close() for i := 0; i < nfiles; i++ { trunc := rand.Intn(65) woff := rand.Intn(trunc + 1) wbytes = wbytes[:rand.Intn(64-woff+1)] for buf, i := expect[:cap(expect)], len(expect); i < trunc; i++ { buf[i] = 0 } expect = expect[:trunc] if trunc < woff+len(wbytes) { expect = expect[:woff+len(wbytes)] } copy(expect[woff:], wbytes) f.Truncate(int64(trunc)) pos, err := f.Seek(int64(woff), io.SeekStart) c.Check(pos, check.Equals, int64(woff)) c.Check(err, check.IsNil) n, err := f.Write(wbytes) c.Check(n, check.Equals, len(wbytes)) c.Check(err, check.IsNil) pos, err = f.Seek(0, io.SeekStart) c.Check(pos, check.Equals, int64(0)) c.Check(err, check.IsNil) buf, err := ioutil.ReadAll(f) c.Check(string(buf), check.Equals, string(expect)) c.Check(err, check.IsNil) } }(n) } wg.Wait() for n := 0; n < ngoroutines; n++ { f, err := s.fs.OpenFile(fmt.Sprintf("random-%d", n), os.O_RDONLY, 0) c.Assert(err, check.IsNil) f.(*filehandle).inode.(*filenode).waitPrune() s.checkMemSize(c, f) defer f.Close() } root, err := s.fs.Open("/") c.Assert(err, check.IsNil) defer root.Close() fi, err := root.Readdir(-1) c.Check(err, check.IsNil) c.Check(len(fi), check.Equals, nfiles) _, err = s.fs.MarshalManifest(".") c.Check(err, check.IsNil) // TODO: check manifest content } func (s *CollectionFSSuite) TestRemove(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) err = fs.Mkdir("dir0", 0755) c.Assert(err, check.IsNil) err = fs.Mkdir("dir1", 0755) c.Assert(err, check.IsNil) err = fs.Mkdir("dir1/dir2", 0755) c.Assert(err, check.IsNil) err = fs.Mkdir("dir1/dir3", 0755) c.Assert(err, check.IsNil) err = fs.Remove("dir0") c.Check(err, check.IsNil) err = fs.Remove("dir0") c.Check(err, check.Equals, os.ErrNotExist) err = fs.Remove("dir1/dir2/.") c.Check(err, check.Equals, ErrInvalidArgument) err = fs.Remove("dir1/dir2/..") c.Check(err, check.Equals, ErrInvalidArgument) err = fs.Remove("dir1") c.Check(err, check.Equals, ErrDirectoryNotEmpty) err = fs.Remove("dir1/dir2/../../../dir1") c.Check(err, check.Equals, ErrDirectoryNotEmpty) err = fs.Remove("dir1/dir3/") c.Check(err, check.IsNil) err = fs.RemoveAll("dir1") c.Check(err, check.IsNil) err = fs.RemoveAll("dir1") c.Check(err, check.IsNil) } func (s *CollectionFSSuite) TestRenameError(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) err = fs.Mkdir("first", 0755) c.Assert(err, check.IsNil) err = fs.Mkdir("first/second", 0755) c.Assert(err, check.IsNil) f, err := fs.OpenFile("first/second/file", os.O_CREATE|os.O_WRONLY, 0755) c.Assert(err, check.IsNil) f.Write([]byte{1, 2, 3, 4, 5}) f.Close() err = fs.Rename("first", "first/second/third") c.Check(err, check.Equals, ErrInvalidArgument) err = fs.Rename("first", "first/third") c.Check(err, check.Equals, ErrInvalidArgument) err = fs.Rename("first/second", "second") c.Check(err, check.IsNil) f, err = fs.OpenFile("second/file", 0, 0) c.Assert(err, check.IsNil) data, err := ioutil.ReadAll(f) c.Check(err, check.IsNil) c.Check(data, check.DeepEquals, []byte{1, 2, 3, 4, 5}) } func (s *CollectionFSSuite) TestRenameDirectory(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) err = fs.Mkdir("foo", 0755) c.Assert(err, check.IsNil) err = fs.Mkdir("bar", 0755) c.Assert(err, check.IsNil) err = fs.Rename("bar", "baz") c.Check(err, check.IsNil) err = fs.Rename("foo", "baz") c.Check(err, check.NotNil) err = fs.Rename("foo", "baz/") c.Check(err, check.IsNil) err = fs.Rename("baz/foo", ".") c.Check(err, check.Equals, ErrInvalidArgument) err = fs.Rename("baz/foo/", ".") c.Check(err, check.Equals, ErrInvalidArgument) } func (s *CollectionFSSuite) TestRename(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) const ( outer = 16 inner = 16 ) for i := 0; i < outer; i++ { err = fs.Mkdir(fmt.Sprintf("dir%d", i), 0755) c.Assert(err, check.IsNil) for j := 0; j < inner; j++ { err = fs.Mkdir(fmt.Sprintf("dir%d/dir%d", i, j), 0755) c.Assert(err, check.IsNil) for _, fnm := range []string{ fmt.Sprintf("dir%d/file%d", i, j), fmt.Sprintf("dir%d/dir%d/file%d", i, j, j), } { f, err := fs.OpenFile(fnm, os.O_CREATE|os.O_WRONLY, 0755) c.Assert(err, check.IsNil) _, err = f.Write([]byte("beep")) c.Assert(err, check.IsNil) f.Close() } } } var wg sync.WaitGroup for i := 0; i < outer; i++ { for j := 0; j < inner; j++ { wg.Add(1) go func(i, j int) { defer wg.Done() oldname := fmt.Sprintf("dir%d/dir%d/file%d", i, j, j) newname := fmt.Sprintf("dir%d/newfile%d", i, inner-j-1) _, err := fs.Open(newname) c.Check(err, check.Equals, os.ErrNotExist) err = fs.Rename(oldname, newname) c.Check(err, check.IsNil) f, err := fs.Open(newname) c.Check(err, check.IsNil) f.Close() }(i, j) wg.Add(1) go func(i, j int) { defer wg.Done() // oldname does not exist err := fs.Rename( fmt.Sprintf("dir%d/dir%d/missing", i, j), fmt.Sprintf("dir%d/dir%d/file%d", outer-i-1, j, j)) c.Check(err, check.ErrorMatches, `.*does not exist`) // newname parent dir does not exist err = fs.Rename( fmt.Sprintf("dir%d/dir%d", i, j), fmt.Sprintf("dir%d/missing/irrelevant", outer-i-1)) c.Check(err, check.ErrorMatches, `.*does not exist`) // oldname parent dir is a file err = fs.Rename( fmt.Sprintf("dir%d/file%d/patherror", i, j), fmt.Sprintf("dir%d/irrelevant", i)) c.Check(err, check.ErrorMatches, `.*not a directory`) // newname parent dir is a file err = fs.Rename( fmt.Sprintf("dir%d/dir%d/file%d", i, j, j), fmt.Sprintf("dir%d/file%d/patherror", i, inner-j-1)) c.Check(err, check.ErrorMatches, `.*not a directory`) }(i, j) } } wg.Wait() f, err := fs.OpenFile("dir1/newfile3", 0, 0) c.Assert(err, check.IsNil) c.Check(f.Size(), check.Equals, int64(4)) buf, err := ioutil.ReadAll(f) c.Check(buf, check.DeepEquals, []byte("beep")) c.Check(err, check.IsNil) _, err = fs.Open("dir1/dir1/file1") c.Check(err, check.Equals, os.ErrNotExist) } func (s *CollectionFSSuite) TestPersist(c *check.C) { maxBlockSize = 1024 defer func() { maxBlockSize = 2 << 26 }() var err error s.fs, err = (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) err = s.fs.Mkdir("d:r", 0755) c.Assert(err, check.IsNil) expect := map[string][]byte{} var wg sync.WaitGroup for _, name := range []string{"random 1", "random:2", "random\\3", "d:r/random4"} { buf := make([]byte, 500) rand.Read(buf) expect[name] = buf f, err := s.fs.OpenFile(name, os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) // Note: we don't close the file until after the test // is done. Writes to unclosed files should persist. defer f.Close() wg.Add(1) go func() { defer wg.Done() for i := 0; i < len(buf); i += 5 { _, err := f.Write(buf[i : i+5]) c.Assert(err, check.IsNil) } }() } wg.Wait() m, err := s.fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Logf("%q", m) root, err := s.fs.Open("/") c.Assert(err, check.IsNil) defer root.Close() fi, err := root.Readdir(-1) c.Check(err, check.IsNil) c.Check(len(fi), check.Equals, 4) persisted, err := (&Collection{ManifestText: m}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) root, err = persisted.Open("/") c.Assert(err, check.IsNil) defer root.Close() fi, err = root.Readdir(-1) c.Check(err, check.IsNil) c.Check(len(fi), check.Equals, 4) for name, content := range expect { c.Logf("read %q", name) f, err := persisted.Open(name) c.Assert(err, check.IsNil) defer f.Close() buf, err := ioutil.ReadAll(f) c.Check(err, check.IsNil) c.Check(buf, check.DeepEquals, content) } } func (s *CollectionFSSuite) TestPersistEmptyFilesAndDirs(c *check.C) { var err error s.fs, err = (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) for _, name := range []string{"dir", "dir/zerodir", "empty", "not empty", "not empty/empty", "zero", "zero/zero"} { err = s.fs.Mkdir(name, 0755) c.Assert(err, check.IsNil) } expect := map[string][]byte{ "0": nil, "00": {}, "one": {1}, "dir/0": nil, "dir/two": {1, 2}, "dir/zero": nil, "dir/zerodir/zero": nil, "zero/zero/zero": nil, } for name, data := range expect { f, err := s.fs.OpenFile(name, os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) if data != nil { _, err := f.Write(data) c.Assert(err, check.IsNil) } f.Close() } m, err := s.fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Logf("%q", m) persisted, err := (&Collection{ManifestText: m}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) for name, data := range expect { _, err = persisted.Open("bogus-" + name) c.Check(err, check.NotNil) f, err := persisted.Open(name) c.Assert(err, check.IsNil) if data == nil { data = []byte{} } buf, err := ioutil.ReadAll(f) c.Check(err, check.IsNil) c.Check(buf, check.DeepEquals, data) } expectDir := map[string]int{ "empty": 0, "not empty": 1, "not empty/empty": 0, } for name, expectLen := range expectDir { _, err := persisted.Open(name + "/bogus") c.Check(err, check.NotNil) d, err := persisted.Open(name) defer d.Close() c.Check(err, check.IsNil) fi, err := d.Readdir(-1) c.Check(err, check.IsNil) c.Check(fi, check.HasLen, expectLen) } } func (s *CollectionFSSuite) TestOpenFileFlags(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f, err := fs.OpenFile("missing", os.O_WRONLY, 0) c.Check(f, check.IsNil) c.Check(err, check.ErrorMatches, `file does not exist`) f, err = fs.OpenFile("new", os.O_CREATE|os.O_RDONLY, 0) c.Assert(err, check.IsNil) defer f.Close() n, err := f.Write([]byte{1, 2, 3}) c.Check(n, check.Equals, 0) c.Check(err, check.ErrorMatches, `read-only file`) n, err = f.Read(make([]byte, 1)) c.Check(n, check.Equals, 0) c.Check(err, check.Equals, io.EOF) f, err = fs.OpenFile("new", os.O_RDWR, 0) c.Assert(err, check.IsNil) defer f.Close() _, err = f.Write([]byte{4, 5, 6}) c.Check(err, check.IsNil) fi, err := f.Stat() c.Assert(err, check.IsNil) c.Check(fi.Size(), check.Equals, int64(3)) f, err = fs.OpenFile("new", os.O_TRUNC|os.O_RDWR, 0) c.Assert(err, check.IsNil) defer f.Close() pos, err := f.Seek(0, io.SeekEnd) c.Check(pos, check.Equals, int64(0)) c.Check(err, check.IsNil) fi, err = f.Stat() c.Assert(err, check.IsNil) c.Check(fi.Size(), check.Equals, int64(0)) fs.Remove("new") buf := make([]byte, 64) f, err = fs.OpenFile("append", os.O_EXCL|os.O_CREATE|os.O_RDWR|os.O_APPEND, 0) c.Assert(err, check.IsNil) f.Write([]byte{1, 2, 3}) f.Seek(0, io.SeekStart) n, _ = f.Read(buf[:1]) c.Check(n, check.Equals, 1) c.Check(buf[:1], check.DeepEquals, []byte{1}) pos, err = f.Seek(0, io.SeekCurrent) c.Assert(err, check.IsNil) c.Check(pos, check.Equals, int64(1)) f.Write([]byte{4, 5, 6}) pos, err = f.Seek(0, io.SeekCurrent) c.Assert(err, check.IsNil) c.Check(pos, check.Equals, int64(6)) f.Seek(0, io.SeekStart) n, err = f.Read(buf) c.Check(buf[:n], check.DeepEquals, []byte{1, 2, 3, 4, 5, 6}) c.Check(err, check.Equals, io.EOF) f.Close() f, err = fs.OpenFile("append", os.O_RDWR|os.O_APPEND, 0) c.Assert(err, check.IsNil) pos, err = f.Seek(0, io.SeekCurrent) c.Check(pos, check.Equals, int64(0)) c.Check(err, check.IsNil) f.Read(buf[:3]) pos, _ = f.Seek(0, io.SeekCurrent) c.Check(pos, check.Equals, int64(3)) f.Write([]byte{7, 8, 9}) pos, err = f.Seek(0, io.SeekCurrent) c.Check(err, check.IsNil) c.Check(pos, check.Equals, int64(9)) f.Close() f, err = fs.OpenFile("wronly", os.O_CREATE|os.O_WRONLY, 0) c.Assert(err, check.IsNil) n, err = f.Write([]byte{3, 2, 1}) c.Check(n, check.Equals, 3) c.Check(err, check.IsNil) pos, _ = f.Seek(0, io.SeekCurrent) c.Check(pos, check.Equals, int64(3)) pos, _ = f.Seek(0, io.SeekStart) c.Check(pos, check.Equals, int64(0)) n, err = f.Read(buf) c.Check(n, check.Equals, 0) c.Check(err, check.ErrorMatches, `.*O_WRONLY.*`) f, err = fs.OpenFile("wronly", os.O_RDONLY, 0) c.Assert(err, check.IsNil) n, _ = f.Read(buf) c.Check(buf[:n], check.DeepEquals, []byte{3, 2, 1}) f, err = fs.OpenFile("unsupported", os.O_CREATE|os.O_SYNC, 0) c.Check(f, check.IsNil) c.Check(err, check.NotNil) f, err = fs.OpenFile("append", os.O_RDWR|os.O_WRONLY, 0) c.Check(f, check.IsNil) c.Check(err, check.ErrorMatches, `invalid flag.*`) } func (s *CollectionFSSuite) TestFlushFullBlocksWritingLongFile(c *check.C) { defer func(cw, mbs int) { concurrentWriters = cw maxBlockSize = mbs }(concurrentWriters, maxBlockSize) concurrentWriters = 2 maxBlockSize = 1024 proceed := make(chan struct{}) var started, concurrent int32 blk2done := false s.kc.onWrite = func([]byte) { atomic.AddInt32(&concurrent, 1) switch atomic.AddInt32(&started, 1) { case 1: // Wait until block 2 starts and finishes, and block 3 starts select { case <-proceed: c.Check(blk2done, check.Equals, true) case <-time.After(time.Second): c.Error("timed out") } case 2: time.Sleep(time.Millisecond) blk2done = true case 3: close(proceed) default: time.Sleep(time.Millisecond) } c.Check(atomic.AddInt32(&concurrent, -1) < int32(concurrentWriters), check.Equals, true) } fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f, err := fs.OpenFile("50K", os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) defer f.Close() data := make([]byte, 500) rand.Read(data) for i := 0; i < 100; i++ { n, err := f.Write(data) c.Assert(n, check.Equals, len(data)) c.Assert(err, check.IsNil) } currentMemExtents := func() (memExtents []int) { for idx, e := range f.(*filehandle).inode.(*filenode).segments { switch e.(type) { case *memSegment: memExtents = append(memExtents, idx) } } return } f.(*filehandle).inode.(*filenode).waitPrune() c.Check(currentMemExtents(), check.HasLen, 1) m, err := fs.MarshalManifest(".") c.Check(m, check.Matches, `[^:]* 0:50000:50K\n`) c.Check(err, check.IsNil) c.Check(currentMemExtents(), check.HasLen, 0) } // Ensure blocks get flushed to disk if a lot of data is written to // small files/directories without calling sync(). // // Write four 512KiB files into each of 256 top-level dirs (total // 512MiB), calling Flush() every 8 dirs. Ensure memory usage never // exceeds 24MiB (4 concurrentWriters * 2MiB + 8 unflushed dirs * // 2MiB). func (s *CollectionFSSuite) TestFlushAll(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) s.kc.onWrite = func([]byte) { // discard flushed data -- otherwise the stub will use // unlimited memory time.Sleep(time.Millisecond) s.kc.Lock() defer s.kc.Unlock() s.kc.blocks = map[string][]byte{} } for i := 0; i < 256; i++ { buf := bytes.NewBuffer(make([]byte, 524288)) fmt.Fprintf(buf, "test file in dir%d", i) dir := fmt.Sprintf("dir%d", i) fs.Mkdir(dir, 0755) for j := 0; j < 2; j++ { f, err := fs.OpenFile(fmt.Sprintf("%s/file%d", dir, j), os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) defer f.Close() _, err = io.Copy(f, buf) c.Assert(err, check.IsNil) } if i%8 == 0 { fs.Flush("", true) } size := fs.MemorySize() if !c.Check(size <= 1<<24, check.Equals, true) { c.Logf("at dir%d fs.MemorySize()=%d", i, size) return } } } // Ensure short blocks at the end of a stream don't get flushed by // Flush(false). // // Write 67x 1MiB files to each of 8 dirs, and check that 8 full 64MiB // blocks have been flushed while 8x 3MiB is still buffered in memory. func (s *CollectionFSSuite) TestFlushFullBlocksOnly(c *check.C) { fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) var flushed int64 s.kc.onWrite = func(p []byte) { atomic.AddInt64(&flushed, int64(len(p))) } nDirs := int64(8) nFiles := int64(67) megabyte := make([]byte, 1<<20) for i := int64(0); i < nDirs; i++ { dir := fmt.Sprintf("dir%d", i) fs.Mkdir(dir, 0755) for j := int64(0); j < nFiles; j++ { f, err := fs.OpenFile(fmt.Sprintf("%s/file%d", dir, j), os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) defer f.Close() _, err = f.Write(megabyte) c.Assert(err, check.IsNil) } } inodebytes := int64((nDirs*(nFiles+1) + 1) * 64) c.Check(fs.MemorySize(), check.Equals, nDirs*nFiles*(1<<20+64)+inodebytes) c.Check(flushed, check.Equals, int64(0)) waitForFlush := func(expectUnflushed, expectFlushed int64) { for deadline := time.Now().Add(5 * time.Second); fs.MemorySize() > expectUnflushed && time.Now().Before(deadline); time.Sleep(10 * time.Millisecond) { } c.Check(fs.MemorySize(), check.Equals, expectUnflushed) c.Check(flushed, check.Equals, expectFlushed) } // Nothing flushed yet waitForFlush(nDirs*nFiles*(1<<20+64)+inodebytes, 0) // Flushing a non-empty dir "/" is non-recursive and there are // no top-level files, so this has no effect fs.Flush("/", false) waitForFlush(nDirs*nFiles*(1<<20+64)+inodebytes, 0) // Flush the full block in dir0 fs.Flush("dir0", false) bigloclen := int64(32 + 9 + 51 + 64) // md5 + "+" + "67xxxxxx" + "+Axxxxxx..." + 64 (see (storedSegment)memorySize) waitForFlush((nDirs*nFiles-64)*(1<<20+64)+inodebytes+bigloclen*64, 64<<20) err = fs.Flush("dir-does-not-exist", false) c.Check(err, check.NotNil) // Flush full blocks in all dirs fs.Flush("", false) waitForFlush(nDirs*3*(1<<20+64)+inodebytes+bigloclen*64*nDirs, nDirs*64<<20) // Flush non-full blocks, too fs.Flush("", true) smallloclen := int64(32 + 8 + 51 + 64) // md5 + "+" + "3xxxxxx" + "+Axxxxxx..." + 64 (see (storedSegment)memorySize) waitForFlush(inodebytes+bigloclen*64*nDirs+smallloclen*3*nDirs, nDirs*67<<20) } // Even when writing lots of files/dirs from different goroutines, as // long as Flush(dir,false) is called after writing each file, // unflushed data should be limited to one full block per // concurrentWriter, plus one nearly-full block at the end of each // dir/stream. func (s *CollectionFSSuite) TestMaxUnflushed(c *check.C) { nDirs := int64(8) maxUnflushed := (int64(concurrentWriters) + nDirs) << 26 fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) release := make(chan struct{}) timeout := make(chan struct{}) time.AfterFunc(10*time.Second, func() { close(timeout) }) var putCount, concurrency int64 var unflushed int64 s.kc.onWrite = func(p []byte) { defer atomic.AddInt64(&unflushed, -int64(len(p))) cur := atomic.AddInt64(&concurrency, 1) defer atomic.AddInt64(&concurrency, -1) pc := atomic.AddInt64(&putCount, 1) if pc < int64(concurrentWriters) { // Block until we reach concurrentWriters, to // make sure we're really accepting concurrent // writes. select { case <-release: case <-timeout: c.Error("timeout") } } else if pc == int64(concurrentWriters) { // Unblock the first N-1 PUT reqs. close(release) } c.Assert(cur <= int64(concurrentWriters), check.Equals, true) c.Assert(atomic.LoadInt64(&unflushed) <= maxUnflushed, check.Equals, true) } var owg sync.WaitGroup megabyte := make([]byte, 1<<20) for i := int64(0); i < nDirs; i++ { dir := fmt.Sprintf("dir%d", i) fs.Mkdir(dir, 0755) owg.Add(1) go func() { defer owg.Done() defer fs.Flush(dir, true) var iwg sync.WaitGroup defer iwg.Wait() for j := 0; j < 67; j++ { iwg.Add(1) go func(j int) { defer iwg.Done() f, err := fs.OpenFile(fmt.Sprintf("%s/file%d", dir, j), os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) defer f.Close() n, err := f.Write(megabyte) c.Assert(err, check.IsNil) atomic.AddInt64(&unflushed, int64(n)) fs.Flush(dir, false) }(j) } }() } owg.Wait() fs.Flush("", true) } func (s *CollectionFSSuite) TestFlushStress(c *check.C) { done := false defer func() { done = true }() time.AfterFunc(10*time.Second, func() { if !done { pprof.Lookup("goroutine").WriteTo(os.Stderr, 1) panic("timeout") } }) wrote := 0 s.kc.onWrite = func(p []byte) { s.kc.Lock() s.kc.blocks = map[string][]byte{} wrote++ defer c.Logf("wrote block %d, %d bytes", wrote, len(p)) s.kc.Unlock() time.Sleep(20 * time.Millisecond) } fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) data := make([]byte, 1<<20) for i := 0; i < 3; i++ { dir := fmt.Sprintf("dir%d", i) fs.Mkdir(dir, 0755) for j := 0; j < 200; j++ { data[0] = byte(j) f, err := fs.OpenFile(fmt.Sprintf("%s/file%d", dir, j), os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) _, err = f.Write(data) c.Assert(err, check.IsNil) f.Close() fs.Flush(dir, false) } _, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) } } func (s *CollectionFSSuite) TestFlushShort(c *check.C) { s.kc.onWrite = func([]byte) { s.kc.Lock() s.kc.blocks = map[string][]byte{} s.kc.Unlock() } fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) for _, blocksize := range []int{8, 1000000} { dir := fmt.Sprintf("dir%d", blocksize) err = fs.Mkdir(dir, 0755) c.Assert(err, check.IsNil) data := make([]byte, blocksize) for i := 0; i < 100; i++ { f, err := fs.OpenFile(fmt.Sprintf("%s/file%d", dir, i), os.O_WRONLY|os.O_CREATE, 0) c.Assert(err, check.IsNil) _, err = f.Write(data) c.Assert(err, check.IsNil) f.Close() fs.Flush(dir, false) } fs.Flush(dir, true) _, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) } } func (s *CollectionFSSuite) TestBrokenManifests(c *check.C) { for _, txt := range []string{ "\n", ".\n", ". \n", ". d41d8cd98f00b204e9800998ecf8427e+0\n", ". d41d8cd98f00b204e9800998ecf8427e+0 \n", ". 0:0:foo\n", ". 0:0:foo\n", ". 0:0:foo 0:0:bar\n", ". d41d8cd98f00b204e9800998ecf8427e 0:0:foo\n", ". d41d8cd98f00b204e9800998ecf8427e+0 :0:0:foo\n", ". d41d8cd98f00b204e9800998ecf8427e+0 foo:0:foo\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:foo:foo\n", ". d41d8cd98f00b204e9800998ecf8427e+1 0:1:foo 1:1:bar\n", ". d41d8cd98f00b204e9800998ecf8427e+1 0:1:\\056\n", ". d41d8cd98f00b204e9800998ecf8427e+1 0:1:\\056\\057\\056\n", ". d41d8cd98f00b204e9800998ecf8427e+1 0:1:.\n", ". d41d8cd98f00b204e9800998ecf8427e+1 0:1:..\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:..\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:foo/..\n", ". d41d8cd98f00b204e9800998ecf8427e+1 0:0:foo\n./foo d41d8cd98f00b204e9800998ecf8427e+1 0:0:bar\n", "./foo d41d8cd98f00b204e9800998ecf8427e+1 0:0:bar\n. d41d8cd98f00b204e9800998ecf8427e+1 0:0:foo\n", } { c.Logf("<-%q", txt) fs, err := (&Collection{ManifestText: txt}).FileSystem(s.client, s.kc) c.Check(fs, check.IsNil) c.Logf("-> %s", err) c.Check(err, check.NotNil) } } func (s *CollectionFSSuite) TestEdgeCaseManifests(c *check.C) { for _, txt := range []string{ "", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:foo\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:...\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:. 0:0:. 0:0:\\056 0:0:\\056\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:foo/. 0:0:. 0:0:foo\\057bar\\057\\056\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:foo 0:0:foo 0:0:bar\n", ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:foo/bar\n./foo d41d8cd98f00b204e9800998ecf8427e+0 0:0:bar\n", } { c.Logf("<-%q", txt) fs, err := (&Collection{ManifestText: txt}).FileSystem(s.client, s.kc) c.Check(err, check.IsNil) c.Check(fs, check.NotNil) } } var fakeLocator = func() []string { locs := make([]string, 10) for i := range locs { locs[i] = fmt.Sprintf("%x+%d", md5.Sum(make([]byte, i)), i) if i%2 == 1 { locs[i] += "+Awhatever+Zotherhints" } } return locs }() func (s *CollectionFSSuite) TestReplaceSegments_HappyPath(c *check.C) { fs, err := (&Collection{ ManifestText: ". " + fakeLocator[1] + " " + fakeLocator[2] + " 0:3:file3\n", }).FileSystem(nil, &keepClientStub{}) c.Assert(err, check.IsNil) changed, err := fs.ReplaceSegments(map[BlockSegment]BlockSegment{ BlockSegment{fakeLocator[1], 0, 1}: BlockSegment{fakeLocator[3], 0, 1}, BlockSegment{fakeLocator[2], 0, 2}: BlockSegment{fakeLocator[3], 1, 2}, }) c.Check(changed, check.Equals, true) c.Check(err, check.IsNil) mtxt, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Check(mtxt, check.Equals, ". "+fakeLocator[3]+" 0:3:file3\n") } func (s *CollectionFSSuite) TestReplaceSegments_InvalidOffset(c *check.C) { origtxt := ". " + fakeLocator[1] + " " + fakeLocator[2] + " 0:3:file3\n" fs, err := (&Collection{ ManifestText: origtxt, }).FileSystem(nil, &keepClientStub{}) c.Assert(err, check.IsNil) changed, err := fs.ReplaceSegments(map[BlockSegment]BlockSegment{ BlockSegment{fakeLocator[1], 0, 1}: BlockSegment{fakeLocator[3], 0, 1}, BlockSegment{fakeLocator[2], 0, 2}: BlockSegment{fakeLocator[3], 2, 2}, }) c.Check(changed, check.Equals, false) c.Check(err, check.ErrorMatches, `invalid replacement: offset 2 \+ length 2 > block size 3`) mtxt, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Check(mtxt, check.Equals, origtxt) } func (s *CollectionFSSuite) TestReplaceSegments_LengthMismatch(c *check.C) { origtxt := ". " + fakeLocator[1] + " " + fakeLocator[2] + " 0:3:file3\n" fs, err := (&Collection{ ManifestText: origtxt, }).FileSystem(nil, &keepClientStub{}) c.Assert(err, check.IsNil) changed, err := fs.ReplaceSegments(map[BlockSegment]BlockSegment{ BlockSegment{fakeLocator[1], 0, 1}: BlockSegment{fakeLocator[3], 0, 1}, BlockSegment{fakeLocator[2], 0, 2}: BlockSegment{fakeLocator[3], 0, 3}, }) c.Check(changed, check.Equals, false) c.Check(err, check.ErrorMatches, `mismatched length: replacing segment length 2 with segment length 3`) mtxt, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Check(mtxt, check.Equals, origtxt) } func (s *CollectionFSSuite) TestReplaceSegments_SkipUnreferenced(c *check.C) { fs, err := (&Collection{ ManifestText: ". " + fakeLocator[1] + " " + fakeLocator[2] + " " + fakeLocator[3] + " 0:6:file6\n", }).FileSystem(nil, &keepClientStub{}) c.Assert(err, check.IsNil) changed, err := fs.ReplaceSegments(map[BlockSegment]BlockSegment{ BlockSegment{fakeLocator[1], 0, 1}: BlockSegment{fakeLocator[4], 0, 1}, // skipped because [5] unref BlockSegment{fakeLocator[2], 0, 2}: BlockSegment{fakeLocator[4], 1, 2}, // skipped because [5] unref BlockSegment{fakeLocator[5], 0, 2}: BlockSegment{fakeLocator[4], 1, 2}, // [5] unreferenced in orig manifest BlockSegment{fakeLocator[3], 0, 3}: BlockSegment{fakeLocator[6], 3, 3}, // applied }) c.Check(changed, check.Equals, true) c.Check(err, check.IsNil) mtxt, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Check(mtxt, check.Equals, ". "+fakeLocator[1]+" "+fakeLocator[2]+" "+fakeLocator[6]+" 0:3:file6 6:3:file6\n") } func (s *CollectionFSSuite) TestReplaceSegments_SkipIncompleteSegment(c *check.C) { origtxt := ". " + fakeLocator[2] + " " + fakeLocator[3] + " 0:5:file5\n" fs, err := (&Collection{ ManifestText: origtxt, }).FileSystem(nil, &keepClientStub{}) c.Assert(err, check.IsNil) changed, err := fs.ReplaceSegments(map[BlockSegment]BlockSegment{ BlockSegment{fakeLocator[2], 0, 1}: BlockSegment{fakeLocator[4], 0, 1}, // length=1 does not match the length=2 segment }) c.Check(changed, check.Equals, false) c.Check(err, check.IsNil) mtxt, err := fs.MarshalManifest(".") c.Check(err, check.IsNil) c.Check(mtxt, check.Equals, origtxt) } func (s *CollectionFSSuite) TestSnapshotSplice(c *check.C) { filedata1 := "hello snapshot+splice world\n" fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) { f, err := fs.OpenFile("file1", os.O_CREATE|os.O_RDWR, 0700) c.Assert(err, check.IsNil) _, err = f.Write([]byte(filedata1)) c.Assert(err, check.IsNil) err = f.Close() c.Assert(err, check.IsNil) } snap, err := Snapshot(fs, "/") c.Assert(err, check.IsNil) err = Splice(fs, "dir1", snap) c.Assert(err, check.IsNil) f, err := fs.Open("dir1/file1") c.Assert(err, check.IsNil) buf, err := io.ReadAll(f) c.Assert(err, check.IsNil) c.Check(string(buf), check.Equals, filedata1) } func (s *CollectionFSSuite) TestRefreshSignatures(c *check.C) { filedata1 := "hello refresh signatures world\n" fs, err := (&Collection{}).FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) fs.Mkdir("d1", 0700) f, err := fs.OpenFile("d1/file1", os.O_CREATE|os.O_RDWR, 0700) c.Assert(err, check.IsNil) _, err = f.Write([]byte(filedata1)) c.Assert(err, check.IsNil) err = f.Close() c.Assert(err, check.IsNil) filedata2 := "hello refresh signatures universe\n" fs.Mkdir("d2", 0700) f, err = fs.OpenFile("d2/file2", os.O_CREATE|os.O_RDWR, 0700) c.Assert(err, check.IsNil) _, err = f.Write([]byte(filedata2)) c.Assert(err, check.IsNil) err = f.Close() c.Assert(err, check.IsNil) txt, err := fs.MarshalManifest(".") c.Assert(err, check.IsNil) var saved Collection err = s.client.RequestAndDecode(&saved, "POST", "arvados/v1/collections", nil, map[string]interface{}{ "select": []string{"manifest_text", "uuid", "portable_data_hash"}, "collection": map[string]interface{}{ "manifest_text": txt, }, }) c.Assert(err, check.IsNil) // Update signatures synchronously if they are already expired // when Read() is called. { saved.ManifestText = SignManifest(saved.ManifestText, s.kc.authToken, time.Now().Add(-2*time.Second), s.kc.sigttl, []byte(s.kc.sigkey)) fs, err := saved.FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f, err := fs.OpenFile("d1/file1", os.O_RDONLY, 0) c.Assert(err, check.IsNil) buf, err := ioutil.ReadAll(f) c.Check(err, check.IsNil) c.Check(string(buf), check.Equals, filedata1) } // Update signatures asynchronously if we're more than half // way to TTL when Read() is called. { exp := time.Now().Add(2 * time.Minute) saved.ManifestText = SignManifest(saved.ManifestText, s.kc.authToken, exp, s.kc.sigttl, []byte(s.kc.sigkey)) fs, err := saved.FileSystem(s.client, s.kc) c.Assert(err, check.IsNil) f1, err := fs.OpenFile("d1/file1", os.O_RDONLY, 0) c.Assert(err, check.IsNil) f2, err := fs.OpenFile("d2/file2", os.O_RDONLY, 0) c.Assert(err, check.IsNil) buf, err := ioutil.ReadAll(f1) c.Check(err, check.IsNil) c.Check(string(buf), check.Equals, filedata1) // Ensure fs treats the 2-minute TTL as less than half // the server's signing TTL. If we don't do this, // collectionfs will guess the signature is fresh, // i.e., signing TTL is 2 minutes, and won't do an // async refresh. fs.(*collectionFileSystem).guessSignatureTTL = time.Hour refreshed := false for deadline := time.Now().Add(time.Second * 10); time.Now().Before(deadline) && !refreshed; time.Sleep(time.Second / 10) { _, err = f1.Seek(0, io.SeekStart) c.Assert(err, check.IsNil) buf, err = ioutil.ReadAll(f1) c.Assert(err, check.IsNil) c.Assert(string(buf), check.Equals, filedata1) loc := s.kc.reads[len(s.kc.reads)-1] t, err := signatureExpiryTime(loc) c.Assert(err, check.IsNil) c.Logf("last read block %s had signature expiry time %v", loc, t) if t.Sub(time.Now()) > time.Hour { refreshed = true } } c.Check(refreshed, check.Equals, true) // Second locator should have been updated at the same // time. buf, err = ioutil.ReadAll(f2) c.Assert(err, check.IsNil) c.Assert(string(buf), check.Equals, filedata2) loc := s.kc.reads[len(s.kc.reads)-1] c.Check(loc, check.Not(check.Equals), s.kc.reads[len(s.kc.reads)-2]) t, err := signatureExpiryTime(s.kc.reads[len(s.kc.reads)-1]) c.Assert(err, check.IsNil) c.Logf("last read block %s had signature expiry time %v", loc, t) c.Check(t.Sub(time.Now()) > time.Hour, check.Equals, true) } } var bigmanifest = func() string { var buf bytes.Buffer for i := 0; i < 2000; i++ { fmt.Fprintf(&buf, "./dir%d", i) for i := 0; i < 100; i++ { fmt.Fprintf(&buf, " d41d8cd98f00b204e9800998ecf8427e+99999") } for i := 0; i < 2000; i++ { fmt.Fprintf(&buf, " 1200000:300000:file%d", i) } fmt.Fprintf(&buf, "\n") } return buf.String() }() func (s *CollectionFSSuite) BenchmarkParseManifest(c *check.C) { DebugLocksPanicMode = false c.Logf("test manifest is %d bytes", len(bigmanifest)) for i := 0; i < c.N; i++ { fs, err := (&Collection{ManifestText: bigmanifest}).FileSystem(s.client, s.kc) c.Check(err, check.IsNil) c.Check(fs, check.NotNil) } } func (s *CollectionFSSuite) checkMemSize(c *check.C, f File) { fn := f.(*filehandle).inode.(*filenode) var memsize int64 for _, seg := range fn.segments { if e, ok := seg.(*memSegment); ok { memsize += int64(len(e.buf)) } } c.Check(fn.memsize, check.Equals, memsize) } type CollectionFSUnitSuite struct{} var _ = check.Suite(&CollectionFSUnitSuite{}) // expect ~2 seconds to load a manifest with 256K files func (s *CollectionFSUnitSuite) TestLargeManifest_ManyFiles(c *check.C) { if testing.Short() { c.Skip("slow") } s.testLargeManifest(c, 512, 512, 1, 0) } func (s *CollectionFSUnitSuite) TestLargeManifest_LargeFiles(c *check.C) { if testing.Short() { c.Skip("slow") } s.testLargeManifest(c, 1, 800, 1000, 0) } func (s *CollectionFSUnitSuite) TestLargeManifest_InterleavedFiles(c *check.C) { if testing.Short() { c.Skip("slow") } // Timing figures here are from a dev host, (0)->(1)->(2)->(3) // (0) no optimizations (main branch commit ea697fb1e8) // (1) resolve streampos->blkidx with binary search // (2) ...and rewrite PortableDataHash() without regexp // (3) ...and use fnodeCache in loadManifest s.testLargeManifest(c, 1, 800, 100, 4<<20) // 127s -> 12s -> 2.5s -> 1.5s s.testLargeManifest(c, 1, 50, 1000, 4<<20) // 44s -> 10s -> 1.5s -> 0.8s s.testLargeManifest(c, 1, 200, 100, 4<<20) // 13s -> 4s -> 0.6s -> 0.3s s.testLargeManifest(c, 1, 200, 150, 4<<20) // 26s -> 4s -> 1s -> 0.5s s.testLargeManifest(c, 1, 200, 200, 4<<20) // 38s -> 6s -> 1.3s -> 0.7s s.testLargeManifest(c, 1, 200, 225, 4<<20) // 46s -> 7s -> 1.5s -> 1s s.testLargeManifest(c, 1, 400, 400, 4<<20) // 477s -> 24s -> 5s -> 3s // s.testLargeManifest(c, 1, 800, 1000, 4<<20) // timeout -> 186s -> 28s -> 17s } func (s *CollectionFSUnitSuite) testLargeManifest(c *check.C, dirCount, filesPerDir, blocksPerFile, interleaveChunk int) { t0 := time.Now() const blksize = 1 << 26 c.Logf("%s building manifest with dirCount=%d filesPerDir=%d blocksPerFile=%d", time.Now(), dirCount, filesPerDir, blocksPerFile) mb := bytes.NewBuffer(make([]byte, 0, 40000000)) blkid := 0 for i := 0; i < dirCount; i++ { fmt.Fprintf(mb, "./dir%d", i) for j := 0; j < filesPerDir; j++ { for k := 0; k < blocksPerFile; k++ { blkid++ fmt.Fprintf(mb, " %032x+%d+A%040x@%08x", blkid, blksize, blkid, blkid) } } for j := 0; j < filesPerDir; j++ { if interleaveChunk == 0 { fmt.Fprintf(mb, " %d:%d:dir%d/file%d", (filesPerDir-j-1)*blocksPerFile*blksize, blocksPerFile*blksize, j, j) continue } for todo := int64(blocksPerFile) * int64(blksize); todo > 0; todo -= int64(interleaveChunk) { size := int64(interleaveChunk) if size > todo { size = todo } offset := rand.Int63n(int64(blocksPerFile)*int64(blksize)*int64(filesPerDir) - size) fmt.Fprintf(mb, " %d:%d:dir%d/file%d", offset, size, j, j) } } mb.Write([]byte{'\n'}) } coll := Collection{ManifestText: mb.String()} c.Logf("%s built manifest size=%d", time.Now(), mb.Len()) var memstats runtime.MemStats runtime.ReadMemStats(&memstats) c.Logf("%s Alloc=%d Sys=%d", time.Now(), memstats.Alloc, memstats.Sys) f, err := coll.FileSystem(NewClientFromEnv(), &keepClientStub{}) c.Check(err, check.IsNil) c.Logf("%s loaded", time.Now()) c.Check(f.Size(), check.Equals, int64(dirCount*filesPerDir*blocksPerFile*blksize)) // Stat() and OpenFile() each file. This mimics the behavior // of webdav propfind, which opens each file even when just // listing directory entries. for i := 0; i < dirCount; i++ { for j := 0; j < filesPerDir; j++ { fnm := fmt.Sprintf("./dir%d/dir%d/file%d", i, j, j) fi, err := f.Stat(fnm) c.Assert(err, check.IsNil) c.Check(fi.IsDir(), check.Equals, false) f, err := f.OpenFile(fnm, os.O_RDONLY, 0) c.Assert(err, check.IsNil) f.Close() } } c.Logf("%s OpenFile() x %d", time.Now(), dirCount*filesPerDir) runtime.ReadMemStats(&memstats) c.Logf("%s Alloc=%d Sys=%d", time.Now(), memstats.Alloc, memstats.Sys) c.Logf("%s MemorySize=%d", time.Now(), f.MemorySize()) c.Logf("%s ... test duration %s", time.Now(), time.Now().Sub(t0)) } // Gocheck boilerplate func Test(t *testing.T) { check.TestingT(t) }