services/workbench2/cypress/e2e/create-workflow.cy.js

   1 // Copyright (C) The Arvados Authors. All rights reserved.
   2 //
   3 // SPDX-License-Identifier: AGPL-3.0
   4
   5 describe('Create workflow tests', function () {
   6     let activeUser;
   7     let adminUser;
   8
   9     before(function () {
  10         cy.getUser('admin', 'Admin', 'User', true, true)
  11             .as('adminUser').then(function () {
  12                 adminUser = this.adminUser;
  13             }
  14             );
  15         cy.getUser('collectionuser1', 'Collection', 'User', false, true)
  16             .as('activeUser').then(function () {
  17                 activeUser = this.activeUser;
  18             }
  19             );
  20     });
  21
  22     it('can create project with nested data', function () {
  23         cy.createGroup(adminUser.token, {
  24             group_class: "project",
  25             name: `Test project (${Math.floor(Math.random() * 999999)})`,
  26         }).as('project1');
  27
  28         cy.get('@project1').then(() => {
  29             cy.createGroup(adminUser.token, {
  30                 group_class: "project",
  31                 name: `Test project (${Math.floor(Math.random() * 999999)})`,
  32                 owner_uuid: this.project1.uuid,
  33             }).as('project2');
  34         })
  35
  36         cy.get('@project2').then(() => {
  37             cy.createGroup(adminUser.token, {
  38                 group_class: "project",
  39                 name: `Test project (${Math.floor(Math.random() * 999999)})`,
  40                 owner_uuid: this.project2.uuid,
  41             }).as('project3');
  42         });
  43
  44         cy.get('@project3').then(() => {
  45             cy.createWorkflow(adminUser.token, {
  46                 name: `TestWorkflow${Math.floor(Math.random() * 999999)}.cwl`,
  47                 definition: "{\n    \"$graph\": [\n        {\n            \"class\": \"Workflow\",\n            \"doc\": \"Reverse the lines in a document, then sort those lines.\",\n            \"hints\": [\n                {\n                    \"acrContainerImage\": \"99b0201f4cade456b4c9d343769a3b70+261\",\n                    \"class\": \"http://arvados.org/cwl#WorkflowRunnerResources\"\n                }\n            ],\n            \"id\": \"#main\",\n            \"inputs\": [\n                {\n                    \"default\": null,\n                    \"doc\": \"The input file to be processed.\",\n                    \"id\": \"#main/input\",\n                    \"type\": \"File\"\n                },\n                {\n                    \"default\": true,\n                    \"doc\": \"If true, reverse (decending) sort\",\n                    \"id\": \"#main/reverse_sort\",\n                    \"type\": \"boolean\"\n                }\n            ],\n            \"outputs\": [\n                {\n                    \"doc\": \"The output with the lines reversed and sorted.\",\n                    \"id\": \"#main/output\",\n                    \"outputSource\": \"#main/sorted/output\",\n                    \"type\": \"File\"\n                }\n            ],\n            \"steps\": [\n                {\n                    \"id\": \"#main/rev\",\n                    \"in\": [\n                        {\n                            \"id\": \"#main/rev/input\",\n                            \"source\": \"#main/input\"\n                        }\n                    ],\n                    \"out\": [\n                        \"#main/rev/output\"\n                    ],\n                    \"run\": \"#revtool.cwl\"\n                },\n                {\n                    \"id\": \"#main/sorted\",\n                    \"in\": [\n                        {\n                            \"id\": \"#main/sorted/input\",\n                            \"source\": \"#main/rev/output\"\n                        },\n                        {\n                            \"id\": \"#main/sorted/reverse\",\n                            \"source\": \"#main/reverse_sort\"\n                        }\n                    ],\n                    \"out\": [\n                        \"#main/sorted/output\"\n                    ],\n                    \"run\": \"#sorttool.cwl\"\n                }\n            ]\n        },\n        {\n            \"baseCommand\": \"rev\",\n            \"class\": \"CommandLineTool\",\n            \"doc\": \"Reverse each line using the `rev` command\",\n            \"hints\": [\n                {\n                    \"class\": \"ResourceRequirement\",\n                    \"ramMin\": 8\n                }\n            ],\n            \"id\": \"#revtool.cwl\",\n            \"inputs\": [\n                {\n                    \"id\": \"#revtool.cwl/input\",\n                    \"inputBinding\": {},\n                    \"type\": \"File\"\n                }\n            ],\n            \"outputs\": [\n                {\n                    \"id\": \"#revtool.cwl/output\",\n                    \"outputBinding\": {\n                        \"glob\": \"output.txt\"\n                    },\n                    \"type\": \"File\"\n                }\n            ],\n            \"stdout\": \"output.txt\"\n        },\n        {\n            \"baseCommand\": \"sort\",\n            \"class\": \"CommandLineTool\",\n            \"doc\": \"Sort lines using the `sort` command\",\n            \"hints\": [\n                {\n                    \"class\": \"ResourceRequirement\",\n                    \"ramMin\": 8\n                }\n            ],\n            \"id\": \"#sorttool.cwl\",\n            \"inputs\": [\n                {\n                    \"id\": \"#sorttool.cwl/reverse\",\n                    \"inputBinding\": {\n                        \"position\": 1,\n                        \"prefix\": \"-r\"\n                    },\n                    \"type\": \"boolean\"\n                },\n                {\n                    \"id\": \"#sorttool.cwl/input\",\n                    \"inputBinding\": {\n                        \"position\": 2\n                    },\n                    \"type\": \"File\"\n                }\n            ],\n            \"outputs\": [\n                {\n                    \"id\": \"#sorttool.cwl/output\",\n                    \"outputBinding\": {\n                        \"glob\": \"output.txt\"\n                    },\n                    \"type\": \"File\"\n                }\n            ],\n            \"stdout\": \"output.txt\"\n        }\n    ],\n    \"cwlVersion\": \"v1.0\"\n}",
  48             })
  49                 .as('testWorkflow');
  50
  51             cy.createCollection(adminUser.token, {
  52                 name: `Test collection ${Math.floor(Math.random() * 999999)}`,
  53                 owner_uuid: this.project3.uuid,
  54                 manifest_text: "./subdir 37b51d194a7513e45b56f6524f2d51f2+3 0:3:foo\n. 37b51d194a7513e45b56f6524f2d51f2+3 0:3:baz\n"
  55             })
  56                 .as('testCollection');
  57         });
  58
  59         cy.get('@testWorkflow').then(() => {
  60             cy.loginAs(adminUser);
  61
  62             cy.get('[data-cy=side-panel-button]').click();
  63             cy.get('[data-cy=side-panel-run-process]').click();
  64
  65             cy.get('.layout-pane')
  66                 .contains(this.testWorkflow.name)
  67                 .click();
  68
  69             cy.get('[data-cy=run-process-next-button]').click();
  70
  71             cy.get('[data-cy=new-process-panel]').contains('Run workflow').should('be.disabled');
  72
  73             cy.get('[data-cy=new-process-panel]')
  74                 .within(() => {
  75                     cy.get('[name=name]').type(`Workflow name (${Math.floor(Math.random() * 999999)})`);
  76                     cy.contains('input').next().click();
  77                 });
  78
  79             cy.get('[data-cy=choose-a-file-dialog]').as('chooseFileDialog');
  80             cy.get('@chooseFileDialog').contains('Home Projects').closest('ul').find('i').click();
  81
  82             cy.get('@project1').then((project1) => {
  83                 cy.get('@chooseFileDialog').find(`[data-id=${project1.uuid}]`).find('i').click();
  84             });
  85
  86             cy.get('@project2').then((project2) => {
  87                 cy.get('@chooseFileDialog').find(`[data-id=${project2.uuid}]`).find('i').click();
  88             });
  89
  90             cy.get('@project3').then((project3) => {
  91                 cy.get('@chooseFileDialog').find(`[data-id=${project3.uuid}]`).find('i').click();
  92             });
  93
  94             cy.get('@testCollection').then((testCollection) => {
  95                 cy.get('@chooseFileDialog').find(`[data-id=${testCollection.uuid}]`).find('i').click();
  96             });
  97
  98             cy.get('@chooseFileDialog').contains('baz').click();
  99
 100             cy.get('@chooseFileDialog').find('button').contains('Ok').click();
 101
 102             cy.get('[data-cy=new-process-panel]')
 103                 .find('button').contains('Run workflow').should('not.be.disabled');
 104         });
 105     });
 106
 107     ['workflow_with_array_fields.yaml', 'workflow_with_default_array_fields.yaml'].forEach((yamlfile) =>
 108     it('can select multi files when creating workflow '+yamlfile, () => {
 109         cy.createProject({
 110             owningUser: activeUser,
 111             projectName: 'myProject1',
 112             addToFavorites: true
 113         });
 114
 115         cy.createCollection(adminUser.token, {
 116             name: `Test collection ${Math.floor(Math.random() * 999999)}`,
 117             owner_uuid: activeUser.user.uuid,
 118             manifest_text: ". 37b51d194a7513e45b56f6524f2d51f2+3 0:3:bar\n. 37b51d194a7513e45b56f6524f2d51f2+3 0:3:baz\n"
 119         })
 120             .as('testCollection');
 121
 122         cy.createCollection(adminUser.token, {
 123             name: `Test collection ${Math.floor(Math.random() * 999999)}`,
 124             owner_uuid: activeUser.user.uuid,
 125             manifest_text: `. 37b51d194a7513e45b56f6524f2d51f2+3 0:3:buz\n`
 126         })
 127             .as('testCollection2');
 128
 129         cy.getAll('@myProject1', '@testCollection', '@testCollection2')
 130             .then(function ([myProject1, testCollection, testCollection2]) {
 131                 cy.readFile('cypress/fixtures/'+yamlfile).then(workflow => {
 132                     cy.createWorkflow(adminUser.token, {
 133                         name: `TestWorkflow${Math.floor(Math.random() * 999999)}.cwl`,
 134                         definition: workflow,
 135                         owner_uuid: myProject1.uuid,
 136                     })
 137                         .as('testWorkflow');
 138                 });
 139
 140                 cy.loginAs(activeUser);
 141
 142                 cy.get('main').contains(myProject1.name).click();
 143
 144                 cy.get('[data-cy=side-panel-button]').click();
 145
 146                 cy.get('#aside-menu-list').contains('Run a workflow').click();
 147
 148                 cy.get('@testWorkflow')
 149                     .then((testWorkflow) => {
 150                         cy.get('main').contains(testWorkflow.name).click();
 151                         cy.get('[data-cy=run-process-next-button]').click();
 152
 153                         cy.get('label').contains('foo').parent('div').find('input').click();
 154                         cy.get('div[role=dialog]')
 155                             .within(() => {
 156                                 // must use .then to avoid selecting instead of expanding https://github.com/cypress-io/cypress/issues/5529
 157                                 cy.get('p').contains('Home Projects').closest('ul')
 158                                     .find('i')
 159                                     .then(el => el.click());
 160
 161                                 cy.get(`[data-id=${testCollection.uuid}]`)
 162                                     .find('i').click();
 163
 164                                 cy.wait(1000);
 165                                 cy.contains('bar').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 166                                 cy.contains('baz').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 167
 168                                 cy.get('[data-cy=ok-button]').click();
 169                             });
 170
 171                         cy.get('label').contains('bar').parent('div').find('input').click();
 172                         cy.get('div[role=dialog]')
 173                             .within(() => {
 174                                 // must use .then to avoid selecting instead of expanding https://github.com/cypress-io/cypress/issues/5529
 175                                 cy.get('p').contains('Home Projects').closest('ul')
 176                                     .find('i')
 177                                     .then(el => el.click());
 178
 179                                 cy.get(`[data-id=${testCollection.uuid}]`)
 180                                     .find('input[type=checkbox]').click();
 181
 182                                 cy.get(`[data-id=${testCollection2.uuid}]`)
 183                                     .find('input[type=checkbox]').click();
 184
 185                                 cy.get('[data-cy=ok-button]').click();
 186                             });
 187                     });
 188
 189                 cy.get('label').contains('foo').parent('div')
 190                     .within(() => {
 191                         cy.contains('baz');
 192                         cy.contains('bar');
 193                     });
 194
 195                 cy.get('label').contains('bar').parent('div')
 196                     .within(() => {
 197                         cy.contains(testCollection.name);
 198                         cy.contains(testCollection2.name);
 199                     });
 200             });
 201     }));
 202
 203     it('allows selecting collection subdirectories and reselects existing selections', () => {
 204         cy.createProject({
 205             owningUser: activeUser,
 206             projectName: 'myProject1',
 207             addToFavorites: true
 208         });
 209
 210         cy.createCollection(adminUser.token, {
 211             name: `Test collection ${Math.floor(Math.random() * 999999)}`,
 212             owner_uuid: activeUser.user.uuid,
 213             manifest_text: "./subdir/dir1 d41d8cd98f00b204e9800998ecf8427e+0 0:0:\\056\n./subdir/dir2 d41d8cd98f00b204e9800998ecf8427e+0 0:0:\\056\n"
 214         })
 215             .as('testCollection');
 216
 217         cy.getAll('@myProject1', '@testCollection')
 218             .then(function ([myProject1, testCollection]) {
 219                 cy.readFile('cypress/fixtures/workflow_directory_array.yaml').then(workflow => {
 220                     cy.createWorkflow(adminUser.token, {
 221                         name: `TestWorkflow${Math.floor(Math.random() * 999999)}.cwl`,
 222                         definition: workflow,
 223                         owner_uuid: myProject1.uuid,
 224                     })
 225                         .as('testWorkflow');
 226                 });
 227
 228                 cy.loginAs(activeUser);
 229
 230                 cy.get('main').contains(myProject1.name).click();
 231
 232                 cy.get('[data-cy=side-panel-button]').click();
 233
 234                 cy.get('#aside-menu-list').contains('Run a workflow').click();
 235
 236                 cy.get('@testWorkflow')
 237                     .then((testWorkflow) => {
 238                         cy.get('main').contains(testWorkflow.name).click();
 239                         cy.get('[data-cy=run-process-next-button]').click();
 240
 241                         cy.get('label').contains('directoryInputName').parent('div').find('input').click();
 242                         cy.get('div[role=dialog]')
 243                             .within(() => {
 244                                 // must use .then to avoid selecting instead of expanding https://github.com/cypress-io/cypress/issues/5529
 245                                 cy.get('p').contains('Home Projects').closest('ul')
 246                                     .find('i')
 247                                     .then(el => el.click());
 248
 249                                 cy.get(`[data-id=${testCollection.uuid}]`)
 250                                     .find('i').click();
 251
 252                                 cy.get(`[data-id="${testCollection.uuid}/subdir"]`)
 253                                     .find('i').click();
 254
 255                                 cy.contains('dir1').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 256                                 cy.contains('dir2').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').click();
 257
 258                                 cy.get('[data-cy=ok-button]').click();
 259                             });
 260
 261                         // Verify subdirectories were selected
 262                         cy.get('label').contains('directoryInputName').parent('div')
 263                             .within(() => {
 264                                 cy.contains('dir1');
 265                                 cy.contains('dir2');
 266                             });
 267
 268                         // Reopen tree picker and verify subdirectories are preselected
 269                         cy.get('label').contains('directoryInputName').parent('div').find('input').click();
 270                         cy.waitForDom().get('div[role=dialog]')
 271                             .within(() => {
 272                                 cy.contains('dir1').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').should('be.checked');
 273                                 cy.contains('dir2').closest('[data-action=TOGGLE_ACTIVE]').parent().find('input[type=checkbox]').should('be.checked');
 274                             });
 275                     });
 276
 277             });
 278     })
 279 })