<% if current_obj.uuid.nil? %> No <%= current_obj.title %> has been submitted yet. <% else %> <% keys = [:uuid, :modified_by_user_uuid, :created_at, :started_at, :finished_at, :container_uuid] %> <% keys << :log_collection if @object.uuid != current_obj.uuid %> <% keys << :outputs %> <% keys.each do |k| %> <% val = current_obj.send(k) if current_obj.respond_to?(k) if k == :outputs has_val = val.andand.any? elsif k == :log_collection and current_obj.state_label == "Running" has_val = true else has_val = val end %> <% if has_val %> <% end %> <% end %>

<%= k.to_s %>:

<% if k == :uuid %> <%= link_to_arvados_object_if_readable(val, val, link_text: val) %> <% elsif k.to_s.end_with? 'uuid' %> <%= link_to_arvados_object_if_readable(val, val, friendly_name: true) %> <% elsif k.to_s.end_with? '_at' %> <%= render_localized_date(val) %> <% elsif k == :outputs and val.any? %> <% if val.size == 1 %> <%= link_to_arvados_object_if_readable(val[0], 'Output data not available', friendly_name: true) %> <% else %> <%= render partial: 'work_units/show_outputs', locals: {id: current_obj.uuid, outputs: val, align:""} %> <% end %> <% elsif k == :log_collection %> <%= render partial: 'work_units/show_log_link', locals: {wu: current_obj} %> <% else %> <%= val %> <% end %>

<% end %>

<% # link to repo tree/file only if the repo is readable and the commit is a sha1 repo = (/^[0-9a-f]{40}$/ =~ current_obj.script_version and current_obj.repository and object_for_dataclass(Repository, current_obj.repository, :name)) repo = nil unless repo.andand.http_fetch_url %> <% [:priority, :script, :repository, :script_version, :supplied_script_version, :nondeterministic, :runtime_constraints, :requesting_container_uuid].each do |k| %> <% val = current_obj.send(k) if current_obj.respond_to?(k) %> <% if val %> <% end %> <% end %> <% mounts = current_obj.send(:mounts) if current_obj.respond_to?(:mounts) mount_wf = mounts.andand[:"/var/lib/cwl/workflow.json"] mount_wf = mount_wf[5..-1] if mount_wf.andand.is_a?(String) and mount_wf.start_with?('keep:') mount_wf_cls = resource_class_for_uuid(mount_wf) if mount_wf %> <% if mount_wf_cls == Collection %> <% end %> <% if current_obj.runtime_constraints.andand[:docker_image] and current_obj.docker_image %> <% elsif current_obj.docker_image %> <% end %>

<%= k.to_s %>:	<% if repo and k == :repository %> <%= link_to val, show_repository_tree_path(id: repo.uuid, commit: current_obj.script_version, path: '/') %> <% elsif repo and k == :script %> <%= link_to val, show_repository_blob_path(id: repo.uuid, commit: current_obj.script_version, path: 'crunch_scripts/'+current_obj.script) %> <% elsif repo and k == :script_version %> <%= link_to val, show_repository_commit_path(id: repo.uuid, commit: current_obj.script_version) %> <% elsif k == :runtime_constraints and val.any? %> <%= render partial: 'work_units/show_table_data', locals: {id: current_obj.uuid, name: k, data_map: val} %> <% elsif k.to_s.end_with? 'uuid' %> <%= link_to_arvados_object_if_readable(val, val, friendly_name: true) %> <% else %> <%= val %> <% end %>
workflow.json:	<%= link_to_if_arvados_object mount_wf, friendly_name: true %>
docker_image:	<%= current_obj.runtime_constraints[:docker_image] %>
docker_image_locator:	<%= link_to_arvados_object_if_readable(current_obj.docker_image, current_obj.docker_image, friendly_name: true) %>
docker_image_locator:	<%= link_to_arvados_object_if_readable(current_obj.docker_image, current_obj.docker_image, friendly_name: true) %>

<% [:command].each do |k| %> <% val = current_obj.send(k) if current_obj.respond_to?(k) %> <% if val %> <% end %> <% end %> <% mounts = current_obj.send(:mounts) if current_obj.respond_to?(:mounts) input_obj = mounts.andand[:"/var/lib/cwl/cwl.input.json"].andand[:content] mnt_inputs = JSON.pretty_generate(input_obj) if input_obj %> <% if mnt_inputs %> <% end %>

<%= k.to_s %>:	<% if k == :command %> <%=val%> <% else %> <%= val %> <% end %>
cwl.input.json:	<% mnt_inputs.each_line do |l| %> <% text_part = l %> <% match = l.match /(.*)(\"keep:.*?\")/ %> <% if match and match.size == 3 %> <% text_part = match[1] %> <% loc_part = match[2][6..-2] %> <% end %> <%= text_part %><%= if loc_part then link_to_arvados_object_if_readable(loc_part, loc_part, friendly_name: true) end %> <% if loc_part then %> <% end %> <% end %>

script_parameters:

<%= JSON.pretty_generate(current_obj.parameters) rescue nil %>