#!/usr/bin/env ruby # Arvados cli client # # Ward Vandewege if RUBY_VERSION < '1.9.3' then abort <<-EOS #{$0.gsub(/^\.\//,'')} requires Ruby version 1.9.3 or higher. EOS end if ARGV[0] == 'keep' ARGV.shift @sub = ARGV.shift if @sub == 'ls' or @sub == 'get' or @sub == 'put' or @sub == 'less' then exec(`which wh#{@sub}`.strip + ' ' + ARGV.join(' ')) else puts "Usage: \n" + "#{$0} keep ls\n" + "#{$0} keep get\n" + "#{$0} keep put\n" + "#{$0} keep less\n" end exit end ENV['ARVADOS_API_VERSION'] ||= 'v1' if not ENV.include?('ARVADOS_API_HOST') or not ENV.include?('ARVADOS_API_TOKEN') then abort <<-EOS ARVADOS_API_HOST and ARVADOS_API_TOKEN need to be defined as environment variables. EOS end begin require 'rubygems' require 'google/api_client' require 'json' require 'pp' require 'trollop' require 'andand' require 'oj' require 'active_support/inflector' rescue LoadError abort <<-EOS Please install all required gems: gem install google-api-client json trollop andand oj activesupport EOS end ActiveSupport::Inflector.inflections do |inflect| inflect.irregular 'specimen', 'specimens' inflect.irregular 'human', 'humans' end module Kernel def suppress_warnings original_verbosity = $VERBOSE $VERBOSE = nil result = yield $VERBOSE = original_verbosity return result end end # do this if you're testing with a dev server and you don't care about SSL certificate checks: if ENV['ARVADOS_API_HOST_INSECURE'] suppress_warnings { OpenSSL::SSL::VERIFY_PEER = OpenSSL::SSL::VERIFY_NONE } end class Google::APIClient def discovery_document(api, version) api = api.to_s return @discovery_documents["#{api}:#{version}"] ||= (begin response = self.execute!( :http_method => :get, :uri => self.discovery_uri(api, version), :authenticated => false ) response.body.class == String ? JSON.parse(response.body) : response.body end) end end client = Google::APIClient.new(:host => ENV['ARVADOS_API_HOST'], :application_name => 'arvados-cli', :application_version => '1.0') arvados = client.discovered_api('arvados', ENV['ARVADOS_API_VERSION']) def to_boolean(s) !!(s =~ /^(true|t|yes|y|1)$/i) end def parse_arguments(discovery_document) resource_types = Array.new() resource_types << '--help' discovery_document["resources"].each do |k,v| resource_types << k.singularize end global_opts = Trollop::options do banner "arvados cli client" opt :dry_run, "Don't actually do anything", :short => "-n" opt :verbose, "Print some things on stderr", :short => "-v" opt :uuid, "Return the UUIDs of the objects in the response, one per line (default)", :short => nil opt :json, "Return the entire response received from the API server, as a JSON object", :short => "-j" opt :human, "Return the response received from the API server, as a JSON object with whitespace added for human consumption", :short => "-h" opt :pretty, "Synonym of --human", :short => nil stop_on resource_types end # get the subcommand resource_arg = ARGV.shift if resource_types.include?(resource_arg) and resource_arg != '--help' then # subcommand exists # Now see if the method supplied exists method = ARGV.shift if discovery_document["resources"][resource_arg.pluralize]["methods"].include?(method) then # method exists. Collect arguments. discovered_params = discovery_document["resources"][resource_arg.pluralize]["methods"][method]["parameters"] method_opts = Trollop::options do discovered_params.each do |k,v| opts = Hash.new() opts[:type] = v["type"].to_sym if v.include?("type") if [:datetime, :text, :object].index opts[:type] opts[:type] = :string # else trollop bork end opts[:default] = v["default"] if v.include?("default") opts[:default] = v["default"].to_i if opts[:type] == :integer opts[:default] = to_boolean(v["default"]) if opts[:type] == :boolean opts[:required] = true if v.include?("required") and v["required"] description = '' description = ' ' + v["description"] if v.include?("description") opt k.to_sym, description, opts end end discovered_params.each do |k,v| if v["type"] == "object" and method_opts.has_key? k method_opts[k] = JSON.parse method_opts[k] end end else banner = "\nThis resource type supports the following methods:\n\n" discovery_document["resources"][resource_arg.pluralize]["methods"].each do |k,v| description = '' description = ' ' + v["description"] if v.include?("description") banner += " #{sprintf("%20s",k)}#{description}\n" end banner += "\n" STDERR.puts banner if not method.nil? and method != '--help' then Trollop::die "Unknown method #{method.to_s} for command #{resource_arg.to_s}" else exit 255 end end else banner = "\nThis Arvados instance supports the following resource types:\n\n" discovery_document["resources"].each do |k,v| description = '' if discovery_document["schemas"].include?(k.singularize.capitalize) and discovery_document["schemas"][k.singularize.capitalize].include?('description') then description = ' ' + discovery_document["schemas"][k.singularize.capitalize]["description"] end banner += " #{sprintf("%30s",k.singularize)}#{description}\n" end banner += "\n" STDERR.puts banner if not resource_arg.nil? and resource_arg != '--help' then Trollop::die "Unknown resource type #{resource_arg.inspect}" else exit 255 end end return resource_arg.pluralize, method, method_opts, global_opts, ARGV end controller, method, method_opts, global_opts, remaining_opts = parse_arguments(arvados.discovery_document) api_method = 'arvados.' + controller + '.' + method if global_opts[:dry_run] if global_opts[:verbose] $stderr.puts "#{api_method} #{method_opts.inspect}" end exit end result = client.execute :api_method => eval(api_method), :parameters => { :api_token => ENV['ARVADOS_API_TOKEN'] }.merge(method_opts), :authenticated => false results = JSON.parse result.body if results["errors"] then abort "Error: #{results["errors"][0]}" end if global_opts[:human] or global_opts[:pretty] then puts Oj.dump(results, :indent => 1) elsif global_opts[:json] then puts Oj.dump(results) elsif results["items"] and results["kind"].match /list$/i results['items'].each do |i| puts i['uuid'] end else puts results['uuid'] end