3 class ArvadosModelTest < ActiveSupport::TestCase
6 def create_with_attrs attrs
7 a = Specimen.create({material: 'caloric'}.merge(attrs))
11 test 'non-admin cannot assign uuid' do
12 set_user_from_auth :active_trustedclient
13 want_uuid = Specimen.generate_uuid
14 a = create_with_attrs(uuid: want_uuid)
15 assert_nil a, "Non-admin should not assign uuid."
18 test 'admin can assign valid uuid' do
19 set_user_from_auth :admin_trustedclient
20 want_uuid = Specimen.generate_uuid
21 a = create_with_attrs(uuid: want_uuid)
22 assert_equal want_uuid, a.uuid, "Admin should assign valid uuid."
23 assert a.uuid.length==27, "Auto assigned uuid length is wrong."
26 test 'admin cannot assign uuid with wrong object type' do
27 set_user_from_auth :admin_trustedclient
28 want_uuid = Human.generate_uuid
29 a = create_with_attrs(uuid: want_uuid)
30 assert_nil a, "Admin should not be able to assign invalid uuid."
33 test 'admin cannot assign badly formed uuid' do
34 set_user_from_auth :admin_trustedclient
35 a = create_with_attrs(uuid: "ntoheunthaoesunhasoeuhtnsaoeunhtsth")
36 assert_nil a, "Admin should not be able to assign invalid uuid."
39 test 'admin cannot assign empty uuid' do
40 set_user_from_auth :admin_trustedclient
41 a = create_with_attrs(uuid: "")
42 assert_nil a, "Admin cannot assign empty uuid."
47 {:a => ['foo', 'bar']},
48 {'a' => [:foo, 'bar']},
49 {'a' => ['foo', :bar]},
51 {:a => {'foo' => {'bar' => 'baz'}}},
52 {'a' => {:foo => {'bar' => 'baz'}}},
53 {'a' => {'foo' => {:bar => 'baz'}}},
54 {'a' => {'foo' => {'bar' => :baz}}},
55 {'a' => {'foo' => ['bar', :baz]}},
56 {'a' => {['foo', :foo] => ['bar', 'baz']}},
58 test "refuse symbol keys in serialized attribute: #{x.inspect}" do
59 set_user_from_auth :admin_trustedclient
60 assert_nothing_raised do
61 Link.create!(link_class: 'test',
64 assert_raises ActiveRecord::RecordInvalid do
65 Link.create!(link_class: 'test',
71 test "Stringify symbols coming from serialized attribute in database" do
72 set_user_from_auth :admin_trustedclient
73 fixed = Link.find_by_uuid(links(:has_symbol_keys_in_database_somehow).uuid)
74 assert_equal(["baz", "foo"], fixed.properties.keys.sort,
75 "Hash symbol keys from DB did not get stringified.")
76 assert_equal(['waz', 'waz', 'waz', 1, nil, false, true],
77 fixed.properties['baz'],
78 "Array symbol values from DB did not get stringified.")
79 assert_equal true, fixed.save, "Failed to save fixed model back to db."
82 test "No HashWithIndifferentAccess in database" do
83 set_user_from_auth :admin_trustedclient
84 assert_raises ActiveRecord::RecordInvalid do
85 Link.create!(link_class: 'test',
86 properties: {'foo' => 'bar'}.with_indifferent_access)
90 test "store long string" do
91 set_user_from_auth :active
93 while longstring.length < 2**16
94 longstring = longstring + longstring
96 g = Group.create! name: 'Has a long description', description: longstring
97 g = Group.find_by_uuid g.uuid
98 assert_equal g.description, longstring
101 [['uuid', {unique: true}],
102 ['owner_uuid', {}]].each do |the_column, requires|
103 test "unique index on all models with #{the_column}" do
105 ActiveRecord::Base.connection.tables.each do |table|
106 columns = ActiveRecord::Base.connection.columns(table)
108 next unless columns.collect(&:name).include? the_column
110 indexes = ActiveRecord::Base.connection.indexes(table).reject do |index|
111 requires.map do |key, val|
112 index.send(key) == val
115 assert_includes indexes.collect(&:columns), [the_column], 'no index'
118 # Sanity check: make sure we didn't just systematically miss everything.
119 assert_operator(10, :<, checked,
120 "Only #{checked} tables have a #{the_column}?!")
124 test "search index exists on models that go into projects" do
125 all_tables = ActiveRecord::Base.connection.tables
126 all_tables.delete 'schema_migrations'
128 all_tables.each do |table|
129 table_class = table.classify.constantize
130 if table_class.respond_to?('searchable_columns')
131 search_index_columns = table_class.searchable_columns('ilike')
132 # Disappointing, but text columns aren't indexed yet.
133 search_index_columns -= table_class.columns.select { |c|
134 c.type == :text or c.name == 'description' or c.name == 'file_names'
137 indexes = ActiveRecord::Base.connection.indexes(table)
138 search_index_by_columns = indexes.select do |index|
139 index.columns.sort == search_index_columns.sort
141 search_index_by_name = indexes.select do |index|
142 index.name == "#{table}_search_index"
144 assert !search_index_by_columns.empty?, "#{table} has no search index with columns #{search_index_columns}. Instead found search index with columns #{search_index_by_name.first.andand.columns}"
149 test "full text search index exists on models" do
150 fts_tables = ["collections", "container_requests", "groups", "jobs",
151 "pipeline_instances", "pipeline_templates", "workflows"]
152 fts_tables.each do |table|
153 table_class = table.classify.constantize
154 if table_class.respond_to?('full_text_searchable_columns')
155 fts_index_columns = table_class.full_text_searchable_columns
157 indexes = ActiveRecord::Base.connection.indexes(table)
158 fts_index_by_columns = indexes.select do |index|
159 if index.columns.first.match(/to_tsvector/)
160 index_columns = index.columns.first.scan(/\((?<columns>[A-Za-z_]+)\,/).flatten!
161 index_columns.sort == fts_index_columns.sort
166 assert !fts_index_by_columns.empty?, "#{table} has no FTS index with columns #{fts_index_columns}. Instead found FTS index with columns #{index_columns}"
171 test "selectable_attributes includes database attributes" do
172 assert_includes(Job.selectable_attributes, "success")
175 test "selectable_attributes includes non-database attributes" do
176 assert_includes(Job.selectable_attributes, "node_uuids")
179 test "selectable_attributes includes common attributes in extensions" do
180 assert_includes(Job.selectable_attributes, "uuid")
183 test "selectable_attributes does not include unexposed attributes" do
184 refute_includes(Job.selectable_attributes, "nodes")
187 test "selectable_attributes on a non-default template" do
188 attr_a = Job.selectable_attributes(:common)
189 assert_includes(attr_a, "uuid")
190 refute_includes(attr_a, "success")
193 test 'create and retrieve using created_at time' do
194 set_user_from_auth :active
195 group = Group.create! name: 'test create and retrieve group'
196 assert group.valid?, "group is not valid"
198 results = Group.where(created_at: group.created_at)
199 assert_includes results.map(&:uuid), group.uuid,
200 "Expected new group uuid in results when searched with its created_at timestamp"
203 test 'create and update twice and expect different update times' do
204 set_user_from_auth :active
205 group = Group.create! name: 'test create and retrieve group'
206 assert group.valid?, "group is not valid"
209 group.update_attributes!(name: "test create and update name 1")
210 results = Group.where(uuid: group.uuid)
211 assert_equal "test create and update name 1", results.first.name, "Expected name to be updated to 1"
212 updated_at_1 = results.first.updated_at.to_f
215 group.update_attributes!(name: "test create and update name 2")
216 results = Group.where(uuid: group.uuid)
217 assert_equal "test create and update name 2", results.first.name, "Expected name to be updated to 2"
218 updated_at_2 = results.first.updated_at.to_f
220 assert_equal true, (updated_at_2 > updated_at_1), "Expected updated time 2 to be newer than 1"