queued: uuid: zzzzz-xvhdp-cr4queuedcontnr owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: queued state: Committed priority: 1 created_at: <%= 2.minute.ago.to_s(:db) %> updated_at: <%= 1.minute.ago.to_s(:db) %> modified_at: <%= 1.minute.ago.to_s(:db) %> modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-queuedcontainer runtime_constraints: vcpus: 1 ram: 123 running: uuid: zzzzz-xvhdp-cr4runningcntnr owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: running state: Committed priority: 1 created_at: <%= 2.minute.ago.to_s(:db) %> updated_at: <%= 1.minute.ago.to_s(:db) %> modified_at: <%= 1.minute.ago.to_s(:db) %> modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-runningcontainr runtime_constraints: vcpus: 1 ram: 123 requester_for_running: uuid: zzzzz-xvhdp-req4runningcntr owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: requester_for_running_cr state: Committed priority: 1 created_at: <%= 2.minute.ago.to_s(:db) %> updated_at: <%= 2.minute.ago.to_s(:db) %> modified_at: <%= 2.minute.ago.to_s(:db) %> modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-logscontainer03 requesting_container_uuid: zzzzz-dz642-runningcontainr runtime_constraints: vcpus: 1 ram: 123 running_older: uuid: zzzzz-xvhdp-cr4runningcntn2 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: running state: Committed priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-12 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-runningcontain2 runtime_constraints: vcpus: 1 ram: 123 completed: uuid: zzzzz-xvhdp-cr4completedctr owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: completed container request state: Final priority: 1 created_at: <%= 2.minute.ago.to_s(:db) %> updated_at: <%= 1.minute.ago.to_s(:db) %> modified_at: <%= 1.minute.ago.to_s(:db) %> modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-compltcontainer log_uuid: zzzzz-4zz18-y9vne9npefyxh8g output_uuid: zzzzz-4zz18-znfnqtbbv4spc3w runtime_constraints: vcpus: 1 ram: 123 completed-older: uuid: zzzzz-xvhdp-cr4completedcr2 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: completed state: Final priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["arvados-cwl-runner", "echo", "hello"] container_uuid: zzzzz-dz642-compltcontainr2 runtime_constraints: vcpus: 1 ram: 123 requester: uuid: zzzzz-xvhdp-9zacv3o1xw6sxz5 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: requester state: Committed priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: / output_path: /output command: ["request-another-container", "echo", "hello"] container_uuid: zzzzz-dz642-requestingcntnr runtime_constraints: vcpus: 1 ram: 123 cr_for_requester: uuid: zzzzz-xvhdp-cr4requestercnt owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: requester_cr state: Final priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-requestercntnr1 requesting_container_uuid: zzzzz-dz642-requestingcntnr runtime_constraints: vcpus: 1 ram: 123 cr_for_requester2: uuid: zzzzz-xvhdp-cr4requestercn2 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: requester_cr2 state: Final priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] requesting_container_uuid: zzzzz-dz642-requestercntnr1 runtime_constraints: vcpus: 1 ram: 123 running_anonymous_accessible: uuid: zzzzz-xvhdp-runninganonaccs owner_uuid: zzzzz-j7d0g-zhxawtyetzwc5f0 name: running anonymously accessible cr state: Committed priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-runningcontain2 runtime_constraints: vcpus: 1 ram: 123 cr_for_failed: uuid: zzzzz-xvhdp-cr4failedcontnr owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: cr for container exit code not 0 state: Committed priority: 1 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-failedcontainr1 runtime_constraints: vcpus: 1 ram: 123 canceled_with_queued_container: uuid: zzzzz-xvhdp-canceledqueuedc owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: canceled with queued container state: Committed priority: 0 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-queuedcontainer runtime_constraints: vcpus: 1 ram: 123 canceled_with_locked_container: uuid: zzzzz-xvhdp-canceledlocekdc owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: canceled with locked container state: Committed priority: 0 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-lockedcontainer runtime_constraints: vcpus: 1 ram: 123 canceled_with_running_container: uuid: zzzzz-xvhdp-canceledrunning owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: canceled with running container state: Committed priority: 0 created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] container_uuid: zzzzz-dz642-runningcontainr runtime_constraints: vcpus: 1 ram: 123 completed_with_input_mounts: uuid: zzzzz-xvhdp-crwithinputmnts owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: completed container request state: Final priority: 1 created_at: <%= 24.hour.ago.to_s(:db) %> updated_at: <%= 24.hour.ago.to_s(:db) %> modified_at: <%= 24.hour.ago.to_s(:db) %> modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz container_image: test cwd: test output_path: test command: ["echo", "hello"] runtime_constraints: vcpus: 1 ram: 123 container_uuid: zzzzz-dz642-compltcontainer log_uuid: zzzzz-4zz18-y9vne9npefyxh8g output_uuid: zzzzz-4zz18-znfnqtbbv4spc3w mounts: /var/lib/cwl/cwl.input.json: content: input1: basename: foo class: File location: "keep:fa7aeb5140e2848d39b416daeef4ffc5+45/foo" input2: basename: bar class: File location: "keep:fa7aeb5140e2848d39b416daeef4ffc5+45/bar" /var/lib/cwl/workflow.json: "keep:1fd08fc162a5c6413070a8bd0bffc818+150" uncommitted: uuid: zzzzz-xvhdp-cr4uncommittedc owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: uncommitted created_at: <%= 2.minute.ago.to_s(:db) %> updated_at: <%= 1.minute.ago.to_s(:db) %> modified_at: <%= 1.minute.ago.to_s(:db) %> modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz command: ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"] output_path: "/var/spool/cwl" cwd: "/var/spool/cwl" priority: 1 state: "Uncommitted" container_image: arvados/jobs mounts: { "/var/lib/cwl/workflow.json": { "kind": "json", "content": { "cwlVersion": "v1.0", "$graph": [{ "id": "#main", "class": "CommandLineTool", "baseCommand": ["echo"], "inputs": [ { "doc": "a longer documentation string for this parameter (optional)", "type": "boolean", "id": "ex_boolean", "label": "a short label for this parameter (optional)", "inputBinding": {"position": 1} }, { "type": ["null", "boolean"], "id": "ex_boolean_opt", "inputBinding": {"position": 1} }, { "doc": "directory selection should present the workbench collection picker", "type": "Directory", "id": "ex_dir", "inputBinding": {"position": 1} }, { "type": "double", "id": "ex_double", "inputBinding": {"position": 1} }, { "doc": "file selection should present the workbench file picker", "type": "File", "id": "ex_file", "inputBinding": {"position": 1} }, { "type": "float", "id": "ex_float", "inputBinding": {"position": 1} }, { "type": "int", "id": "ex_int", "inputBinding": {"position": 1} }, { "type": ["null", "int"], "id": "ex_int_opt", "inputBinding": {"position": 1} }, { "type": "long", "id": "ex_long", "inputBinding": {"position": 1} }, { "type": "string", "id": "ex_string", "inputBinding": {"position": 1} }, { "type": ["null", "string"], "id": "ex_string_opt", "inputBinding": {"position": 1} }, { "type": { "type": "enum", "symbols": ["a", "b", "c"] }, "id": "ex_enum", "inputBinding": {"position": 1} }, { "type": ["null", { "type": "enum", "symbols": ["a", "b", "c"] }], "id": "ex_enum_opt", "inputBinding": {"position": 1} } ], "outputs": [] }] } }, "/var/lib/cwl/cwl.input.json": { "kind": "json", "content": {} }, "stdout": { "kind": "file", "path": "/var/spool/cwl/cwl.output.json" }, "/var/spool/cwl": { "kind": "collection", "writable": true } } runtime_constraints: vcpus: 1 ram: 256000000 API: true uncommitted_ready_to_run: uuid: zzzzz-xvhdp-cr4uncommittedd owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: uncommitted_ready_to_run created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz command: ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"] output_path: "/var/spool/cwl" cwd: "/var/spool/cwl" priority: 1 state: "Uncommitted" container_image: arvados/jobs mounts: { "/var/lib/cwl/workflow.json": { "kind": "json", "content": { "cwlVersion": "v1.0", "class": "CommandLineTool", "baseCommand": ["echo"], "inputs": [ { "doc": "a longer documentation string for this parameter (optional)", "type": "boolean", "id": "ex_boolean", "label": "a short label for this parameter (optional)", "inputBinding": {"position": 1} }, { "type": ["null", "boolean"], "id": "ex_boolean_opt", "inputBinding": {"position": 1} }, { "doc": "directory selection should present the workbench collection picker", "type": "Directory", "id": "ex_dir", "inputBinding": {"position": 1} }, { "type": "double", "id": "ex_double", "inputBinding": {"position": 1} }, { "doc": "file selection should present the workbench file picker", "type": "File", "id": "ex_file", "inputBinding": {"position": 1} }, { "type": "float", "id": "ex_float", "inputBinding": {"position": 1} }, { "type": "int", "id": "ex_int", "inputBinding": {"position": 1} }, { "type": ["null", "int"], "id": "ex_int_opt", "inputBinding": {"position": 1} }, { "type": "long", "id": "ex_long", "inputBinding": {"position": 1} }, { "type": "string", "id": "ex_string", "inputBinding": {"position": 1} }, { "type": ["null", "string"], "id": "ex_string_opt", "inputBinding": {"position": 1} }, { "type": { "type": "enum", "symbols": ["a", "b", "c"] }, "id": "ex_enum", "inputBinding": {"position": 1} }, { "type": ["null", { "type": "enum", "symbols": ["a", "b", "c"] }], "id": "ex_enum_opt", "inputBinding": {"position": 1} } ], "outputs": [] } }, "/var/lib/cwl/cwl.input.json": { "kind": "json", "content": { "ex_string_opt": null, "ex_int_opt": null, "ex_boolean": false, "ex_boolean_opt": true, "ex_dir": { "class": "Directory", "location": "keep:1f4b0bc7583c2a7f9102c395f4ffc5e3+45", "arv:collection": "zzzzz-4zz18-znfnqtbbv4spc3w" }, "ex_double": 66.0, "ex_file": { "class": "File", "location": "keep:1f4b0bc7583c2a7f9102c395f4ffc5e3+45/foo", "arv:collection": "zzzzz-4zz18-znfnqtbbv4spc3w/foo" }, "ex_float": 55.0, "ex_int": 55, "ex_long": 22, "ex_string": "qq", "ex_enum": "a" } }, "stdout": { "kind": "file", "path": "/var/spool/cwl/cwl.output.json" }, "/var/spool/cwl": { "kind": "collection", "writable": true } } runtime_constraints: vcpus: 1 ram: 256000000 API: true uncommitted-with-directory-input: uuid: zzzzz-xvhdp-cr4uncommitted2 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: uncommitted with directory input created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz command: ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"] output_path: "/var/spool/cwl" cwd: "/var/spool/cwl" priority: 1 state: Uncommitted container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167 mounts: { "/var/lib/cwl/workflow.json": { "kind": "json", "content": { "cwlVersion": "v1.0", "class": "CommandLineTool", "baseCommand": ["echo"], "inputs": [ { "type": "Directory", "id": "directory_type", "inputBinding": {"position": 1} } ], "outputs": [] } }, "/var/lib/cwl/cwl.input.json": { "kind": "json", "content": {} }, "stdout": { "kind": "file", "path": "/var/spool/cwl/cwl.output.json" }, "/var/spool/cwl": { "kind": "collection", "writable": true } } runtime_constraints: vcpus: 1 ram: 256000000 API: true uncommitted-with-file-input: uuid: zzzzz-xvhdp-cr4uncommittedf owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: uncommitted with directory input created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz command: ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"] output_path: "/var/spool/cwl" cwd: "/var/spool/cwl" priority: 1 state: Uncommitted container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167 mounts: { "/var/lib/cwl/workflow.json": { "kind": "json", "content": { "cwlVersion": "v1.0", "class": "CommandLineTool", "baseCommand": ["echo"], "inputs": [ { "type": "File", "id": "file_type", "inputBinding": {"position": 1} } ], "outputs": [] } }, "/var/lib/cwl/cwl.input.json": { "kind": "json", "content": {} }, "stdout": { "kind": "file", "path": "/var/spool/cwl/cwl.output.json" }, "/var/spool/cwl": { "kind": "collection", "writable": true } } runtime_constraints: vcpus: 1 ram: 256000000 API: true uncommitted-with-required-and-optional-inputs: uuid: zzzzz-xvhdp-cr4uncommitted3 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz name: uncommitted with required and optional inputs created_at: 2016-01-11 11:11:11.111111111 Z updated_at: 2016-01-11 11:11:11.111111111 Z modified_at: 2016-01-11 11:11:11.111111111 Z modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz command: ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"] output_path: "/var/spool/cwl" cwd: "/var/spool/cwl" priority: 1 state: Uncommitted container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167 mounts: { "/var/lib/cwl/workflow.json": { "kind": "json", "content": { "cwlVersion": "v1.0", "class": "CommandLineTool", "baseCommand": ["echo"], "inputs": [ { "type": "int", "id": "int_required", "inputBinding": {"position": 1} }, { "type": ["null", "int"], "id": "int_optional", "inputBinding": {"position": 1} } ], "outputs": [] } }, "/var/lib/cwl/cwl.input.json": { "kind": "json", "content": {} }, "stdout": { "kind": "file", "path": "/var/spool/cwl/cwl.output.json" }, "/var/spool/cwl": { "kind": "collection", "writable": true } } runtime_constraints: vcpus: 1 ram: 256000000 API: true # Test Helper trims the rest of the file # Do not add your fixtures below this line as the rest of this file will be trimmed by test_helper # container requests in project_with_2_pipelines_and_60_crs <% for i in 1..60 do %> cr_<%=i%>_of_60: uuid: zzzzz-xvhdp-oneof60crs<%= i.to_s.rjust(5, '0') %> created_at: <%= ((i+5)/5).hour.ago.to_s(:db) %> owner_uuid: zzzzz-j7d0g-nnncrspipelines name: cr-<%= i.to_s %> output_path: test command: ["echo", "hello"] <% end %> # Do not add your fixtures below this line as the rest of this file will be trimmed by test_helper