1 // Copyright (C) The Arvados Authors. All rights reserved.
3 // SPDX-License-Identifier: AGPL-3.0
5 import { ContainerState } from "models/container";
7 describe("Process tests", function () {
12 // Only set up common users once. These aren't set up as aliases because
13 // aliases are cleaned up after every test. Also it doesn't make sense
14 // to set the same users on beforeEach() over and over again, so we
15 // separate a little from Cypress' 'Best Practices' here.
16 cy.getUser("admin", "Admin", "User", true, true)
19 adminUser = this.adminUser;
21 cy.getUser("user", "Active", "User", false, true)
24 activeUser = this.activeUser;
28 function setupDockerImage(image_name) {
29 // Create a collection that will be used as a docker image for the tests.
30 cy.createCollection(adminUser.token, {
33 ". d21353cfe035e3e384563ee55eadbb2f+67108864 5c77a43e329b9838cbec18ff42790e57+55605760 0:122714624:sha256:d8309758b8fe2c81034ffc8a10c36460b77db7bc5e7b448c4e5b684f9d95a678.tar\n",
36 .then(function (dockerImage) {
37 // Give read permissions to the active user on the docker image.
38 cy.createLink(adminUser.token, {
39 link_class: "permission",
41 tail_uuid: activeUser.user.uuid,
42 head_uuid: dockerImage.uuid,
44 .as("dockerImagePermission")
46 // Set-up docker image collection tags
47 cy.createLink(activeUser.token, {
48 link_class: "docker_image_repo+tag",
50 head_uuid: dockerImage.uuid,
51 }).as("dockerImageRepoTag");
52 cy.createLink(activeUser.token, {
53 link_class: "docker_image_hash",
54 name: "sha256:d8309758b8fe2c81034ffc8a10c36460b77db7bc5e7b448c4e5b684f9d95a678",
55 head_uuid: dockerImage.uuid,
56 }).as("dockerImageHash");
59 return cy.getAll("@dockerImage", "@dockerImageRepoTag", "@dockerImageHash", "@dockerImagePermission").then(function ([dockerImage]) {
64 function createContainerRequest(user, name, docker_image, command, reuse = false, state = "Uncommitted") {
65 return setupDockerImage(docker_image).then(function (dockerImage) {
66 return cy.createContainerRequest(user.token, {
69 container_image: dockerImage.portable_data_hash, // for some reason, docker_image doesn't work here
70 output_path: "stdout.txt",
72 runtime_constraints: {
88 describe('Multiselect Toolbar', () => {
89 it('shows the appropriate buttons in the toolbar', () => {
91 const msButtonTooltips = [
97 'Copy and re-run process',
103 createContainerRequest(
105 `test_container_request ${Math.floor(Math.random() * 999999)}`,
107 ["echo", "hello world"],
110 ).then(function (containerRequest) {
111 cy.loginAs(activeUser);
112 cy.goToPath(`/processes/${containerRequest.uuid}`);
113 cy.get("[data-cy=process-details]").should("contain", containerRequest.name);
114 cy.get("[data-cy=process-details-attributes-modifiedby-user]").contains(`Active User (${activeUser.user.uuid})`);
115 cy.get("[data-cy=process-details-attributes-runtime-user]").should("not.exist");
116 cy.get("[data-cy=side-panel-tree]").contains("Home Projects").click();
118 cy.get('[data-cy=data-table-row]').contains(containerRequest.name).should('exist').parents('td').parent().click()
120 cy.get('[data-cy=multiselect-button]').should('have.length', msButtonTooltips.length)
121 for (let i = 0; i < msButtonTooltips.length; i++) {
122 cy.get('[data-cy=multiselect-button]').eq(i).trigger('mouseover');
123 cy.get('body').contains(msButtonTooltips[i]).should('exist')
124 cy.get('[data-cy=multiselect-button]').eq(i).trigger('mouseout');
130 describe("Details panel", function () {
131 it("shows process details", function () {
132 createContainerRequest(
134 `test_container_request ${Math.floor(Math.random() * 999999)}`,
136 ["echo", "hello world"],
139 ).then(function (containerRequest) {
140 cy.loginAs(activeUser);
141 cy.goToPath(`/processes/${containerRequest.uuid}`);
142 cy.get("[data-cy=process-details]").should("contain", containerRequest.name);
143 cy.get("[data-cy=process-details-attributes-modifiedby-user]").contains(`Active User (${activeUser.user.uuid})`);
144 cy.get("[data-cy=process-details-attributes-runtime-user]").should("not.exist");
147 // Fake submitted by another user
148 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
149 req.on('response', res => {
150 res.body.modified_by_user_uuid = "zzzzz-tpzed-000000000000000";
154 createContainerRequest(
156 `test_container_request ${Math.floor(Math.random() * 999999)}`,
158 ["echo", "hello world"],
161 ).then(function (containerRequest) {
162 cy.loginAs(activeUser);
163 cy.goToPath(`/processes/${containerRequest.uuid}`);
164 cy.get("[data-cy=process-details]").should("contain", containerRequest.name);
165 cy.get("[data-cy=process-details-attributes-modifiedby-user]").contains(`zzzzz-tpzed-000000000000000`);
166 cy.get("[data-cy=process-details-attributes-runtime-user]").contains(`Active User (${activeUser.user.uuid})`);
170 it("should show runtime status indicators", function () {
171 // Setup running container with runtime_status error & warning messages
172 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed")
173 .as("containerRequest")
174 .then(function (containerRequest) {
175 expect(containerRequest.state).to.equal("Committed");
176 expect(containerRequest.container_uuid).not.to.be.equal("");
178 cy.getContainer(activeUser.token, containerRequest.container_uuid).then(function (queuedContainer) {
179 expect(queuedContainer.state).to.be.equal("Queued");
181 cy.updateContainer(adminUser.token, containerRequest.container_uuid, {
183 }).then(function (lockedContainer) {
184 expect(lockedContainer.state).to.be.equal("Locked");
186 cy.updateContainer(adminUser.token, lockedContainer.uuid, {
189 error: "Something went wrong",
190 errorDetail: "Process exited with status 1",
191 warning: "Free disk space is low",
194 .as("runningContainer")
195 .then(function (runningContainer) {
196 expect(runningContainer.state).to.be.equal("Running");
197 expect(runningContainer.runtime_status).to.be.deep.equal({
198 error: "Something went wrong",
199 errorDetail: "Process exited with status 1",
200 warning: "Free disk space is low",
205 // Test that the UI shows the error and warning messages
206 cy.getAll("@containerRequest", "@runningContainer").then(function ([containerRequest]) {
207 cy.loginAs(activeUser);
208 cy.goToPath(`/processes/${containerRequest.uuid}`);
209 cy.get("[data-cy=process-runtime-status-error]")
210 .should("contain", "Something went wrong")
211 .and("contain", "Process exited with status 1");
212 cy.get("[data-cy=process-runtime-status-warning]")
213 .should("contain", "Free disk space is low")
214 .and("contain", "No additional warning details available");
217 // Force container_count for testing
218 let containerCount = 2;
219 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
220 req.on('response', res => {
221 res.body.container_count = containerCount;
225 cy.getAll("@containerRequest").then(function ([containerRequest]) {
226 cy.goToPath(`/processes/${containerRequest.uuid}`);
227 cy.get("[data-cy=process-runtime-status-retry-warning]", { timeout: 7000 }).should("contain", "Process retried 1 time");
230 cy.getAll("@containerRequest").then(function ([containerRequest]) {
232 cy.goToPath(`/processes/${containerRequest.uuid}`);
233 cy.get("[data-cy=process-runtime-status-retry-warning]", { timeout: 7000 }).should("contain", "Process retried 2 times");
237 it("allows copying processes", function () {
238 const crName = "first_container_request";
239 const copiedCrName = "copied_container_request";
240 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
241 cy.loginAs(activeUser);
242 cy.goToPath(`/processes/${containerRequest.uuid}`);
243 cy.get("[data-cy=process-details]").should("contain", crName);
244 cy.get("[data-cy=process-details]").find('button[aria-label="More options"]').click();
245 cy.get("ul[data-cy=context-menu]").contains("Copy and re-run process").click();
248 cy.get("[data-cy=form-dialog]").within(() => {
249 cy.get("input[name=name]").clear().type(copiedCrName);
250 cy.get("[data-cy=projects-tree-home-tree-picker]").click();
251 cy.get("[data-cy=form-submit-btn]").click();
254 cy.get("[data-cy=process-details]").should("contain", copiedCrName);
255 cy.get("[data-cy=process-details]").find("button").contains("Run");
258 const getFakeContainer = fakeContainerUuid => ({
259 href: `/containers/${fakeContainerUuid}`,
260 kind: "arvados#container",
261 etag: "ecfosljpnxfari9a8m7e4yv06",
262 uuid: fakeContainerUuid,
263 owner_uuid: "zzzzz-tpzed-000000000000000",
264 created_at: "2023-02-13T15:55:47.308915000Z",
265 modified_by_client_uuid: "zzzzz-ozdt8-q6dzdi1lcc03155",
266 modified_by_user_uuid: "zzzzz-tpzed-000000000000000",
267 modified_at: "2023-02-15T19:12:45.987086000Z",
269 "arvados-cwl-runner",
272 "--project-uuid=zzzzz-j7d0g-yr18k784zplfeza",
273 "/var/lib/cwl/workflow.json#main",
274 "/var/lib/cwl/cwl.input.json",
276 container_image: "4ad7d11381df349e464694762db14e04+303",
277 cwd: "/var/spool/cwl",
281 locked_by_uuid: null,
284 output_path: "/var/spool/cwl",
286 runtime_constraints: {
291 hardware_capability: "",
293 keep_cache_disk: 2147483648,
301 scheduling_parameters: {
306 runtime_user_uuid: "zzzzz-tpzed-vllbpebicy84rd5",
307 runtime_auth_scopes: ["all"],
309 gateway_address: null,
310 interactive_session_started: false,
311 output_storage_classes: ["default"],
312 output_properties: {},
314 subrequests_cost: 0.0,
317 it("shows cancel button when appropriate", function () {
318 // Ignore collection requests
320 { method: "GET", url: `**/arvados/v1/collections/*` },
327 // Uncommitted container
328 const crUncommitted = `Test process ${Math.floor(Math.random() * 999999)}`;
329 createContainerRequest(activeUser, crUncommitted, "arvados/jobs", ["echo", "hello world"], false, "Uncommitted").then(function (
332 cy.loginAs(activeUser);
333 // Navigate to process and verify run / cancel button
334 cy.goToPath(`/processes/${containerRequest.uuid}`);
336 cy.get("[data-cy=process-details]").should("contain", crUncommitted);
337 cy.get("[data-cy=process-run-button]").should("exist");
338 cy.get("[data-cy=process-cancel-button]").should("not.exist");
342 const crQueued = `Test process ${Math.floor(Math.random() * 999999)}`;
343 const fakeCrUuid = "zzzzz-dz642-000000000000001";
344 createContainerRequest(activeUser, crQueued, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
347 // Fake container uuid
348 cy.intercept({ method: "GET", url: `**/arvados/v1/container_requests/${containerRequest.uuid}` }, req => {
349 req.on('response', res => {
350 res.body.output_uuid = fakeCrUuid;
351 res.body.priority = 500;
352 res.body.state = "Committed";
357 const container = getFakeContainer(fakeCrUuid);
359 { method: "GET", url: `**/arvados/v1/container/${fakeCrUuid}` },
362 body: { ...container, state: "Queued", priority: 500 },
366 // Navigate to process and verify cancel button
367 cy.goToPath(`/processes/${containerRequest.uuid}`);
369 cy.get("[data-cy=process-details]").should("contain", crQueued);
370 cy.get("[data-cy=process-cancel-button]").contains("Cancel");
374 const crLocked = `Test process ${Math.floor(Math.random() * 999999)}`;
375 const fakeCrLockedUuid = "zzzzz-dz642-000000000000002";
376 createContainerRequest(activeUser, crLocked, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
379 // Fake container uuid
380 cy.intercept({ method: "GET", url: `**/arvados/v1/container_requests/${containerRequest.uuid}` }, req => {
381 req.on('response', res => {
382 res.body.output_uuid = fakeCrLockedUuid;
383 res.body.priority = 500;
384 res.body.state = "Committed";
389 const container = getFakeContainer(fakeCrLockedUuid);
391 { method: "GET", url: `**/arvados/v1/container/${fakeCrLockedUuid}` },
394 body: { ...container, state: "Locked", priority: 500 },
398 // Navigate to process and verify cancel button
399 cy.goToPath(`/processes/${containerRequest.uuid}`);
401 cy.get("[data-cy=process-details]").should("contain", crLocked);
402 cy.get("[data-cy=process-cancel-button]").contains("Cancel");
406 const crOnHold = `Test process ${Math.floor(Math.random() * 999999)}`;
407 const fakeCrOnHoldUuid = "zzzzz-dz642-000000000000003";
408 createContainerRequest(activeUser, crOnHold, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
411 // Fake container uuid
412 cy.intercept({ method: "GET", url: `**/arvados/v1/container_requests/${containerRequest.uuid}` }, req => {
413 req.on('response', res => {
414 res.body.output_uuid = fakeCrOnHoldUuid;
415 res.body.priority = 0;
416 res.body.state = "Committed";
421 const container = getFakeContainer(fakeCrOnHoldUuid);
423 { method: "GET", url: `**/arvados/v1/container/${fakeCrOnHoldUuid}` },
426 body: { ...container, state: "Queued", priority: 0 },
430 // Navigate to process and verify cancel button
431 cy.goToPath(`/processes/${containerRequest.uuid}`);
433 cy.get("[data-cy=process-details]").should("contain", crOnHold);
434 cy.get("[data-cy=process-run-button]").should("exist");
435 cy.get("[data-cy=process-cancel-button]").should("not.exist");
440 describe("Logs panel", function () {
441 it("shows live process logs", function () {
442 cy.intercept({ method: "GET", url: "**/arvados/v1/containers/*" }, req => {
443 req.on('response', res => {
444 res.body.state = ContainerState.RUNNING;
448 const crName = "test_container_request";
449 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
450 // Create empty log file before loading process page
451 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [""]);
453 cy.loginAs(activeUser);
454 cy.goToPath(`/processes/${containerRequest.uuid}`);
455 cy.get("[data-cy=process-details]").should("contain", crName);
456 cy.get("[data-cy=process-logs]").should("contain", "No logs yet").and("not.contain", "hello world");
459 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", ["2023-07-18T20:14:48.128642814Z hello world"]).then(() => {
460 cy.get("[data-cy=process-logs]", { timeout: 7000 }).should("not.contain", "No logs yet").and("contain", "hello world");
463 // Append new log line to different file
464 cy.appendLog(adminUser.token, containerRequest.uuid, "stderr.txt", ["2023-07-18T20:14:49.128642814Z hello new line"]).then(() => {
465 cy.get("[data-cy=process-logs]", { timeout: 7000 }).should("not.contain", "No logs yet").and("contain", "hello new line");
470 it("filters process logs by event type", function () {
471 const nodeInfoLogs = [
473 "Linux compute-99cb150b26149780de44b929577e1aed-19rgca8vobuvc4p 5.4.0-1059-azure #62~18.04.1-Ubuntu SMP Tue Sep 14 17:53:18 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux",
476 "vendor_id : GenuineIntel",
479 "model name : Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz",
481 const crunchRunLogs = [
482 "2022-03-22T13:56:22.542417997Z using local keepstore process (pid 3733) at http://localhost:46837, writing logs to keepstore.txt in log collection",
483 "2022-03-22T13:56:26.237571754Z crunch-run 2.4.0~dev20220321141729 (go1.17.1) started",
484 "2022-03-22T13:56:26.244704134Z crunch-run process has uid=0(root) gid=0(root) groups=0(root)",
485 "2022-03-22T13:56:26.244862836Z Executing container 'zzzzz-dz642-1wokwvcct9s9du3' using docker runtime",
486 "2022-03-22T13:56:26.245037738Z Executing on host 'compute-99cb150b26149780de44b929577e1aed-19rgca8vobuvc4p'",
489 "2022-03-22T13:56:22.542417987Z Lorem ipsum dolor sit amet, consectetur adipiscing elit. Donec dui nisi, hendrerit porta sapien a, pretium dignissim purus.",
490 "2022-03-22T13:56:22.542417997Z Integer viverra, mauris finibus aliquet ultricies, dui mauris cursus justo, ut venenatis nibh ex eget neque.",
491 "2022-03-22T13:56:22.542418007Z In hac habitasse platea dictumst.",
492 "2022-03-22T13:56:22.542418027Z Fusce fringilla turpis id accumsan faucibus. Donec congue congue ex non posuere. In semper mi quis tristique rhoncus.",
493 "2022-03-22T13:56:22.542418037Z Interdum et malesuada fames ac ante ipsum primis in faucibus.",
494 "2022-03-22T13:56:22.542418047Z Quisque fermentum tortor ex, ut suscipit velit feugiat faucibus.",
495 "2022-03-22T13:56:22.542418057Z Donec vitae porta risus, at luctus nulla. Mauris gravida iaculis ipsum, id sagittis tortor egestas ac.",
496 "2022-03-22T13:56:22.542418067Z Maecenas condimentum volutpat nulla. Integer lacinia maximus risus eu posuere.",
497 "2022-03-22T13:56:22.542418077Z Donec vitae leo id augue gravida bibendum.",
498 "2022-03-22T13:56:22.542418087Z Nam libero libero, pretium ac faucibus elementum, mattis nec ex.",
499 "2022-03-22T13:56:22.542418097Z Nullam id laoreet nibh. Vivamus tellus metus, pretium quis justo ut, bibendum varius metus. Pellentesque vitae accumsan lorem, quis tincidunt augue.",
500 "2022-03-22T13:56:22.542418107Z Aliquam viverra nisi nulla, et efficitur dolor mattis in.",
501 "2022-03-22T13:56:22.542418117Z Sed at enim sit amet nulla tincidunt mattis. Aenean eget aliquet ex, non ultrices ex. Nulla ex tortor, vestibulum aliquam tempor ac, aliquam vel est.",
502 "2022-03-22T13:56:22.542418127Z Fusce auctor faucibus libero id venenatis. Etiam sodales, odio eu cursus efficitur, quam sem blandit ex, quis porttitor enim dui quis lectus. In id tincidunt felis.",
503 "2022-03-22T13:56:22.542418137Z Phasellus non ex quis arcu tempus faucibus molestie in sapien.",
504 "2022-03-22T13:56:22.542418147Z Duis tristique semper dolor, vitae pulvinar risus.",
505 "2022-03-22T13:56:22.542418157Z Aliquam tortor elit, luctus nec tortor eget, porta tristique nulla.",
506 "2022-03-22T13:56:22.542418167Z Nulla eget mollis ipsum.",
509 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
512 cy.appendLog(adminUser.token, containerRequest.uuid, "node-info.txt", nodeInfoLogs).as("nodeInfoLogs");
513 cy.appendLog(adminUser.token, containerRequest.uuid, "crunch-run.txt", crunchRunLogs).as("crunchRunLogs");
514 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", stdoutLogs).as("stdoutLogs");
516 cy.getAll("@stdoutLogs", "@nodeInfoLogs", "@crunchRunLogs").then(function () {
517 cy.loginAs(activeUser);
518 cy.goToPath(`/processes/${containerRequest.uuid}`);
519 // Should show main logs by default
520 cy.get("[data-cy=process-logs-filter]", { timeout: 7000 }).should("contain", "Main logs");
521 cy.get("[data-cy=process-logs]")
522 .should("contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
523 .and("not.contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
524 .and("contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
526 cy.get("[data-cy=process-logs-filter]").click();
527 cy.get("body").contains("li", "All logs").click();
528 cy.get("[data-cy=process-logs]")
529 .should("contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
530 .and("contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
531 .and("contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
532 // Select 'node-info' logs
533 cy.get("[data-cy=process-logs-filter]").click();
534 cy.get("body").contains("li", "node-info").click();
535 cy.get("[data-cy=process-logs]")
536 .should("not.contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
537 .and("contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
538 .and("not.contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
539 // Select 'stdout' logs
540 cy.get("[data-cy=process-logs-filter]").click();
541 cy.get("body").contains("li", "stdout").click();
542 cy.get("[data-cy=process-logs]")
543 .should("contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
544 .and("not.contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
545 .and("not.contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
550 it("sorts combined logs", function () {
551 const crName = "test_container_request";
552 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
553 cy.appendLog(adminUser.token, containerRequest.uuid, "node-info.txt", [
561 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [
562 "2023-07-18T20:14:48.128642814Z first",
563 "2023-07-18T20:14:49.128642814Z third",
566 cy.appendLog(adminUser.token, containerRequest.uuid, "stderr.txt", ["2023-07-18T20:14:48.528642814Z second"]).as("stderr");
568 cy.loginAs(activeUser);
569 cy.goToPath(`/processes/${containerRequest.uuid}`);
570 cy.get("[data-cy=process-details]").should("contain", crName);
571 cy.get("[data-cy=process-logs]").should("contain", "No logs yet");
573 cy.getAll("@node-info", "@stdout", "@stderr").then(() => {
574 // Verify sorted main logs
575 cy.get("[data-cy=process-logs] span > p", { timeout: 7000 }).eq(0).should("contain", "2023-07-18T20:14:48.128642814Z first");
576 cy.get("[data-cy=process-logs] span > p").eq(1).should("contain", "2023-07-18T20:14:48.528642814Z second");
577 cy.get("[data-cy=process-logs] span > p").eq(2).should("contain", "2023-07-18T20:14:49.128642814Z third");
579 // Switch to All logs
580 cy.get("[data-cy=process-logs-filter]").click();
581 cy.get("body").contains("li", "All logs").click();
582 // Verify non-sorted lines were preserved
583 cy.get("[data-cy=process-logs] span > p").eq(0).should("contain", "3: nodeinfo 1");
584 cy.get("[data-cy=process-logs] span > p").eq(1).should("contain", "2: nodeinfo 2");
585 cy.get("[data-cy=process-logs] span > p").eq(2).should("contain", "1: nodeinfo 3");
586 cy.get("[data-cy=process-logs] span > p").eq(3).should("contain", "2: nodeinfo 4");
587 cy.get("[data-cy=process-logs] span > p").eq(4).should("contain", "3: nodeinfo 5");
588 // Verify sorted logs
589 cy.get("[data-cy=process-logs] span > p").eq(5).should("contain", "2023-07-18T20:14:48.128642814Z first");
590 cy.get("[data-cy=process-logs] span > p").eq(6).should("contain", "2023-07-18T20:14:48.528642814Z second");
591 cy.get("[data-cy=process-logs] span > p").eq(7).should("contain", "2023-07-18T20:14:49.128642814Z third");
596 it("preserves original ordering of lines within the same log type", function () {
597 const crName = "test_container_request";
598 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
599 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [
601 "2023-07-18T20:14:46.000000000Z A out 1",
602 // Comes fourth in a contiguous block
603 "2023-07-18T20:14:48.128642814Z A out 2",
604 "2023-07-18T20:14:48.128642814Z X out 3",
605 "2023-07-18T20:14:48.128642814Z A out 4",
608 cy.appendLog(adminUser.token, containerRequest.uuid, "stderr.txt", [
610 "2023-07-18T20:14:47.000000000Z Z err 1",
611 // Comes third in a contiguous block
612 "2023-07-18T20:14:48.128642814Z B err 2",
613 "2023-07-18T20:14:48.128642814Z C err 3",
614 "2023-07-18T20:14:48.128642814Z Y err 4",
615 "2023-07-18T20:14:48.128642814Z Z err 5",
616 "2023-07-18T20:14:48.128642814Z A err 6",
619 cy.loginAs(activeUser);
620 cy.goToPath(`/processes/${containerRequest.uuid}`);
621 cy.get("[data-cy=process-details]").should("contain", crName);
622 cy.get("[data-cy=process-logs]").should("contain", "No logs yet");
624 cy.getAll("@stdout", "@stderr").then(() => {
625 // Switch to All logs
626 cy.get("[data-cy=process-logs-filter]").click();
627 cy.get("body").contains("li", "All logs").click();
628 // Verify sorted logs
629 cy.get("[data-cy=process-logs] span > p").eq(0).should("contain", "2023-07-18T20:14:46.000000000Z A out 1");
630 cy.get("[data-cy=process-logs] span > p").eq(1).should("contain", "2023-07-18T20:14:47.000000000Z Z err 1");
631 cy.get("[data-cy=process-logs] span > p").eq(2).should("contain", "2023-07-18T20:14:48.128642814Z B err 2");
632 cy.get("[data-cy=process-logs] span > p").eq(3).should("contain", "2023-07-18T20:14:48.128642814Z C err 3");
633 cy.get("[data-cy=process-logs] span > p").eq(4).should("contain", "2023-07-18T20:14:48.128642814Z Y err 4");
634 cy.get("[data-cy=process-logs] span > p").eq(5).should("contain", "2023-07-18T20:14:48.128642814Z Z err 5");
635 cy.get("[data-cy=process-logs] span > p").eq(6).should("contain", "2023-07-18T20:14:48.128642814Z A err 6");
636 cy.get("[data-cy=process-logs] span > p").eq(7).should("contain", "2023-07-18T20:14:48.128642814Z A out 2");
637 cy.get("[data-cy=process-logs] span > p").eq(8).should("contain", "2023-07-18T20:14:48.128642814Z X out 3");
638 cy.get("[data-cy=process-logs] span > p").eq(9).should("contain", "2023-07-18T20:14:48.128642814Z A out 4");
643 it("correctly generates sniplines", function () {
644 const SNIPLINE = `================ ✀ ================ ✀ ========= Some log(s) were skipped ========= ✀ ================ ✀ ================`;
645 const crName = "test_container_request";
646 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
647 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [
648 "X".repeat(63999) + "_" + "O".repeat(100) + "_" + "X".repeat(63999),
651 cy.loginAs(activeUser);
652 cy.goToPath(`/processes/${containerRequest.uuid}`);
653 cy.get("[data-cy=process-details]").should("contain", crName);
654 cy.get("[data-cy=process-logs]").should("contain", "No logs yet");
656 // Switch to stdout since lines are unsortable (no timestamp)
657 cy.get("[data-cy=process-logs-filter]").click();
658 cy.get("body").contains("li", "stdout").click();
660 cy.getAll("@stdout").then(() => {
661 // Verify first 64KB and snipline
662 cy.get("[data-cy=process-logs] span > p", { timeout: 7000 })
664 .should("contain", "X".repeat(63999) + "_\n" + SNIPLINE);
666 cy.get("[data-cy=process-logs] span > p")
668 .should("contain", "_" + "X".repeat(63999));
669 // Verify none of the Os got through
670 cy.get("[data-cy=process-logs] span > p").should("not.contain", "O");
675 it("correctly break long lines when no obvious line separation exists", function () {
676 function randomString(length) {
677 const chars = 'ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789';
679 for (let i = 0; i < length; i++) {
680 res += chars.charAt(Math.floor(Math.random() * chars.length));
685 const logLinesQty = 10;
687 for (let i = 0; i < logLinesQty; i++) {
688 const length = Math.floor(Math.random() * 500) + 500;
689 logLines.push(randomString(length));
692 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
695 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", logLines).as("stdoutLogs");
697 cy.getAll("@stdoutLogs").then(function () {
698 cy.loginAs(activeUser);
699 cy.goToPath(`/processes/${containerRequest.uuid}`);
700 // Select 'stdout' log filter
701 cy.get("[data-cy=process-logs-filter]").click();
702 cy.get("body").contains("li", "stdout").click();
703 cy.get("[data-cy=process-logs] span > p")
704 .should('have.length', logLinesQty)
706 expect($p.text().length).to.be.greaterThan(499);
708 // This looks like an ugly hack, but I was not able
709 // to get [client|scroll]Width attributes through
710 // the usual Cypress methods.
711 const parentClientWidth = $p[0].parentElement.clientWidth;
712 const parentScrollWidth = $p[0].parentElement.scrollWidth
713 // Scrollbar should not be visible
714 expect(parentClientWidth).to.be.eq(parentScrollWidth);
721 describe("I/O panel", function () {
725 id: "#main/input_file",
726 label: "Label Description",
731 basename: "input1.tar",
733 location: "keep:00000000000000000000000000000000+01/input1.tar",
736 basename: "input1-2.txt",
738 location: "keep:00000000000000000000000000000000+01/input1-2.txt",
741 basename: "input1-3.txt",
743 location: "keep:00000000000000000000000000000000+01/input1-3.txt",
746 basename: "input1-4.txt",
748 location: "keep:00000000000000000000000000000000+01/input1-4.txt",
756 id: "#main/input_dir",
757 doc: "Doc Description",
762 basename: "11111111111111111111111111111111+01",
764 location: "keep:11111111111111111111111111111111+01",
770 id: "#main/input_bool",
771 doc: ["Doc desc 1", "Doc desc 2"],
780 id: "#main/input_int",
789 id: "#main/input_long",
798 id: "#main/input_float",
807 id: "#main/input_double",
816 id: "#main/input_string",
820 input_string: "Hello World",
825 id: "#main/input_file_array",
834 basename: "input2.tar",
836 location: "keep:00000000000000000000000000000000+02/input2.tar",
839 basename: "input3.tar",
841 location: "keep:00000000000000000000000000000000+03/input3.tar",
844 basename: "input3-2.txt",
846 location: "keep:00000000000000000000000000000000+03/input3-2.txt",
851 $import: "import_path",
858 id: "#main/input_dir_array",
867 basename: "11111111111111111111111111111111+02",
869 location: "keep:11111111111111111111111111111111+02",
872 basename: "11111111111111111111111111111111+03",
874 location: "keep:11111111111111111111111111111111+03",
877 $import: "import_path",
884 id: "#main/input_int_array",
896 $import: "import_path",
903 id: "#main/input_long_array",
914 $import: "import_path",
921 id: "#main/input_float_array",
933 $import: "import_path",
940 id: "#main/input_double_array",
947 input_double_array: [
952 $import: "import_path",
959 id: "#main/input_string_array",
966 input_string_array: [
971 $import: "import_path",
978 id: "#main/input_bool_include",
982 input_bool_include: {
983 $include: "include_path",
989 id: "#main/input_int_include",
994 $include: "include_path",
1000 id: "#main/input_float_include",
1004 input_float_include: {
1005 $include: "include_path",
1011 id: "#main/input_string_include",
1015 input_string_include: {
1016 $include: "include_path",
1022 id: "#main/input_file_include",
1026 input_file_include: {
1027 $include: "include_path",
1033 id: "#main/input_directory_include",
1037 input_directory_include: {
1038 $include: "include_path",
1044 id: "#main/input_file_url",
1049 basename: "index.html",
1051 location: "http://example.com/index.html",
1057 const testOutputs = [
1060 id: "#main/output_file",
1061 label: "Label Description",
1066 basename: "cat.png",
1068 location: "cat.png",
1074 id: "#main/output_file_with_secondary",
1075 doc: "Doc Description",
1079 output_file_with_secondary: {
1080 basename: "main.dat",
1082 location: "main.dat",
1085 basename: "secondary.dat",
1087 location: "secondary.dat",
1090 basename: "secondary2.dat",
1092 location: "secondary2.dat",
1100 id: "#main/output_dir",
1101 doc: ["Doc desc 1", "Doc desc 2"],
1106 basename: "outdir1",
1108 location: "outdir1",
1114 id: "#main/output_bool",
1123 id: "#main/output_int",
1132 id: "#main/output_long",
1141 id: "#main/output_float",
1145 output_float: 100.5,
1150 id: "#main/output_double",
1154 output_double: 100.3,
1159 id: "#main/output_string",
1163 output_string: "Hello output",
1168 id: "#main/output_file_array",
1175 output_file_array: [
1177 basename: "output2.tar",
1179 location: "output2.tar",
1182 basename: "output3.tar",
1184 location: "output3.tar",
1191 id: "#main/output_dir_array",
1200 basename: "outdir2",
1202 location: "outdir2",
1205 basename: "outdir3",
1207 location: "outdir3",
1214 id: "#main/output_int_array",
1221 output_int_array: [10, 11, 12],
1226 id: "#main/output_long_array",
1233 output_long_array: [51, 52],
1238 id: "#main/output_float_array",
1245 output_float_array: [100.2, 100.4, 100.6],
1250 id: "#main/output_double_array",
1257 output_double_array: [100.1, 100.2, 100.3],
1262 id: "#main/output_string_array",
1269 output_string_array: ["Hello", "Output", "!"],
1274 const verifyIOParameter = (name, label, doc, val, collection, multipleRows) => {
1278 .within($mainRow => {
1279 cy.get($mainRow).scrollIntoView();
1280 label && cy.contains(label);
1283 cy.get($mainRow).nextUntil('[data-cy="process-io-param"]').as("secondaryRows");
1285 if (Array.isArray(val)) {
1286 val.forEach(v => cy.get("@secondaryRows").contains(v));
1288 cy.get("@secondaryRows").contains(val);
1292 cy.get("@secondaryRows").contains(collection);
1296 if (Array.isArray(val)) {
1297 val.forEach(v => cy.contains(v));
1303 cy.contains(collection);
1309 const verifyIOParameterImage = (name, url) => {
1314 cy.get('[alt="Inline Preview"]')
1315 .should("be.visible")
1317 expect($img[0].naturalWidth).to.be.greaterThan(0);
1318 expect($img[0].src).contains(url);
1323 it("displays IO parameters with keep links and previews", function () {
1324 // Create output collection for real files
1325 cy.createCollection(adminUser.token, {
1326 name: `Test collection ${Math.floor(Math.random() * 999999)}`,
1327 owner_uuid: activeUser.user.uuid,
1328 }).then(testOutputCollection => {
1329 cy.loginAs(activeUser);
1331 cy.goToPath(`/collections/${testOutputCollection.uuid}`);
1333 cy.get("[data-cy=upload-button]").click();
1335 cy.fixture("files/cat.png", "base64").then(content => {
1336 cy.get("[data-cy=drag-and-drop]").upload(content, "cat.png");
1337 cy.get("[data-cy=form-submit-btn]").click();
1338 cy.waitForDom().get("[data-cy=form-submit-btn]").should("not.exist");
1339 // Confirm final collection state.
1340 cy.get("[data-cy=collection-files-panel]").contains("cat.png").should("exist");
1343 cy.getCollection(activeUser.token, testOutputCollection.uuid).as("testOutputCollection");
1346 // Get updated collection pdh
1347 cy.getAll("@testOutputCollection").then(([testOutputCollection]) => {
1348 // Add output uuid and inputs to container request
1349 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
1350 req.on('response', res => {
1351 res.body.output_uuid = testOutputCollection.uuid;
1352 res.body.mounts["/var/lib/cwl/cwl.input.json"] = {
1353 content: testInputs.map(param => param.input).reduce((acc, val) => Object.assign(acc, val), {}),
1355 res.body.mounts["/var/lib/cwl/workflow.json"] = {
1360 inputs: testInputs.map(input => input.definition),
1361 outputs: testOutputs.map(output => output.definition),
1369 // Stub fake output collection
1371 { method: "GET", url: `**/arvados/v1/collections/${testOutputCollection.uuid}*` },
1375 uuid: testOutputCollection.uuid,
1376 portable_data_hash: testOutputCollection.portable_data_hash,
1381 // Stub fake output json
1383 { method: "GET", url: "**/c%3Dzzzzz-4zz18-zzzzzzzzzzzzzzz/cwl.output.json" },
1386 body: testOutputs.map(param => param.output).reduce((acc, val) => Object.assign(acc, val), {}),
1390 // Stub webdav response, points to output json
1392 { method: "PROPFIND", url: "*" },
1394 fixture: "webdav-propfind-outputs.xml",
1399 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").as(
1403 cy.getAll("@containerRequest", "@testOutputCollection").then(function ([containerRequest, testOutputCollection]) {
1404 cy.goToPath(`/processes/${containerRequest.uuid}`);
1405 cy.get("[data-cy=process-io-card] h6")
1406 .contains("Input Parameters")
1407 .parents("[data-cy=process-io-card]")
1409 cy.get(ctx).scrollIntoView();
1410 verifyIOParameter("input_file", null, "Label Description", "input1.tar", "00000000000000000000000000000000+01");
1411 verifyIOParameter("input_file", null, "Label Description", "input1-2.txt", undefined, true);
1412 verifyIOParameter("input_file", null, "Label Description", "input1-3.txt", undefined, true);
1413 verifyIOParameter("input_file", null, "Label Description", "input1-4.txt", undefined, true);
1414 verifyIOParameter("input_dir", null, "Doc Description", "/", "11111111111111111111111111111111+01");
1415 verifyIOParameter("input_bool", null, "Doc desc 1, Doc desc 2", "true");
1416 verifyIOParameter("input_int", null, null, "1");
1417 verifyIOParameter("input_long", null, null, "1");
1418 verifyIOParameter("input_float", null, null, "1.5");
1419 verifyIOParameter("input_double", null, null, "1.3");
1420 verifyIOParameter("input_string", null, null, "Hello World");
1421 verifyIOParameter("input_file_array", null, null, "input2.tar", "00000000000000000000000000000000+02");
1422 verifyIOParameter("input_file_array", null, null, "input3.tar", undefined, true);
1423 verifyIOParameter("input_file_array", null, null, "input3-2.txt", undefined, true);
1424 verifyIOParameter("input_file_array", null, null, "Cannot display value", undefined, true);
1425 verifyIOParameter("input_dir_array", null, null, "/", "11111111111111111111111111111111+02");
1426 verifyIOParameter("input_dir_array", null, null, "/", "11111111111111111111111111111111+03", true);
1427 verifyIOParameter("input_dir_array", null, null, "Cannot display value", undefined, true);
1428 verifyIOParameter("input_int_array", null, null, ["1", "3", "5", "Cannot display value"]);
1429 verifyIOParameter("input_long_array", null, null, ["10", "20", "Cannot display value"]);
1430 verifyIOParameter("input_float_array", null, null, ["10.2", "10.4", "10.6", "Cannot display value"]);
1431 verifyIOParameter("input_double_array", null, null, ["20.1", "20.2", "20.3", "Cannot display value"]);
1432 verifyIOParameter("input_string_array", null, null, ["Hello", "World", "!", "Cannot display value"]);
1433 verifyIOParameter("input_bool_include", null, null, "Cannot display value");
1434 verifyIOParameter("input_int_include", null, null, "Cannot display value");
1435 verifyIOParameter("input_float_include", null, null, "Cannot display value");
1436 verifyIOParameter("input_string_include", null, null, "Cannot display value");
1437 verifyIOParameter("input_file_include", null, null, "Cannot display value");
1438 verifyIOParameter("input_directory_include", null, null, "Cannot display value");
1439 verifyIOParameter("input_file_url", null, null, "http://example.com/index.html");
1441 cy.get("[data-cy=process-io-card] h6")
1442 .contains("Output Parameters")
1443 .parents("[data-cy=process-io-card]")
1445 cy.get(ctx).scrollIntoView();
1446 const outPdh = testOutputCollection.portable_data_hash;
1448 verifyIOParameter("output_file", null, "Label Description", "cat.png", `${outPdh}`);
1449 // Disabled until image preview returns
1450 // verifyIOParameterImage("output_file", `/c=${outPdh}/cat.png`);
1451 verifyIOParameter("output_file_with_secondary", null, "Doc Description", "main.dat", `${outPdh}`);
1452 verifyIOParameter("output_file_with_secondary", null, "Doc Description", "secondary.dat", undefined, true);
1453 verifyIOParameter("output_file_with_secondary", null, "Doc Description", "secondary2.dat", undefined, true);
1454 verifyIOParameter("output_dir", null, "Doc desc 1, Doc desc 2", "outdir1", `${outPdh}`);
1455 verifyIOParameter("output_bool", null, null, "true");
1456 verifyIOParameter("output_int", null, null, "1");
1457 verifyIOParameter("output_long", null, null, "1");
1458 verifyIOParameter("output_float", null, null, "100.5");
1459 verifyIOParameter("output_double", null, null, "100.3");
1460 verifyIOParameter("output_string", null, null, "Hello output");
1461 verifyIOParameter("output_file_array", null, null, "output2.tar", `${outPdh}`);
1462 verifyIOParameter("output_file_array", null, null, "output3.tar", undefined, true);
1463 verifyIOParameter("output_dir_array", null, null, "outdir2", `${outPdh}`);
1464 verifyIOParameter("output_dir_array", null, null, "outdir3", undefined, true);
1465 verifyIOParameter("output_int_array", null, null, ["10", "11", "12"]);
1466 verifyIOParameter("output_long_array", null, null, ["51", "52"]);
1467 verifyIOParameter("output_float_array", null, null, ["100.2", "100.4", "100.6"]);
1468 verifyIOParameter("output_double_array", null, null, ["100.1", "100.2", "100.3"]);
1469 verifyIOParameter("output_string_array", null, null, ["Hello", "Output", "!"]);
1474 it("displays IO parameters with no value", function () {
1475 const fakeOutputUUID = "zzzzz-4zz18-abcdefghijklmno";
1476 const fakeOutputPDH = "11111111111111111111111111111111+99/";
1478 cy.loginAs(activeUser);
1480 // Add output uuid and inputs to container request
1481 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
1482 req.on('response', res => {
1483 res.body.output_uuid = fakeOutputUUID;
1484 res.body.mounts["/var/lib/cwl/cwl.input.json"] = {
1487 res.body.mounts["/var/lib/cwl/workflow.json"] = {
1492 inputs: testInputs.map(input => input.definition),
1493 outputs: testOutputs.map(output => output.definition),
1501 // Stub fake output collection
1503 { method: "GET", url: `**/arvados/v1/collections/${fakeOutputUUID}*` },
1507 uuid: fakeOutputUUID,
1508 portable_data_hash: fakeOutputPDH,
1513 // Stub fake output json
1515 { method: "GET", url: `**/c%3D${fakeOutputUUID}/cwl.output.json` },
1522 cy.readFile("cypress/fixtures/webdav-propfind-outputs.xml").then(data => {
1523 // Stub webdav response, points to output json
1525 { method: "PROPFIND", url: "*" },
1528 body: data.replace(/zzzzz-4zz18-zzzzzzzzzzzzzzz/g, fakeOutputUUID),
1533 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").as(
1537 cy.getAll("@containerRequest").then(function ([containerRequest]) {
1538 cy.goToPath(`/processes/${containerRequest.uuid}`);
1541 cy.get("[data-cy=process-io-card] h6")
1542 .contains("Input Parameters")
1543 .parents("[data-cy=process-io-card]")
1545 cy.get(ctx).scrollIntoView();
1549 testInputs.map((input) => {
1550 verifyIOParameter(input.definition.id.split('/').slice(-1)[0], null, null, "No value");
1553 cy.get("[data-cy=process-io-card] h6")
1554 .contains("Output Parameters")
1555 .parents("[data-cy=process-io-card]")
1557 cy.get(ctx).scrollIntoView();
1559 testOutputs.map((output) => {
1560 verifyIOParameter(output.definition.id.split('/').slice(-1)[0], null, null, "No value");