<% content_for :head do %> <% end %> <% if current_user.andand.is_active %>

Account summary

<% [Human, Trait, Collection, 'File', PipelineTemplate, PipelineInstance].each do |aclass| %>
<% if aclass == 'File' %> <%= Collection.limit(4000).where({}).collect(&:files).flatten(1).count %> <% else %> <%= aclass.limit(4000).where({}).count %> <% end %>
<%= raw(aclass.to_s.pluralize.underscore.gsub '_', ' ') %>
<% end %>
<% end %>
<% if not current_user.andand.is_active %> <%= render partial: 'request_activation' %> <% else %>

Configuration

<% end %>

Quick links

  • <%= link_to "Introduction to Arvados", "https://arvados.org/projects/arvados/wiki/Introduction_to_Arvados" %>
  • <%= link_to "API Reference", "http://doc.arvados.org/api/" %>
  • <%= link_to "User Guide", "http://doc.arvados.org/api/" %>
  • <%= link_to "Tutorial 1: Your first job", "http://doc.arvados.org/user/tutorial-job1.html" %>
  • <%= link_to "Tutorial 2: GATK VariantFiltration", "http://doc.arvados.org/user/tutorial-gatk-variantfiltration.html" %>
  • <%= link_to "Tutorial 3: Search PGP data by trait", "http://doc.arvados.org/user/tutorial-trait-search.html" %>
  • <%= link_to "Tutorial 4: Create a new pipeline", "http://doc.arvados.org/user/tutorial-new-pipeline.html" %>

Recent jobs

<% if not current_user.andand.is_active or @my_jobs.empty? %> (None) <% else %> <% @my_jobs[0..8].each do |j| %> <% end %>
<%= link_to j.script[0..31], job_path(j.uuid) %> <%= j.script_version[0..7] %> <%= j.script_parameters.andand[:input].andand.to_s.andand[0..7] %> <% if j.success %> finished <% elsif j.success == false %> failed <% elsif j.running and j.started_at and not j.finished_at %> <% percent_total_tasks = 100 / (j.tasks_summary[:running] + j.tasks_summary[:done] + j.tasks_summary[:todo]) rescue 0 %>
<% else %> queued <% end %>
<%= link_to raw("Show more jobs / details →"), jobs_path, class: 'pull-right' %> <% end %>