# Copyright (C) The Arvados Authors. All rights reserved. # # SPDX-License-Identifier: AGPL-3.0 # Do not use this file for site configuration. Create # /etc/arvados/config.yml instead. # # The order of precedence (highest to lowest): # 1. Legacy component-specific config files (deprecated) # 2. /etc/arvados/config.yml # 3. config.default.yml Clusters: xxxxx: SystemRootToken: "" # Token to be included in all healthcheck requests. Disabled by default. # Server expects request header of the format "Authorization: Bearer xxx" ManagementToken: "" Services: # In each of the service sections below, the keys under # InternalURLs are the endpoints where the service should be # listening, and reachable from other hosts in the cluster. SAMPLE: InternalURLs: "http://host1.example:12345": {} "http://host2.example:12345": # Rendezvous is normally empty/omitted. When changing the # URL of a Keepstore service, Rendezvous should be set to # the old URL (with trailing slash omitted) to preserve # rendezvous ordering. Rendezvous: "" SAMPLE: Rendezvous: "" ExternalURL: "-" RailsAPI: InternalURLs: {} ExternalURL: "-" Controller: InternalURLs: {} ExternalURL: "" Websocket: InternalURLs: {} ExternalURL: "" Keepbalance: InternalURLs: {} ExternalURL: "-" GitHTTP: InternalURLs: {} ExternalURL: "" GitSSH: InternalURLs: {} ExternalURL: "" DispatchCloud: InternalURLs: {} ExternalURL: "-" SSO: InternalURLs: {} ExternalURL: "" Keepproxy: InternalURLs: {} ExternalURL: "" WebDAV: InternalURLs: {} # Base URL for Workbench inline preview. If blank, use # WebDAVDownload instead, and disable inline preview. # If both are empty, downloading collections from workbench # will be impossible. # # It is important to properly configure the download service # to migitate cross-site-scripting (XSS) attacks. A HTML page # can be stored in collection. If an attacker causes a victim # to visit that page through Workbench, it will be rendered by # the browser. If all collections are served at the same # domain, the browser will consider collections as coming from # the same origin and having access to the same browsing data, # enabling malicious Javascript on that page to access Arvados # on behalf of the victim. # # This is mitigating by having separate domains for each # collection, or limiting preview to circumstances where the # collection is not accessed with the user's regular # full-access token. # # Serve preview links using uuid or pdh in subdomain # (requires wildcard DNS and TLS certificate) # https://*.collections.uuid_prefix.arvadosapi.com # # Serve preview links using uuid or pdh in main domain # (requires wildcard DNS and TLS certificate) # https://*--collections.uuid_prefix.arvadosapi.com # # Serve preview links by setting uuid or pdh in the path. # This configuration only allows previews of public data or # collection-sharing links, because these use the anonymous # user token or the token is already embedded in the URL. # Other data must be handled as downloads via WebDAVDownload: # https://collections.uuid_prefix.arvadosapi.com # ExternalURL: "" WebDAVDownload: InternalURLs: {} # Base URL for download links. If blank, serve links to WebDAV # with disposition=attachment query param. Unlike preview links, # browsers do not render attachments, so there is no risk of XSS. # # If WebDAVDownload is blank, and WebDAV uses a # single-origin form, then Workbench will show an error page # # Serve download links by setting uuid or pdh in the path: # https://download.uuid_prefix.arvadosapi.com # ExternalURL: "" Keepstore: InternalURLs: {} ExternalURL: "-" Composer: InternalURLs: {} ExternalURL: "" WebShell: InternalURLs: {} # ShellInABox service endpoint URL for a given VM. If empty, do not # offer web shell logins. # # E.g., using a path-based proxy server to forward connections to shell hosts: # https://webshell.uuid_prefix.arvadosapi.com # # E.g., using a name-based proxy server to forward connections to shell hosts: # https://*.webshell.uuid_prefix.arvadosapi.com ExternalURL: "" Workbench1: InternalURLs: {} ExternalURL: "" Workbench2: InternalURLs: {} ExternalURL: "" Nodemanager: InternalURLs: {} ExternalURL: "-" Health: InternalURLs: {} ExternalURL: "-" PostgreSQL: # max concurrent connections per arvados server daemon ConnectionPool: 32 Connection: # All parameters here are passed to the PG client library in a connection string; # see https://www.postgresql.org/docs/current/static/libpq-connect.html#LIBPQ-PARAMKEYWORDS host: "" port: "" user: "" password: "" dbname: "" SAMPLE: "" API: # Maximum size (in bytes) allowed for a single API request. This # limit is published in the discovery document for use by clients. # Note: You must separately configure the upstream web server or # proxy to actually enforce the desired maximum request size on the # server side. MaxRequestSize: 134217728 # Limit the number of bytes read from the database during an index # request (by retrieving and returning fewer rows than would # normally be returned in a single response). # Note 1: This setting never reduces the number of returned rows to # zero, no matter how big the first data row is. # Note 2: Currently, this is only checked against a specific set of # columns that tend to get large (collections.manifest_text, # containers.mounts, workflows.definition). Other fields (e.g., # "properties" hashes) are not counted against this limit. MaxIndexDatabaseRead: 134217728 # Maximum number of items to return when responding to a APIs that # can return partial result sets using limit and offset parameters # (e.g., *.index, groups.contents). If a request specifies a "limit" # parameter higher than this value, this value is used instead. MaxItemsPerResponse: 1000 # Maximum number of concurrent requests to accept in a single # service process, or 0 for no limit. Currently supported only # by keepstore. MaxConcurrentRequests: 0 # Maximum number of 64MiB memory buffers per keepstore server # process, or 0 for no limit. MaxKeepBlobBuffers: 128 # API methods to disable. Disabled methods are not listed in the # discovery document, and respond 404 to all requests. # Example: {"jobs.create":{}, "pipeline_instances.create": {}} DisabledAPIs: {} # Interval (seconds) between asynchronous permission view updates. Any # permission-updating API called with the 'async' parameter schedules a an # update on the permission view in the future, if not already scheduled. AsyncPermissionsUpdateInterval: 20s # Maximum number of concurrent outgoing requests to make while # serving a single incoming multi-cluster (federated) request. MaxRequestAmplification: 4 # RailsSessionSecretToken is a string of alphanumeric characters # used by Rails to sign session tokens. IMPORTANT: This is a # site secret. It should be at least 50 characters. RailsSessionSecretToken: "" # Maximum wall clock time to spend handling an incoming request. RequestTimeout: 5m # Websocket will send a periodic empty event after 'SendTimeout' # if there is no other activity to maintain the connection / # detect dropped connections. SendTimeout: 60s WebsocketClientEventQueue: 64 WebsocketServerEventQueue: 4 # Timeout on requests to internal Keep services. KeepServiceRequestTimeout: 15s Users: # Config parameters to automatically setup new users. If enabled, # this users will be able to self-activate. Enable this if you want # to run an open instance where anyone can create an account and use # the system without requiring manual approval. # # The params AutoSetupNewUsersWith* are meaningful only when AutoSetupNewUsers is turned on. # AutoSetupUsernameBlacklist is a list of usernames to be blacklisted for auto setup. AutoSetupNewUsers: false AutoSetupNewUsersWithVmUUID: "" AutoSetupNewUsersWithRepository: false AutoSetupUsernameBlacklist: arvados: {} git: {} gitolite: {} gitolite-admin: {} root: {} syslog: {} SAMPLE: {} # When NewUsersAreActive is set to true, new users will be active # immediately. This skips the "self-activate" step which enforces # user agreements. Should only be enabled for development. NewUsersAreActive: false # The e-mail address of the user you would like to become marked as an admin # user on their first login. # In the default configuration, authentication happens through the Arvados SSO # server, which uses OAuth2 against Google's servers, so in that case this # should be an address associated with a Google account. AutoAdminUserWithEmail: "" # If AutoAdminFirstUser is set to true, the first user to log in when no # other admin users exist will automatically become an admin user. AutoAdminFirstUser: false # Email address to notify whenever a user creates a profile for the # first time UserProfileNotificationAddress: "" AdminNotifierEmailFrom: arvados@example.com EmailSubjectPrefix: "[ARVADOS] " UserNotifierEmailFrom: arvados@example.com NewUserNotificationRecipients: {} NewInactiveUserNotificationRecipients: {} # Set AnonymousUserToken to enable anonymous user access. You can get # the token by running "bundle exec ./script/get_anonymous_user_token.rb" # in the directory where your API server is running. AnonymousUserToken: "" # If a new user has an alternate email address (local@domain) # with the domain given here, its local part becomes the new # user's default username. Otherwise, the user's primary email # address is used. PreferDomainForUsername: "" AuditLogs: # Time to keep audit logs, in seconds. (An audit log is a row added # to the "logs" table in the PostgreSQL database each time an # Arvados object is created, modified, or deleted.) # # Currently, websocket event notifications rely on audit logs, so # this should not be set lower than 300 (5 minutes). MaxAge: 336h # Maximum number of log rows to delete in a single SQL transaction. # # If MaxDeleteBatch is 0, log entries will never be # deleted by Arvados. Cleanup can be done by an external process # without affecting any Arvados system processes, as long as very # recent (<5 minutes old) logs are not deleted. # # 100000 is a reasonable batch size for most sites. MaxDeleteBatch: 0 # Attributes to suppress in events and audit logs. Notably, # specifying {"manifest_text": {}} here typically makes the database # smaller and faster. # # Warning: Using any non-empty value here can have undesirable side # effects for any client or component that relies on event logs. # Use at your own risk. UnloggedAttributes: {} SystemLogs: # Logging threshold: panic, fatal, error, warn, info, debug, or # trace LogLevel: info # Logging format: json or text Format: json # Maximum characters of (JSON-encoded) query parameters to include # in each request log entry. When params exceed this size, they will # be JSON-encoded, truncated to this size, and logged as # params_truncated. MaxRequestLogParamsSize: 2000 Collections: # Enable access controls for data stored in Keep. This should # always be set to true on a production cluster. BlobSigning: true # BlobSigningKey is a string of alphanumeric characters used to # generate permission signatures for Keep locators. It must be # identical to the permission key given to Keep. IMPORTANT: This # is a site secret. It should be at least 50 characters. # # Modifying BlobSigningKey will invalidate all existing # signatures, which can cause programs to fail (e.g., arv-put, # arv-get, and Crunch jobs). To avoid errors, rotate keys only # when no such processes are running. BlobSigningKey: "" # Enable garbage collection of unreferenced blobs in Keep. BlobTrash: true # Time to leave unreferenced blobs in "trashed" state before # deleting them, or 0 to skip the "trashed" state entirely and # delete unreferenced blobs. # # If you use any Amazon S3 buckets as storage volumes, this # must be at least 24h to avoid occasional data loss. BlobTrashLifetime: 336h # How often to check for (and delete) trashed blocks whose # BlobTrashLifetime has expired. BlobTrashCheckInterval: 24h # Maximum number of concurrent "trash blob" and "delete trashed # blob" operations conducted by a single keepstore process. Each # of these can be set to 0 to disable the respective operation. # # If BlobTrashLifetime is zero, "trash" and "delete trash" # happen at once, so only the lower of these two values is used. BlobTrashConcurrency: 4 BlobDeleteConcurrency: 4 # Maximum number of concurrent "create additional replica of # existing blob" operations conducted by a single keepstore # process. BlobReplicateConcurrency: 4 # Default replication level for collections. This is used when a # collection's replication_desired attribute is nil. DefaultReplication: 2 # BlobSigningTTL determines the minimum lifetime of transient # data, i.e., blocks that are not referenced by # collections. Unreferenced blocks exist for two reasons: # # 1) A data block must be written to a disk/cloud backend device # before a collection can be created/updated with a reference to # it. # # 2) Deleting or updating a collection can remove the last # remaining reference to a data block. # # If BlobSigningTTL is too short, long-running # processes/containers will fail when they take too long (a) # between writing blocks and writing collections that reference # them, or (b) between reading collections and reading the # referenced blocks. # # If BlobSigningTTL is too long, data will still be stored long # after the referring collections are deleted, and you will # needlessly fill up disks or waste money on cloud storage. # # Modifying BlobSigningTTL invalidates existing signatures; see # BlobSigningKey note above. # # The default is 2 weeks. BlobSigningTTL: 336h # When running keep-balance, this is the destination filename for # the list of lost block hashes if there are any, one per line. # Updated automically during each successful run. BlobMissingReport: "" # keep-balance operates periodically, i.e.: do a # scan/balance operation, sleep, repeat. # # BalancePeriod determines the interval between start times of # successive scan/balance operations. If a scan/balance operation # takes longer than RunPeriod, the next one will follow it # immediately. # # If SIGUSR1 is received during an idle period between operations, # the next operation will start immediately. BalancePeriod: 10m # Limits the number of collections retrieved by keep-balance per # API transaction. If this is zero, page size is # determined by the API server's own page size limits (see # API.MaxItemsPerResponse and API.MaxIndexDatabaseRead). BalanceCollectionBatch: 0 # The size of keep-balance's internal queue of # collections. Higher values use more memory and improve throughput # by allowing keep-balance to fetch the next page of collections # while the current page is still being processed. If this is zero # or omitted, pages are processed serially. BalanceCollectionBuffers: 1000 # Default lifetime for ephemeral collections: 2 weeks. This must not # be less than BlobSigningTTL. DefaultTrashLifetime: 336h # Interval (seconds) between trash sweeps. During a trash sweep, # collections are marked as trash if their trash_at time has # arrived, and deleted if their delete_at time has arrived. TrashSweepInterval: 60s # If true, enable collection versioning. # When a collection's preserve_version field is true or the current version # is older than the amount of seconds defined on PreserveVersionIfIdle, # a snapshot of the collection's previous state is created and linked to # the current collection. CollectionVersioning: false # 0s = auto-create a new version on every update. # -1s = never auto-create new versions. # > 0s = auto-create a new version when older than the specified number of seconds. PreserveVersionIfIdle: -1s # If non-empty, allow project and collection names to contain # the "/" character (slash/stroke/solidus), and replace "/" with # the given string in the filesystem hierarchy presented by # WebDAV. Example values are "%2f" and "{slash}". Names that # contain the substitution string itself may result in confusing # behavior, so a value like "_" is not recommended. # # If the default empty value is used, the server will reject # requests to create or rename a collection when the new name # contains "/". # # If the value "/" is used, project and collection names # containing "/" will be allowed, but they will not be # accessible via WebDAV. # # Use of this feature is not recommended, if it can be avoided. ForwardSlashNameSubstitution: "" # Managed collection properties. At creation time, if the client didn't # provide the listed keys, they will be automatically populated following # one of the following behaviors: # # * UUID of the user who owns the containing project. # responsible_person_uuid: {Function: original_owner, Protected: true} # # * Default concrete value. # foo_bar: {Value: baz, Protected: false} # # If Protected is true, only an admin user can modify its value. ManagedProperties: SAMPLE: {Function: original_owner, Protected: true} # In "trust all content" mode, Workbench will redirect download # requests to WebDAV preview link, even in the cases when # WebDAV would have to expose XSS vulnerabilities in order to # handle the redirect (see discussion on Services.WebDAV). # # This setting has no effect in the recommended configuration, # where the WebDAV is configured to have a separate domain for # every collection; in this case XSS protection is provided by # browsers' same-origin policy. # # The default setting (false) is appropriate for a multi-user site. TrustAllContent: false # Cache parameters for WebDAV content serving: # * TTL: Maximum time to cache manifests and permission checks. # * UUIDTTL: Maximum time to cache collection state. # * MaxBlockEntries: Maximum number of block cache entries. # * MaxCollectionEntries: Maximum number of collection cache entries. # * MaxCollectionBytes: Approximate memory limit for collection cache. # * MaxPermissionEntries: Maximum number of permission cache entries. # * MaxUUIDEntries: Maximum number of UUID cache entries. WebDAVCache: TTL: 300s UUIDTTL: 5s MaxBlockEntries: 4 MaxCollectionEntries: 1000 MaxCollectionBytes: 100000000 MaxPermissionEntries: 1000 MaxUUIDEntries: 1000 Login: # These settings are provided by your OAuth2 provider (eg # Google) used to perform upstream authentication. ProviderAppID: "" ProviderAppSecret: "" # (Experimental) Authenticate with Google, bypassing the # SSO-provider gateway service. Use the Google Cloud console to # enable the People API (APIs and Services > Enable APIs and # services > Google People API > Enable), generate a Client ID # and secret (APIs and Services > Credentials > Create # credentials > OAuth client ID > Web application) and add your # controller's /login URL (e.g., # "https://zzzzz.example.com/login") as an authorized redirect # URL. # # Incompatible with ForceLegacyAPI14. ProviderAppID must be # blank. GoogleClientID: "" GoogleClientSecret: "" # Allow users to log in to existing accounts using any verified # email address listed by their Google account. If true, the # Google People API must be enabled in order for Google login to # work. If false, only the primary email address will be used. GoogleAlternateEmailAddresses: true # The cluster ID to delegate the user database. When set, # logins on this cluster will be redirected to the login cluster # (login cluster must appear in RemoteClusters with Proxy: true) LoginCluster: "" # How long a cached token belonging to a remote cluster will # remain valid before it needs to be revalidated. RemoteTokenRefresh: 5m Git: # Path to git or gitolite-shell executable. Each authenticated # request will execute this program with the single argument "http-backend" GitCommand: /usr/bin/git # Path to Gitolite's home directory. If a non-empty path is given, # the CGI environment will be set up to support the use of # gitolite-shell as a GitCommand: for example, if GitoliteHome is # "/gh", then the CGI environment will have GITOLITE_HTTP_HOME=/gh, # PATH=$PATH:/gh/bin, and GL_BYPASS_ACCESS_CHECKS=1. GitoliteHome: "" # Git repositories must be readable by api server, or you won't be # able to submit crunch jobs. To pass the test suites, put a clone # of the arvados tree in {git_repositories_dir}/arvados.git or # {git_repositories_dir}/arvados/.git Repositories: /var/lib/arvados/git/repositories TLS: Certificate: "" Key: "" Insecure: false Containers: # List of supported Docker Registry image formats that compute nodes # are able to use. `arv keep docker` will error out if a user tries # to store an image with an unsupported format. Use an empty array # to skip the compatibility check (and display a warning message to # that effect). # # Example for sites running docker < 1.10: {"v1": {}} # Example for sites running docker >= 1.10: {"v2": {}} # Example for disabling check: {} SupportedDockerImageFormats: "v2": {} SAMPLE: {} # Include details about job reuse decisions in the server log. This # causes additional database queries to run, so it should not be # enabled unless you expect to examine the resulting logs for # troubleshooting purposes. LogReuseDecisions: false # Default value for keep_cache_ram of a container's runtime_constraints. DefaultKeepCacheRAM: 268435456 # Number of times a container can be unlocked before being # automatically cancelled. MaxDispatchAttempts: 5 # Default value for container_count_max for container requests. This is the # number of times Arvados will create a new container to satisfy a container # request. If a container is cancelled it will retry a new container if # container_count < container_count_max on any container requests associated # with the cancelled container. MaxRetryAttempts: 3 # The maximum number of compute nodes that can be in use simultaneously # If this limit is reduced, any existing nodes with slot number >= new limit # will not be counted against the new limit. In other words, the new limit # won't be strictly enforced until those nodes with higher slot numbers # go down. MaxComputeVMs: 64 # Preemptible instance support (e.g. AWS Spot Instances) # When true, child containers will get created with the preemptible # scheduling parameter parameter set. UsePreemptibleInstances: false # PEM encoded SSH key (RSA, DSA, or ECDSA) used by the # (experimental) cloud dispatcher for executing containers on # worker VMs. Begins with "-----BEGIN RSA PRIVATE KEY-----\n" # and ends with "\n-----END RSA PRIVATE KEY-----\n". DispatchPrivateKey: none # Maximum time to wait for workers to come up before abandoning # stale locks from a previous dispatch process. StaleLockTimeout: 1m # The crunch-run command to manage the container on a node CrunchRunCommand: "crunch-run" # Extra arguments to add to crunch-run invocation # Example: ["--cgroup-parent-subsystem=memory"] CrunchRunArgumentsList: [] # Extra RAM to reserve on the node, in addition to # the amount specified in the container's RuntimeConstraints ReserveExtraRAM: 256MiB # Minimum time between two attempts to run the same container MinRetryPeriod: 0s Logging: # When you run the db:delete_old_container_logs task, it will find # containers that have been finished for at least this many seconds, # and delete their stdout, stderr, arv-mount, crunch-run, and # crunchstat logs from the logs table. MaxAge: 720h # These two settings control how frequently log events are flushed to the # database. Log lines are buffered until either crunch_log_bytes_per_event # has been reached or crunch_log_seconds_between_events has elapsed since # the last flush. LogBytesPerEvent: 4096 LogSecondsBetweenEvents: 5s # The sample period for throttling logs. LogThrottlePeriod: 60s # Maximum number of bytes that job can log over crunch_log_throttle_period # before being silenced until the end of the period. LogThrottleBytes: 65536 # Maximum number of lines that job can log over crunch_log_throttle_period # before being silenced until the end of the period. LogThrottleLines: 1024 # Maximum bytes that may be logged by a single job. Log bytes that are # silenced by throttling are not counted against this total. LimitLogBytesPerJob: 67108864 LogPartialLineThrottlePeriod: 5s # Container logs are written to Keep and saved in a # collection, which is updated periodically while the # container runs. This value sets the interval between # collection updates. LogUpdatePeriod: 30m # The log collection is also updated when the specified amount of # log data (given in bytes) is produced in less than one update # period. LogUpdateSize: 32MiB SLURM: PrioritySpread: 0 SbatchArgumentsList: [] SbatchEnvironmentVariables: SAMPLE: "" Managed: # Path to dns server configuration directory # (e.g. /etc/unbound.d/conf.d). If false, do not write any config # files or touch restart.txt (see below). DNSServerConfDir: "" # Template file for the dns server host snippets. See # unbound.template in this directory for an example. If false, do # not write any config files. DNSServerConfTemplate: "" # String to write to {dns_server_conf_dir}/restart.txt (with a # trailing newline) after updating local data. If false, do not # open or write the restart.txt file. DNSServerReloadCommand: "" # Command to run after each DNS update. Template variables will be # substituted; see the "unbound" example below. If false, do not run # a command. DNSServerUpdateCommand: "" ComputeNodeDomain: "" ComputeNodeNameservers: "192.168.1.1": {} SAMPLE: {} # Hostname to assign to a compute node when it sends a "ping" and the # hostname in its Node record is nil. # During bootstrapping, the "ping" script is expected to notice the # hostname given in the ping response, and update its unix hostname # accordingly. # If false, leave the hostname alone (this is appropriate if your compute # nodes' hostnames are already assigned by some other mechanism). # # One way or another, the hostnames of your node records should agree # with your DNS records and your /etc/slurm-llnl/slurm.conf files. # # Example for compute0000, compute0001, ....: # assign_node_hostname: compute%04d # (See http://ruby-doc.org/core-2.2.2/Kernel.html#method-i-format for more.) AssignNodeHostname: "compute%d" JobsAPI: # Enable the legacy 'jobs' API (crunch v1). This value must be a string. # # Note: this only enables read-only access, creating new # legacy jobs and pipelines is not supported. # # 'auto' -- (default) enable the Jobs API only if it has been used before # (i.e., there are job records in the database) # 'true' -- enable the Jobs API despite lack of existing records. # 'false' -- disable the Jobs API despite presence of existing records. Enable: 'auto' # Git repositories must be readable by api server, or you won't be # able to submit crunch jobs. To pass the test suites, put a clone # of the arvados tree in {git_repositories_dir}/arvados.git or # {git_repositories_dir}/arvados/.git GitInternalDir: /var/lib/arvados/internal.git CloudVMs: # Enable the cloud scheduler (experimental). Enable: false # Name/number of port where workers' SSH services listen. SSHPort: "22" # Interval between queue polls. PollInterval: 10s # Shell command to execute on each worker to determine whether # the worker is booted and ready to run containers. It should # exit zero if the worker is ready. BootProbeCommand: "docker ps -q" # Minimum interval between consecutive probes to a single # worker. ProbeInterval: 10s # Maximum probes per second, across all workers in a pool. MaxProbesPerSecond: 10 # Time before repeating SIGTERM when killing a container. TimeoutSignal: 5s # Time to give up on SIGTERM and write off the worker. TimeoutTERM: 2m # Maximum create/destroy-instance operations per second (0 = # unlimited). MaxCloudOpsPerSecond: 0 # Interval between cloud provider syncs/updates ("list all # instances"). SyncInterval: 1m # Time to leave an idle worker running (in case new containers # appear in the queue that it can run) before shutting it # down. TimeoutIdle: 1m # Time to wait for a new worker to boot (i.e., pass # BootProbeCommand) before giving up and shutting it down. TimeoutBooting: 10m # Maximum time a worker can stay alive with no successful # probes before being automatically shut down. TimeoutProbe: 10m # Time after shutting down a worker to retry the # shutdown/destroy operation. TimeoutShutdown: 10s # Worker VM image ID. ImageID: "" # An executable file (located on the dispatcher host) to be # copied to cloud instances at runtime and used as the # container runner/supervisor. The default value is the # dispatcher program itself. # # Use the empty string to disable this step: nothing will be # copied, and cloud instances are assumed to have a suitable # version of crunch-run installed. DeployRunnerBinary: "/proc/self/exe" # Tags to add on all resources (VMs, NICs, disks) created by # the container dispatcher. (Arvados's own tags -- # InstanceType, IdleBehavior, and InstanceSecret -- will also # be added.) ResourceTags: SAMPLE: "tag value" # Prefix for predefined tags used by Arvados (InstanceSetID, # InstanceType, InstanceSecret, IdleBehavior). With the # default value "Arvados", tags are "ArvadosInstanceSetID", # "ArvadosInstanceSecret", etc. # # This should only be changed while no cloud resources are in # use and the cloud dispatcher is not running. Otherwise, # VMs/resources that were added using the old tag prefix will # need to be detected and cleaned up manually. TagKeyPrefix: Arvados # Cloud driver: "azure" (Microsoft Azure) or "ec2" (Amazon AWS). Driver: ec2 # Cloud-specific driver parameters. DriverParameters: # (ec2) Credentials. AccessKeyID: "" SecretAccessKey: "" # (ec2) Instance configuration. SecurityGroupIDs: "SAMPLE": {} SubnetID: "" Region: "" EBSVolumeType: gp2 AdminUsername: debian # (azure) Credentials. SubscriptionID: "" ClientID: "" ClientSecret: "" TenantID: "" # (azure) Instance configuration. CloudEnvironment: AzurePublicCloud ResourceGroup: "" Location: centralus Network: "" Subnet: "" StorageAccount: "" BlobContainer: "" DeleteDanglingResourcesAfter: 20s AdminUsername: arvados InstanceTypes: # Use the instance type name as the key (in place of "SAMPLE" in # this sample entry). SAMPLE: # Cloud provider's instance type. Defaults to the configured type name. ProviderType: "" VCPUs: 1 RAM: 128MiB IncludedScratch: 16GB AddedScratch: 0 Price: 0.1 Preemptible: false Volumes: SAMPLE: # AccessViaHosts specifies which keepstore processes can read # and write data on the volume. # # For a local filesystem, AccessViaHosts has one entry, # indicating which server the filesystem is located on. # # For a network-attached backend accessible by all keepstore # servers, like a cloud storage bucket or an NFS mount, # AccessViaHosts can be empty/omitted. # # Further info/examples: # https://doc.arvados.org/install/configure-fs-storage.html # https://doc.arvados.org/install/configure-s3-object-storage.html # https://doc.arvados.org/install/configure-azure-blob-storage.html AccessViaHosts: SAMPLE: ReadOnly: false "http://host1.example:25107": {} ReadOnly: false Replication: 1 StorageClasses: default: true SAMPLE: true Driver: s3 DriverParameters: # for s3 driver -- see # https://doc.arvados.org/install/configure-s3-object-storage.html IAMRole: aaaaa AccessKey: aaaaa SecretKey: aaaaa Endpoint: "" Region: us-east-1a Bucket: aaaaa LocationConstraint: false IndexPageSize: 1000 ConnectTimeout: 1m ReadTimeout: 10m RaceWindow: 24h # For S3 driver, potentially unsafe tuning parameter, # intentionally excluded from main documentation. # # Enable deletion (garbage collection) even when the # configured BlobTrashLifetime is zero. WARNING: eventual # consistency may result in race conditions that can cause # data loss. Do not enable this unless you understand and # accept the risk. UnsafeDelete: false # for azure driver -- see # https://doc.arvados.org/install/configure-azure-blob-storage.html StorageAccountName: aaaaa StorageAccountKey: aaaaa StorageBaseURL: core.windows.net ContainerName: aaaaa RequestTimeout: 30s ListBlobsRetryDelay: 10s ListBlobsMaxAttempts: 10 MaxGetBytes: 0 WriteRaceInterval: 15s WriteRacePollTime: 1s # for local directory driver -- see # https://doc.arvados.org/install/configure-fs-storage.html Root: /var/lib/arvados/keep-data # For local directory driver, potentially confusing tuning # parameter, intentionally excluded from main documentation. # # When true, read and write operations (for whole 64MiB # blocks) on an individual volume will queued and issued # serially. When false, read and write operations will be # issued concurrently. # # May possibly improve throughput if you have physical spinning disks # and experience contention when there are multiple requests # to the same volume. # # Otherwise, when using SSDs, RAID, or a shared network filesystem, you # should leave this alone. Serialize: false Mail: MailchimpAPIKey: "" MailchimpListID: "" SendUserSetupNotificationEmail: true # Bug/issue report notification to and from addresses IssueReporterEmailFrom: "arvados@example.com" IssueReporterEmailTo: "arvados@example.com" SupportEmailAddress: "arvados@example.com" # Generic issue email from EmailFrom: "arvados@example.com" RemoteClusters: "*": Host: "" Proxy: false Scheme: https Insecure: false ActivateUsers: false SAMPLE: # API endpoint host or host:port; default is {id}.arvadosapi.com Host: sample.arvadosapi.com # Perform a proxy request when a local client requests an # object belonging to this remote. Proxy: false # Default "https". Can be set to "http" for testing. Scheme: https # Disable TLS verify. Can be set to true for testing. Insecure: false # When users present tokens issued by this remote cluster, and # their accounts are active on the remote cluster, activate # them on this cluster too. ActivateUsers: false Workbench: # Workbench1 configs Theme: default ActivationContactLink: mailto:info@arvados.org ArvadosDocsite: https://doc.arvados.org ArvadosPublicDataDocURL: https://playground.arvados.org/projects/public ShowUserAgreementInline: false SecretKeyBase: "" # Scratch directory used by the remote repository browsing # feature. If it doesn't exist, it (and any missing parents) will be # created using mkdir_p. RepositoryCache: /var/www/arvados-workbench/current/tmp/git # Below is a sample setting of user_profile_form_fields config parameter. # This configuration parameter should be set to either false (to disable) or # to a map as shown below. # Configure the map of input fields to be displayed in the profile page # using the attribute "key" for each of the input fields. # This sample shows configuration with one required and one optional form fields. # For each of these input fields: # You can specify "Type" as "text" or "select". # List the "Options" to be displayed for each of the "select" menu. # Set "Required" as "true" for any of these fields to make them required. # If any of the required fields are missing in the user's profile, the user will be # redirected to the profile page before they can access any Workbench features. UserProfileFormFields: SAMPLE: Type: select FormFieldTitle: Best color FormFieldDescription: your favorite color Required: false Position: 1 Options: red: {} blue: {} green: {} SAMPLE: {} # exampleTextValue: # key that will be set in properties # Type: text # # FormFieldTitle: "" # FormFieldDescription: "" # Required: true # Position: 1 # exampleOptionsValue: # Type: select # FormFieldTitle: "" # FormFieldDescription: "" # Required: true # Position: 1 # Options: # red: {} # blue: {} # yellow: {} # Use "UserProfileFormMessage to configure the message you want # to display on the profile page. UserProfileFormMessage: 'Welcome to Arvados. All required fields must be completed before you can proceed.' # Mimetypes of applications for which the view icon # would be enabled in a collection's show page. # It is sufficient to list only applications here. # No need to list text and image types. ApplicationMimetypesWithViewIcon: cwl: {} fasta: {} go: {} javascript: {} json: {} pdf: {} python: {} x-python: {} r: {} rtf: {} sam: {} x-sh: {} vnd.realvnc.bed: {} xml: {} xsl: {} SAMPLE: {} # The maximum number of bytes to load in the log viewer LogViewerMaxBytes: 1M # When anonymous_user_token is configured, show public projects page EnablePublicProjectsPage: true # By default, disable the "Getting Started" popup which is specific to Arvados playground EnableGettingStartedPopup: false # Ask Arvados API server to compress its response payloads. APIResponseCompression: true # Timeouts for API requests. APIClientConnectTimeout: 2m APIClientReceiveTimeout: 5m # Maximum number of historic log records of a running job to fetch # and display in the Log tab, while subscribing to web sockets. RunningJobLogRecordsToFetch: 2000 # In systems with many shared projects, loading of dashboard and topnav # cab be slow due to collections indexing; use the following parameters # to suppress these properties ShowRecentCollectionsOnDashboard: true ShowUserNotifications: true # Enable/disable "multi-site search" in top nav ("true"/"false"), or # a link to the multi-site search page on a "home" Workbench site. # # Example: # https://workbench.qr1hi.arvadosapi.com/collections/multisite MultiSiteSearch: "" # Should workbench allow management of local git repositories? Set to false if # the jobs api is disabled and there are no local git repositories. Repositories: true SiteName: Arvados Workbench ProfilingEnabled: false # This is related to obsolete Google OpenID 1.0 login # but some workbench stuff still expects it to be set. DefaultOpenIdPrefix: "https://www.google.com/accounts/o8/id" # Workbench2 configs VocabularyURL: "" FileViewersConfigURL: "" # Workbench welcome screen, this is HTML text that will be # incorporated directly onto the page. WelcomePageHTML: |

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Arvados Workbench uses your name and email address only for identification, and does not retrieve any other personal information. # Workbench screen displayed to inactive users. This is HTML # text that will be incorporated directly onto the page. InactivePageHTML: |

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# Connecting to Arvados shell VMs tends to be site-specific. # Put any special instructions here. This is HTML text that will # be incorporated directly onto the Workbench page. SSHHelpPageHTML: | Accessing an Arvados VM with SSH (generic instructions). Site configurations vary. Contact your local cluster administrator if you have difficulty accessing an Arvados shell node. # Bypass new (Arvados 1.5) API implementations, and hand off # requests directly to Rails instead. This can provide a temporary # workaround for clients that are incompatible with the new API # implementation. Note that it also disables some new federation # features and will be removed in a future release. ForceLegacyAPI14: false