cypress/integration/create-workflow.spec.js

   1 // Copyright (C) The Arvados Authors. All rights reserved.
   2 //
   3 // SPDX-License-Identifier: AGPL-3.0
   4
   5 describe('Create workflow tests', function () {
   6     let activeUser;
   7     let adminUser;
   8
   9     before(function () {
  10         cy.getUser('admin', 'Admin', 'User', true, true)
  11             .as('adminUser').then(function () {
  12                 adminUser = this.adminUser;
  13             }
  14             );
  15         cy.getUser('collectionuser1', 'Collection', 'User', false, true)
  16             .as('activeUser').then(function () {
  17                 activeUser = this.activeUser;
  18             }
  19             );
  20     });
  21
  22     beforeEach(function () {
  23         cy.clearCookies();
  24         cy.clearLocalStorage();
  25     });
  26
  27     it('can create project with nested data', function () {
  28         cy.createGroup(adminUser.token, {
  29             group_class: "project",
  30             name: `Test project (${Math.floor(Math.random() * 999999)})`,
  31         }).as('project1');
  32
  33         cy.get('@project1').then(() => {
  34             cy.createGroup(adminUser.token, {
  35                 group_class: "project",
  36                 name: `Test project (${Math.floor(Math.random() * 999999)})`,
  37                 owner_uuid: this.project1.uuid,
  38             }).as('project2');
  39         })
  40
  41         cy.get('@project2').then(() => {
  42             cy.createGroup(adminUser.token, {
  43                 group_class: "project",
  44                 name: `Test project (${Math.floor(Math.random() * 999999)})`,
  45                 owner_uuid: this.project2.uuid,
  46             }).as('project3');
  47         });
  48
  49         cy.get('@project3').then(() => {
  50             cy.createWorkflow(adminUser.token, {
  51                 name: `TestWorkflow${Math.floor(Math.random() * 999999)}.cwl`,
  52                 definition: "{\n    \"$graph\": [\n        {\n            \"class\": \"Workflow\",\n            \"doc\": \"Reverse the lines in a document, then sort those lines.\",\n            \"hints\": [\n                {\n                    \"acrContainerImage\": \"99b0201f4cade456b4c9d343769a3b70+261\",\n                    \"class\": \"http://arvados.org/cwl#WorkflowRunnerResources\"\n                }\n            ],\n            \"id\": \"#main\",\n            \"inputs\": [\n                {\n                    \"default\": null,\n                    \"doc\": \"The input file to be processed.\",\n                    \"id\": \"#main/input\",\n                    \"type\": \"File\"\n                },\n                {\n                    \"default\": true,\n                    \"doc\": \"If true, reverse (decending) sort\",\n                    \"id\": \"#main/reverse_sort\",\n                    \"type\": \"boolean\"\n                }\n            ],\n            \"outputs\": [\n                {\n                    \"doc\": \"The output with the lines reversed and sorted.\",\n                    \"id\": \"#main/output\",\n                    \"outputSource\": \"#main/sorted/output\",\n                    \"type\": \"File\"\n                }\n            ],\n            \"steps\": [\n                {\n                    \"id\": \"#main/rev\",\n                    \"in\": [\n                        {\n                            \"id\": \"#main/rev/input\",\n                            \"source\": \"#main/input\"\n                        }\n                    ],\n                    \"out\": [\n                        \"#main/rev/output\"\n                    ],\n                    \"run\": \"#revtool.cwl\"\n                },\n                {\n                    \"id\": \"#main/sorted\",\n                    \"in\": [\n                        {\n                            \"id\": \"#main/sorted/input\",\n                            \"source\": \"#main/rev/output\"\n                        },\n                        {\n                            \"id\": \"#main/sorted/reverse\",\n                            \"source\": \"#main/reverse_sort\"\n                        }\n                    ],\n                    \"out\": [\n                        \"#main/sorted/output\"\n                    ],\n                    \"run\": \"#sorttool.cwl\"\n                }\n            ]\n        },\n        {\n            \"baseCommand\": \"rev\",\n            \"class\": \"CommandLineTool\",\n            \"doc\": \"Reverse each line using the `rev` command\",\n            \"hints\": [\n                {\n                    \"class\": \"ResourceRequirement\",\n                    \"ramMin\": 8\n                }\n            ],\n            \"id\": \"#revtool.cwl\",\n            \"inputs\": [\n                {\n                    \"id\": \"#revtool.cwl/input\",\n                    \"inputBinding\": {},\n                    \"type\": \"File\"\n                }\n            ],\n            \"outputs\": [\n                {\n                    \"id\": \"#revtool.cwl/output\",\n                    \"outputBinding\": {\n                        \"glob\": \"output.txt\"\n                    },\n                    \"type\": \"File\"\n                }\n            ],\n            \"stdout\": \"output.txt\"\n        },\n        {\n            \"baseCommand\": \"sort\",\n            \"class\": \"CommandLineTool\",\n            \"doc\": \"Sort lines using the `sort` command\",\n            \"hints\": [\n                {\n                    \"class\": \"ResourceRequirement\",\n                    \"ramMin\": 8\n                }\n            ],\n            \"id\": \"#sorttool.cwl\",\n            \"inputs\": [\n                {\n                    \"id\": \"#sorttool.cwl/reverse\",\n                    \"inputBinding\": {\n                        \"position\": 1,\n                        \"prefix\": \"-r\"\n                    },\n                    \"type\": \"boolean\"\n                },\n                {\n                    \"id\": \"#sorttool.cwl/input\",\n                    \"inputBinding\": {\n                        \"position\": 2\n                    },\n                    \"type\": \"File\"\n                }\n            ],\n            \"outputs\": [\n                {\n                    \"id\": \"#sorttool.cwl/output\",\n                    \"outputBinding\": {\n                        \"glob\": \"output.txt\"\n                    },\n                    \"type\": \"File\"\n                }\n            ],\n            \"stdout\": \"output.txt\"\n        }\n    ],\n    \"cwlVersion\": \"v1.0\"\n}",
  53             })
  54                 .as('testWorkflow');
  55
  56             cy.createCollection(adminUser.token, {
  57                 name: `Test collection ${Math.floor(Math.random() * 999999)}`,
  58                 owner_uuid: this.project3.uuid,
  59                 manifest_text: "./subdir 37b51d194a7513e45b56f6524f2d51f2+3 0:3:foo\n. 37b51d194a7513e45b56f6524f2d51f2+3 0:3:baz\n"
  60             })
  61                 .as('testCollection');
  62         });
  63
  64         cy.get('@testWorkflow').then(() => {
  65             cy.loginAs(adminUser);
  66
  67             cy.get('[data-cy=side-panel-button]').click();
  68             cy.get('[data-cy=side-panel-run-process]').click();
  69
  70             cy.get('.layout-pane')
  71                 .contains(this.testWorkflow.name)
  72                 .click();
  73
  74             cy.get('[data-cy=run-process-next-button]').click();
  75
  76             cy.get('[data-cy=new-process-panel]').contains('Run workflow').should('be.disabled');
  77
  78             cy.get('[data-cy=new-process-panel]')
  79                 .within(() => {
  80                     cy.get('[name=name]').type(`Workflow name (${Math.floor(Math.random() * 999999)})`);
  81                     cy.contains('input').next().click();
  82                 });
  83
  84             cy.get('[data-cy=choose-a-file-dialog]').as('chooseFileDialog');
  85             cy.get('@chooseFileDialog').contains('Home Projects').closest('ul').find('i').click();
  86
  87             cy.get('@project1').then((project1) => {
  88                 cy.get('@chooseFileDialog').find(`[data-id=${project1.uuid}]`).find('i').click();
  89             });
  90
  91             cy.get('@project2').then((project2) => {
  92                 cy.get('@chooseFileDialog').find(`[data-id=${project2.uuid}]`).find('i').click();
  93             });
  94
  95             cy.get('@project3').then((project3) => {
  96                 cy.get('@chooseFileDialog').find(`[data-id=${project3.uuid}]`).find('i').click();
  97             });
  98
  99             cy.get('@testCollection').then((testCollection) => {
 100                 cy.get('@chooseFileDialog').find(`[data-id=${testCollection.uuid}]`).find('i').click();
 101             });
 102
 103             cy.get('@chooseFileDialog').contains('baz').click();
 104
 105             cy.get('@chooseFileDialog').find('button').contains('Ok').click();
 106
 107             cy.get('[data-cy=new-process-panel]')
 108                 .find('button').contains('Run workflow').should('not.be.disabled');
 109         });
 110     });
 111
 112     ['workflow_with_array_fields.yaml', 'workflow_with_default_array_fields.yaml'].forEach((yamlfile) =>
 113     it('can select multi files when creating workflow '+yamlfile, () => {
 114         cy.createProject({
 115             owningUser: activeUser,
 116             projectName: 'myProject1',
 117             addToFavorites: true
 118         });
 119
 120         cy.createCollection(adminUser.token, {
 121             name: `Test collection ${Math.floor(Math.random() * 999999)}`,
 122             owner_uuid: activeUser.user.uuid,
 123             manifest_text: ". 37b51d194a7513e45b56f6524f2d51f2+3 0:3:bar\n. 37b51d194a7513e45b56f6524f2d51f2+3 0:3:baz\n"
 124         })
 125             .as('testCollection');
 126
 127         cy.createCollection(adminUser.token, {
 128             name: `Test collection ${Math.floor(Math.random() * 999999)}`,
 129             owner_uuid: activeUser.user.uuid,
 130             manifest_text: `. 37b51d194a7513e45b56f6524f2d51f2+3 0:3:buz\n`
 131         })
 132             .as('testCollection2');
 133
 134         cy.getAll('@myProject1', '@testCollection', '@testCollection2')
 135             .then(function ([myProject1, testCollection, testCollection2]) {
 136                 cy.readFile('cypress/fixtures/'+yamlfile).then(workflow => {
 137                     cy.createWorkflow(adminUser.token, {
 138                         name: `TestWorkflow${Math.floor(Math.random() * 999999)}.cwl`,
 139                         definition: workflow,
 140                         owner_uuid: myProject1.uuid,
 141                     })
 142                         .as('testWorkflow');
 143                 });
 144
 145                 cy.loginAs(activeUser);
 146
 147                 cy.get('main').contains(myProject1.name).click();
 148
 149                 cy.get('[data-cy=side-panel-button]').click();
 150
 151                 cy.get('#aside-menu-list').contains('Run a workflow').click();
 152
 153                 cy.get('@testWorkflow')
 154                     .then((testWorkflow) => {
 155                         cy.get('main').contains(testWorkflow.name).click();
 156                         cy.get('[data-cy=run-process-next-button]').click();
 157
 158                         cy.get('label').contains('foo').parent('div').find('input').click();
 159                         cy.get('div[role=dialog]')
 160                             .within(() => {
 161                                 // must use .then to avoid selecting instead of expanding https://github.com/cypress-io/cypress/issues/5529
 162                                 cy.get('p').contains('Home Projects').closest('ul')
 163                                     .find('i')
 164                                     .then(el => el.click());
 165
 166                                 cy.get(`[data-id=${testCollection.uuid}]`)
 167                                     .find('i').click();
 168
 169                                 cy.wait(1000);
 170                                 cy.contains('bar').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 171                                 cy.contains('baz').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 172
 173                                 cy.get('[data-cy=ok-button]').click();
 174                             });
 175
 176                         cy.get('label').contains('bar').parent('div').find('input').click();
 177                         cy.get('div[role=dialog]')
 178                             .within(() => {
 179                                 // must use .then to avoid selecting instead of expanding https://github.com/cypress-io/cypress/issues/5529
 180                                 cy.get('p').contains('Home Projects').closest('ul')
 181                                     .find('i')
 182                                     .then(el => el.click());
 183
 184                                 cy.get(`[data-id=${testCollection.uuid}]`)
 185                                     .find('input[type=checkbox]').click();
 186
 187                                 cy.get(`[data-id=${testCollection2.uuid}]`)
 188                                     .find('input[type=checkbox]').click();
 189
 190                                 cy.get('[data-cy=ok-button]').click();
 191                             });
 192                     });
 193
 194                 cy.get('label').contains('foo').parent('div')
 195                     .within(() => {
 196                         cy.contains('baz');
 197                         cy.contains('bar');
 198                     });
 199
 200                 cy.get('label').contains('bar').parent('div')
 201                     .within(() => {
 202                         cy.contains(testCollection.name);
 203                         cy.contains(testCollection2.name);
 204                     });
 205             });
 206     }));
 207
 208     it('allows selecting collection subdirectories and reselects existing selections', () => {
 209         cy.createProject({
 210             owningUser: activeUser,
 211             projectName: 'myProject1',
 212             addToFavorites: true
 213         });
 214
 215         cy.createCollection(adminUser.token, {
 216             name: `Test collection ${Math.floor(Math.random() * 999999)}`,
 217             owner_uuid: activeUser.user.uuid,
 218             manifest_text: "./subdir/dir1 d41d8cd98f00b204e9800998ecf8427e+0 0:0:\\056\n./subdir/dir2 d41d8cd98f00b204e9800998ecf8427e+0 0:0:\\056\n"
 219         })
 220             .as('testCollection');
 221
 222         cy.getAll('@myProject1', '@testCollection')
 223             .then(function ([myProject1, testCollection]) {
 224                 cy.readFile('cypress/fixtures/workflow_directory_array.yaml').then(workflow => {
 225                     cy.createWorkflow(adminUser.token, {
 226                         name: `TestWorkflow${Math.floor(Math.random() * 999999)}.cwl`,
 227                         definition: workflow,
 228                         owner_uuid: myProject1.uuid,
 229                     })
 230                         .as('testWorkflow');
 231                 });
 232
 233                 cy.loginAs(activeUser);
 234
 235                 cy.get('main').contains(myProject1.name).click();
 236
 237                 cy.get('[data-cy=side-panel-button]').click();
 238
 239                 cy.get('#aside-menu-list').contains('Run a workflow').click();
 240
 241                 cy.get('@testWorkflow')
 242                     .then((testWorkflow) => {
 243                         cy.get('main').contains(testWorkflow.name).click();
 244                         cy.get('[data-cy=run-process-next-button]').click();
 245
 246                         cy.get('label').contains('directoryInputName').parent('div').find('input').click();
 247                         cy.get('div[role=dialog]')
 248                             .within(() => {
 249                                 // must use .then to avoid selecting instead of expanding https://github.com/cypress-io/cypress/issues/5529
 250                                 cy.get('p').contains('Home Projects').closest('ul')
 251                                     .find('i')
 252                                     .then(el => el.click());
 253
 254                                 cy.get(`[data-id=${testCollection.uuid}]`)
 255                                     .find('i').click();
 256
 257                                 cy.get(`[data-id="${testCollection.uuid}/subdir"]`)
 258                                     .find('i').click();
 259
 260                                 cy.contains('dir1').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 261                                 cy.contains('dir2').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 262
 263                                 cy.get('[data-cy=ok-button]').click();
 264                             });
 265
 266                         // Verify subdirectories were selected
 267                         cy.get('label').contains('directoryInputName').parent('div')
 268                             .within(() => {
 269                                 cy.contains('dir1');
 270                                 cy.contains('dir2');
 271                             });
 272
 273                         // Reopen tree picker and verify subdirectories are preselected
 274                         cy.get('label').contains('directoryInputName').parent('div').find('input').click();
 275                         cy.waitForDom().get('div[role=dialog]')
 276                             .within(() => {
 277                                 cy.contains('dir1').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').should('be.checked');
 278                                 cy.contains('dir2').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').should('be.checked');
 279                             });
 280                     });
 281
 282             });
 283     })
 284 })