# baseurl is the location of the generated site from the browser's # perspective (e.g., http://doc.arvados.org or # file:///tmp/arvados/doc/.site). To make docs show up inside # workbench, use /doc here and add a symlink at # apps/workbench/public/doc pointing to ../../../doc/.site # You can also set these on the command line: # $ rake generate baseurl=/example arvados_api_host=example.comA baseurl: arvados_api_host: localhost arvados_workbench_host: localhost exclude: ["Rakefile", "tmp", "vendor"] navbar: userguide: - Getting Started: - user/index.html.textile.liquid - user/getting_started/workbench.html.textile.liquid - user/getting_started/ssh-access.html.textile.liquid - user/getting_started/check-environment.html.textile.liquid - user/getting_started/community.html.textile.liquid - Tutorials: - user/tutorials/tutorial-keep.html.textile.liquid - user/tutorials/intro-crunch.html.textile.liquid - user/tutorials/tutorial-pipeline-workbench.html.textile.liquid - user/tutorials/tutorial-firstscript.html.textile.liquid - user/tutorials/tutorial-new-pipeline.html.textile.liquid - user/tutorials/running-external-program.html.textile.liquid - Intermediate topics: - user/topics/running-pipeline-command-line.html.textile.liquid - user/topics/tutorial-job1.html.textile.liquid - user/topics/tutorial-job-debug.html.textile.liquid - user/topics/tutorial-parallel.html.textile.liquid - user/topics/tutorial-trait-search.html.textile.liquid - user/topics/tutorial-gatk-variantfiltration.html.textile.liquid - user/topics/keep.html.textile.liquid - Examples: - user/examples/crunch-examples.html.textile.liquid - Reference: - user/reference/api-tokens.html.textile.liquid - user/reference/sdk-cli.html.textile.liquid - Arvados License: - user/copying/copying.html.textile.liquid - user/copying/agpl-3.0.html - user/copying/LICENSE-2.0.html - user/copying/by-sa-3.0.html sdk: - Overview: - sdk/index.html.textile.liquid - Python: - sdk/python/sdk-python.html.textile.liquid - sdk/python/python.html.textile.liquid - sdk/python/crunch-utility-libraries.html.textile.liquid - Perl: - sdk/perl/index.html.textile.liquid - Ruby: - sdk/ruby/index.html.textile.liquid - Java: - sdk/java/index.html.textile.liquid - CLI: - sdk/cli/index.html.textile.liquid api: - Concepts: - api/index.html.textile.liquid - api/authentication.html.textile.liquid - api/methods.html.textile.liquid - api/resources.html.textile.liquid - api/crunch-scripts.html.textile.liquid - api/permission-model.html.textile.liquid - API Methods: - api/methods/api_client_authorizations.html.textile.liquid - api/methods/api_clients.html.textile.liquid - api/methods/authorized_keys.html.textile.liquid - api/methods/collections.html.textile.liquid - api/methods/groups.html.textile.liquid - api/methods/humans.html.textile.liquid - api/methods/jobs.html.textile.liquid - api/methods/job_tasks.html.textile.liquid - api/methods/keep_disks.html.textile.liquid - api/methods/links.html.textile.liquid - api/methods/logs.html.textile.liquid - api/methods/nodes.html.textile.liquid - api/methods/pipeline_instances.html.textile.liquid - api/methods/pipeline_templates.html.textile.liquid - api/methods/repositories.html.textile.liquid - api/methods/specimens.html.textile.liquid - api/methods/traits.html.textile.liquid - api/methods/users.html.textile.liquid - api/methods/virtual_machines.html.textile.liquid - Schema: - api/schema/ApiClientAuthorization.html.textile.liquid - api/schema/ApiClient.html.textile.liquid - api/schema/AuthorizedKey.html.textile.liquid - api/schema/Collection.html.textile.liquid - api/schema/Group.html.textile.liquid - api/schema/Human.html.textile.liquid - api/schema/Job.html.textile.liquid - api/schema/JobTask.html.textile.liquid - api/schema/KeepDisk.html.textile.liquid - api/schema/Link.html.textile.liquid - api/schema/Log.html.textile.liquid - api/schema/Node.html.textile.liquid - api/schema/PipelineInstance.html.textile.liquid - api/schema/PipelineTemplate.html.textile.liquid - api/schema/Repository.html.textile.liquid - api/schema/Specimen.html.textile.liquid - api/schema/Trait.html.textile.liquid - api/schema/User.html.textile.liquid - api/schema/VirtualMachine.html.textile.liquid admin: - Admin: - admin/index.html.md.liquid - admin/cheat_sheet.html.textile.liquid installguide: - Install: - install/index.html.textile.liquid - install/install-sso.html.textile.liquid - install/install-api-server.html.textile.liquid - install/install-workbench-app.html.textile.liquid - install/create-standard-objects.html.textile.liquid - install/install-crunch-dispatch.html.textile.liquid