1 // Copyright (C) The Arvados Authors. All rights reserved.
3 // SPDX-License-Identifier: AGPL-3.0
5 import { ContainerState } from "models/container";
7 describe("Process tests", function () {
12 // Only set up common users once. These aren't set up as aliases because
13 // aliases are cleaned up after every test. Also it doesn't make sense
14 // to set the same users on beforeEach() over and over again, so we
15 // separate a little from Cypress' 'Best Practices' here.
16 cy.getUser("admin", "Admin", "User", true, true)
19 adminUser = this.adminUser;
21 cy.getUser("user", "Active", "User", false, true)
24 activeUser = this.activeUser;
28 function setupDockerImage(image_name) {
29 // Create a collection that will be used as a docker image for the tests.
30 cy.createCollection(adminUser.token, {
33 ". d21353cfe035e3e384563ee55eadbb2f+67108864 5c77a43e329b9838cbec18ff42790e57+55605760 0:122714624:sha256:d8309758b8fe2c81034ffc8a10c36460b77db7bc5e7b448c4e5b684f9d95a678.tar\n",
36 .then(function (dockerImage) {
37 // Give read permissions to the active user on the docker image.
38 cy.createLink(adminUser.token, {
39 link_class: "permission",
41 tail_uuid: activeUser.user.uuid,
42 head_uuid: dockerImage.uuid,
44 .as("dockerImagePermission")
46 // Set-up docker image collection tags
47 cy.createLink(activeUser.token, {
48 link_class: "docker_image_repo+tag",
50 head_uuid: dockerImage.uuid,
51 }).as("dockerImageRepoTag");
52 cy.createLink(activeUser.token, {
53 link_class: "docker_image_hash",
54 name: "sha256:d8309758b8fe2c81034ffc8a10c36460b77db7bc5e7b448c4e5b684f9d95a678",
55 head_uuid: dockerImage.uuid,
56 }).as("dockerImageHash");
59 return cy.getAll("@dockerImage", "@dockerImageRepoTag", "@dockerImageHash", "@dockerImagePermission").then(function ([dockerImage]) {
64 function createContainerRequest(user, name, docker_image, command, reuse = false, state = "Uncommitted") {
65 return setupDockerImage(docker_image).then(function (dockerImage) {
66 return cy.createContainerRequest(user.token, {
69 container_image: dockerImage.portable_data_hash, // for some reason, docker_image doesn't work here
70 output_path: "stdout.txt",
72 runtime_constraints: {
88 describe('Multiselect Toolbar', () => {
89 it('shows the appropriate buttons in the toolbar', () => {
91 const msButtonTooltips = [
97 'Copy and re-run process',
103 createContainerRequest(
105 `test_container_request ${Math.floor(Math.random() * 999999)}`,
107 ["echo", "hello world"],
110 ).then(function (containerRequest) {
111 cy.loginAs(activeUser);
112 cy.goToPath(`/processes/${containerRequest.uuid}`);
113 cy.get("[data-cy=process-details]").should("contain", containerRequest.name);
114 cy.get("[data-cy=process-details-attributes-modifiedby-user]").contains(`Active User (${activeUser.user.uuid})`);
115 cy.get("[data-cy=process-details-attributes-runtime-user]").should("not.exist");
116 cy.get("[data-cy=side-panel-tree]").contains("Home Projects").click();
118 cy.get('[data-cy=data-table-row]').contains(containerRequest.name).should('exist').parent().parent().parent().parent().click()
120 cy.get('[data-cy=multiselect-button]').should('have.length', msButtonTooltips.length)
121 for (let i = 0; i < msButtonTooltips.length; i++) {
122 cy.get('[data-cy=multiselect-button]').eq(i).trigger('mouseover');
123 cy.get('body').contains(msButtonTooltips[i]).should('exist')
124 cy.get('[data-cy=multiselect-button]').eq(i).trigger('mouseout');
130 describe("Details panel", function () {
131 it("shows process details", function () {
132 createContainerRequest(
134 `test_container_request ${Math.floor(Math.random() * 999999)}`,
136 ["echo", "hello world"],
139 ).then(function (containerRequest) {
140 cy.loginAs(activeUser);
141 cy.goToPath(`/processes/${containerRequest.uuid}`);
142 cy.get("[data-cy=process-details]").should("contain", containerRequest.name);
143 cy.get("[data-cy=process-details-attributes-modifiedby-user]").contains(`Active User (${activeUser.user.uuid})`);
144 cy.get("[data-cy=process-details-attributes-runtime-user]").should("not.exist");
147 // Fake submitted by another user
148 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
149 req.on('response', res => {
150 res.body.modified_by_user_uuid = "zzzzz-tpzed-000000000000000";
154 createContainerRequest(
156 `test_container_request ${Math.floor(Math.random() * 999999)}`,
158 ["echo", "hello world"],
161 ).then(function (containerRequest) {
162 cy.loginAs(activeUser);
163 cy.goToPath(`/processes/${containerRequest.uuid}`);
164 cy.get("[data-cy=process-details]").should("contain", containerRequest.name);
165 cy.get("[data-cy=process-details-attributes-modifiedby-user]").contains(`zzzzz-tpzed-000000000000000`);
166 cy.get("[data-cy=process-details-attributes-runtime-user]").contains(`Active User (${activeUser.user.uuid})`);
170 it("should show runtime status indicators", function () {
171 // Setup running container with runtime_status error & warning messages
172 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed")
173 .as("containerRequest")
174 .then(function (containerRequest) {
175 expect(containerRequest.state).to.equal("Committed");
176 expect(containerRequest.container_uuid).not.to.be.equal("");
178 cy.getContainer(activeUser.token, containerRequest.container_uuid).then(function (queuedContainer) {
179 expect(queuedContainer.state).to.be.equal("Queued");
181 cy.updateContainer(adminUser.token, containerRequest.container_uuid, {
183 }).then(function (lockedContainer) {
184 expect(lockedContainer.state).to.be.equal("Locked");
186 cy.updateContainer(adminUser.token, lockedContainer.uuid, {
189 error: "Something went wrong",
190 errorDetail: "Process exited with status 1",
191 warning: "Free disk space is low",
194 .as("runningContainer")
195 .then(function (runningContainer) {
196 expect(runningContainer.state).to.be.equal("Running");
197 expect(runningContainer.runtime_status).to.be.deep.equal({
198 error: "Something went wrong",
199 errorDetail: "Process exited with status 1",
200 warning: "Free disk space is low",
205 // Test that the UI shows the error and warning messages
206 cy.getAll("@containerRequest", "@runningContainer").then(function ([containerRequest]) {
207 cy.loginAs(activeUser);
208 cy.goToPath(`/processes/${containerRequest.uuid}`);
209 cy.get("[data-cy=process-runtime-status-error]")
210 .should("contain", "Something went wrong")
211 .and("contain", "Process exited with status 1");
212 cy.get("[data-cy=process-runtime-status-warning]")
213 .should("contain", "Free disk space is low")
214 .and("contain", "No additional warning details available");
217 // Force container_count for testing
218 let containerCount = 2;
219 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
220 req.on('response', res => {
221 res.body.container_count = containerCount;
225 cy.getAll("@containerRequest").then(function ([containerRequest]) {
226 cy.goToPath(`/processes/${containerRequest.uuid}`);
227 cy.get("[data-cy=process-runtime-status-retry-warning]", { timeout: 7000 }).should("contain", "Process retried 1 time");
230 cy.getAll("@containerRequest").then(function ([containerRequest]) {
232 cy.goToPath(`/processes/${containerRequest.uuid}`);
233 cy.get("[data-cy=process-runtime-status-retry-warning]", { timeout: 7000 }).should("contain", "Process retried 2 times");
237 it("allows copying processes", function () {
238 const crName = "first_container_request";
239 const copiedCrName = "copied_container_request";
240 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
241 cy.loginAs(activeUser);
242 cy.goToPath(`/processes/${containerRequest.uuid}`);
243 cy.get("[data-cy=process-details]").should("contain", crName);
245 cy.get("[data-cy=process-details]").find('button[title="More options"]').click();
246 cy.get("ul[data-cy=context-menu]").contains("Copy and re-run process").click();
249 cy.get("[data-cy=form-dialog]").within(() => {
250 cy.get("input[name=name]").clear().type(copiedCrName);
251 cy.get("[data-cy=projects-tree-home-tree-picker]").click();
252 cy.get("[data-cy=form-submit-btn]").click();
255 cy.get("[data-cy=process-details]").should("contain", copiedCrName);
256 cy.get("[data-cy=process-details]").find("button").contains("Run");
259 const getFakeContainer = fakeContainerUuid => ({
260 href: `/containers/${fakeContainerUuid}`,
261 kind: "arvados#container",
262 etag: "ecfosljpnxfari9a8m7e4yv06",
263 uuid: fakeContainerUuid,
264 owner_uuid: "zzzzz-tpzed-000000000000000",
265 created_at: "2023-02-13T15:55:47.308915000Z",
266 modified_by_client_uuid: "zzzzz-ozdt8-q6dzdi1lcc03155",
267 modified_by_user_uuid: "zzzzz-tpzed-000000000000000",
268 modified_at: "2023-02-15T19:12:45.987086000Z",
270 "arvados-cwl-runner",
273 "--project-uuid=zzzzz-j7d0g-yr18k784zplfeza",
274 "/var/lib/cwl/workflow.json#main",
275 "/var/lib/cwl/cwl.input.json",
277 container_image: "4ad7d11381df349e464694762db14e04+303",
278 cwd: "/var/spool/cwl",
282 locked_by_uuid: null,
285 output_path: "/var/spool/cwl",
287 runtime_constraints: {
292 hardware_capability: "",
294 keep_cache_disk: 2147483648,
302 scheduling_parameters: {
307 runtime_user_uuid: "zzzzz-tpzed-vllbpebicy84rd5",
308 runtime_auth_scopes: ["all"],
310 gateway_address: null,
311 interactive_session_started: false,
312 output_storage_classes: ["default"],
313 output_properties: {},
315 subrequests_cost: 0.0,
318 it("shows cancel button when appropriate", function () {
319 // Ignore collection requests
321 { method: "GET", url: `**/arvados/v1/collections/*` },
328 // Uncommitted container
329 const crUncommitted = `Test process ${Math.floor(Math.random() * 999999)}`;
330 createContainerRequest(activeUser, crUncommitted, "arvados/jobs", ["echo", "hello world"], false, "Uncommitted").then(function (
333 cy.loginAs(activeUser);
334 // Navigate to process and verify run / cancel button
335 cy.goToPath(`/processes/${containerRequest.uuid}`);
337 cy.get("[data-cy=process-details]").should("contain", crUncommitted);
338 cy.get("[data-cy=process-run-button]").should("exist");
339 cy.get("[data-cy=process-cancel-button]").should("not.exist");
343 const crQueued = `Test process ${Math.floor(Math.random() * 999999)}`;
344 const fakeCrUuid = "zzzzz-dz642-000000000000001";
345 createContainerRequest(activeUser, crQueued, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
348 // Fake container uuid
349 cy.intercept({ method: "GET", url: `**/arvados/v1/container_requests/${containerRequest.uuid}` }, req => {
350 req.on('response', res => {
351 res.body.output_uuid = fakeCrUuid;
352 res.body.priority = 500;
353 res.body.state = "Committed";
358 const container = getFakeContainer(fakeCrUuid);
360 { method: "GET", url: `**/arvados/v1/container/${fakeCrUuid}` },
363 body: { ...container, state: "Queued", priority: 500 },
367 // Navigate to process and verify cancel button
368 cy.goToPath(`/processes/${containerRequest.uuid}`);
370 cy.get("[data-cy=process-details]").should("contain", crQueued);
371 cy.get("[data-cy=process-cancel-button]").contains("Cancel");
375 const crLocked = `Test process ${Math.floor(Math.random() * 999999)}`;
376 const fakeCrLockedUuid = "zzzzz-dz642-000000000000002";
377 createContainerRequest(activeUser, crLocked, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
380 // Fake container uuid
381 cy.intercept({ method: "GET", url: `**/arvados/v1/container_requests/${containerRequest.uuid}` }, req => {
382 req.on('response', res => {
383 res.body.output_uuid = fakeCrLockedUuid;
384 res.body.priority = 500;
385 res.body.state = "Committed";
390 const container = getFakeContainer(fakeCrLockedUuid);
392 { method: "GET", url: `**/arvados/v1/container/${fakeCrLockedUuid}` },
395 body: { ...container, state: "Locked", priority: 500 },
399 // Navigate to process and verify cancel button
400 cy.goToPath(`/processes/${containerRequest.uuid}`);
402 cy.get("[data-cy=process-details]").should("contain", crLocked);
403 cy.get("[data-cy=process-cancel-button]").contains("Cancel");
407 const crOnHold = `Test process ${Math.floor(Math.random() * 999999)}`;
408 const fakeCrOnHoldUuid = "zzzzz-dz642-000000000000003";
409 createContainerRequest(activeUser, crOnHold, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
412 // Fake container uuid
413 cy.intercept({ method: "GET", url: `**/arvados/v1/container_requests/${containerRequest.uuid}` }, req => {
414 req.on('response', res => {
415 res.body.output_uuid = fakeCrOnHoldUuid;
416 res.body.priority = 0;
417 res.body.state = "Committed";
422 const container = getFakeContainer(fakeCrOnHoldUuid);
424 { method: "GET", url: `**/arvados/v1/container/${fakeCrOnHoldUuid}` },
427 body: { ...container, state: "Queued", priority: 0 },
431 // Navigate to process and verify cancel button
432 cy.goToPath(`/processes/${containerRequest.uuid}`);
434 cy.get("[data-cy=process-details]").should("contain", crOnHold);
435 cy.get("[data-cy=process-run-button]").should("exist");
436 cy.get("[data-cy=process-cancel-button]").should("not.exist");
441 describe("Logs panel", function () {
442 it("shows live process logs", function () {
443 cy.intercept({ method: "GET", url: "**/arvados/v1/containers/*" }, req => {
444 req.on('response', res => {
445 res.body.state = ContainerState.RUNNING;
449 const crName = "test_container_request";
450 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
451 // Create empty log file before loading process page
452 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [""]);
454 cy.loginAs(activeUser);
455 cy.goToPath(`/processes/${containerRequest.uuid}`);
456 cy.get("[data-cy=process-details]").should("contain", crName);
457 cy.get("[data-cy=process-logs]").should("contain", "No logs yet").and("not.contain", "hello world");
460 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", ["2023-07-18T20:14:48.128642814Z hello world"]).then(() => {
461 cy.get("[data-cy=process-logs]", { timeout: 7000 }).should("not.contain", "No logs yet").and("contain", "hello world");
464 // Append new log line to different file
465 cy.appendLog(adminUser.token, containerRequest.uuid, "stderr.txt", ["2023-07-18T20:14:49.128642814Z hello new line"]).then(() => {
466 cy.get("[data-cy=process-logs]", { timeout: 7000 }).should("not.contain", "No logs yet").and("contain", "hello new line");
471 it("filters process logs by event type", function () {
472 const nodeInfoLogs = [
474 "Linux compute-99cb150b26149780de44b929577e1aed-19rgca8vobuvc4p 5.4.0-1059-azure #62~18.04.1-Ubuntu SMP Tue Sep 14 17:53:18 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux",
477 "vendor_id : GenuineIntel",
480 "model name : Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz",
482 const crunchRunLogs = [
483 "2022-03-22T13:56:22.542417997Z using local keepstore process (pid 3733) at http://localhost:46837, writing logs to keepstore.txt in log collection",
484 "2022-03-22T13:56:26.237571754Z crunch-run 2.4.0~dev20220321141729 (go1.17.1) started",
485 "2022-03-22T13:56:26.244704134Z crunch-run process has uid=0(root) gid=0(root) groups=0(root)",
486 "2022-03-22T13:56:26.244862836Z Executing container 'zzzzz-dz642-1wokwvcct9s9du3' using docker runtime",
487 "2022-03-22T13:56:26.245037738Z Executing on host 'compute-99cb150b26149780de44b929577e1aed-19rgca8vobuvc4p'",
490 "2022-03-22T13:56:22.542417987Z Lorem ipsum dolor sit amet, consectetur adipiscing elit. Donec dui nisi, hendrerit porta sapien a, pretium dignissim purus.",
491 "2022-03-22T13:56:22.542417997Z Integer viverra, mauris finibus aliquet ultricies, dui mauris cursus justo, ut venenatis nibh ex eget neque.",
492 "2022-03-22T13:56:22.542418007Z In hac habitasse platea dictumst.",
493 "2022-03-22T13:56:22.542418027Z Fusce fringilla turpis id accumsan faucibus. Donec congue congue ex non posuere. In semper mi quis tristique rhoncus.",
494 "2022-03-22T13:56:22.542418037Z Interdum et malesuada fames ac ante ipsum primis in faucibus.",
495 "2022-03-22T13:56:22.542418047Z Quisque fermentum tortor ex, ut suscipit velit feugiat faucibus.",
496 "2022-03-22T13:56:22.542418057Z Donec vitae porta risus, at luctus nulla. Mauris gravida iaculis ipsum, id sagittis tortor egestas ac.",
497 "2022-03-22T13:56:22.542418067Z Maecenas condimentum volutpat nulla. Integer lacinia maximus risus eu posuere.",
498 "2022-03-22T13:56:22.542418077Z Donec vitae leo id augue gravida bibendum.",
499 "2022-03-22T13:56:22.542418087Z Nam libero libero, pretium ac faucibus elementum, mattis nec ex.",
500 "2022-03-22T13:56:22.542418097Z Nullam id laoreet nibh. Vivamus tellus metus, pretium quis justo ut, bibendum varius metus. Pellentesque vitae accumsan lorem, quis tincidunt augue.",
501 "2022-03-22T13:56:22.542418107Z Aliquam viverra nisi nulla, et efficitur dolor mattis in.",
502 "2022-03-22T13:56:22.542418117Z Sed at enim sit amet nulla tincidunt mattis. Aenean eget aliquet ex, non ultrices ex. Nulla ex tortor, vestibulum aliquam tempor ac, aliquam vel est.",
503 "2022-03-22T13:56:22.542418127Z Fusce auctor faucibus libero id venenatis. Etiam sodales, odio eu cursus efficitur, quam sem blandit ex, quis porttitor enim dui quis lectus. In id tincidunt felis.",
504 "2022-03-22T13:56:22.542418137Z Phasellus non ex quis arcu tempus faucibus molestie in sapien.",
505 "2022-03-22T13:56:22.542418147Z Duis tristique semper dolor, vitae pulvinar risus.",
506 "2022-03-22T13:56:22.542418157Z Aliquam tortor elit, luctus nec tortor eget, porta tristique nulla.",
507 "2022-03-22T13:56:22.542418167Z Nulla eget mollis ipsum.",
510 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
513 cy.appendLog(adminUser.token, containerRequest.uuid, "node-info.txt", nodeInfoLogs).as("nodeInfoLogs");
514 cy.appendLog(adminUser.token, containerRequest.uuid, "crunch-run.txt", crunchRunLogs).as("crunchRunLogs");
515 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", stdoutLogs).as("stdoutLogs");
517 cy.getAll("@stdoutLogs", "@nodeInfoLogs", "@crunchRunLogs").then(function () {
518 cy.loginAs(activeUser);
519 cy.goToPath(`/processes/${containerRequest.uuid}`);
520 // Should show main logs by default
521 cy.get("[data-cy=process-logs-filter]", { timeout: 7000 }).should("contain", "Main logs");
522 cy.get("[data-cy=process-logs]")
523 .should("contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
524 .and("not.contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
525 .and("contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
527 cy.get("[data-cy=process-logs-filter]").click();
528 cy.get("body").contains("li", "All logs").click();
529 cy.get("[data-cy=process-logs]")
530 .should("contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
531 .and("contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
532 .and("contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
533 // Select 'node-info' logs
534 cy.get("[data-cy=process-logs-filter]").click();
535 cy.get("body").contains("li", "node-info").click();
536 cy.get("[data-cy=process-logs]")
537 .should("not.contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
538 .and("contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
539 .and("not.contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
540 // Select 'stdout' logs
541 cy.get("[data-cy=process-logs-filter]").click();
542 cy.get("body").contains("li", "stdout").click();
543 cy.get("[data-cy=process-logs]")
544 .should("contain", stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
545 .and("not.contain", nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
546 .and("not.contain", crunchRunLogs[Math.floor(Math.random() * crunchRunLogs.length)]);
551 it("sorts combined logs", function () {
552 const crName = "test_container_request";
553 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
554 cy.appendLog(adminUser.token, containerRequest.uuid, "node-info.txt", [
562 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [
563 "2023-07-18T20:14:48.128642814Z first",
564 "2023-07-18T20:14:49.128642814Z third",
567 cy.appendLog(adminUser.token, containerRequest.uuid, "stderr.txt", ["2023-07-18T20:14:48.528642814Z second"]).as("stderr");
569 cy.loginAs(activeUser);
570 cy.goToPath(`/processes/${containerRequest.uuid}`);
571 cy.get("[data-cy=process-details]").should("contain", crName);
572 cy.get("[data-cy=process-logs]").should("contain", "No logs yet");
574 cy.getAll("@node-info", "@stdout", "@stderr").then(() => {
575 // Verify sorted main logs
576 cy.get("[data-cy=process-logs] span > p", { timeout: 7000 }).eq(0).should("contain", "2023-07-18T20:14:48.128642814Z first");
577 cy.get("[data-cy=process-logs] span > p").eq(1).should("contain", "2023-07-18T20:14:48.528642814Z second");
578 cy.get("[data-cy=process-logs] span > p").eq(2).should("contain", "2023-07-18T20:14:49.128642814Z third");
580 // Switch to All logs
581 cy.get("[data-cy=process-logs-filter]").click();
582 cy.get("body").contains("li", "All logs").click();
583 // Verify non-sorted lines were preserved
584 cy.get("[data-cy=process-logs] span > p").eq(0).should("contain", "3: nodeinfo 1");
585 cy.get("[data-cy=process-logs] span > p").eq(1).should("contain", "2: nodeinfo 2");
586 cy.get("[data-cy=process-logs] span > p").eq(2).should("contain", "1: nodeinfo 3");
587 cy.get("[data-cy=process-logs] span > p").eq(3).should("contain", "2: nodeinfo 4");
588 cy.get("[data-cy=process-logs] span > p").eq(4).should("contain", "3: nodeinfo 5");
589 // Verify sorted logs
590 cy.get("[data-cy=process-logs] span > p").eq(5).should("contain", "2023-07-18T20:14:48.128642814Z first");
591 cy.get("[data-cy=process-logs] span > p").eq(6).should("contain", "2023-07-18T20:14:48.528642814Z second");
592 cy.get("[data-cy=process-logs] span > p").eq(7).should("contain", "2023-07-18T20:14:49.128642814Z third");
597 it("preserves original ordering of lines within the same log type", function () {
598 const crName = "test_container_request";
599 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
600 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [
602 "2023-07-18T20:14:46.000000000Z A out 1",
603 // Comes fourth in a contiguous block
604 "2023-07-18T20:14:48.128642814Z A out 2",
605 "2023-07-18T20:14:48.128642814Z X out 3",
606 "2023-07-18T20:14:48.128642814Z A out 4",
609 cy.appendLog(adminUser.token, containerRequest.uuid, "stderr.txt", [
611 "2023-07-18T20:14:47.000000000Z Z err 1",
612 // Comes third in a contiguous block
613 "2023-07-18T20:14:48.128642814Z B err 2",
614 "2023-07-18T20:14:48.128642814Z C err 3",
615 "2023-07-18T20:14:48.128642814Z Y err 4",
616 "2023-07-18T20:14:48.128642814Z Z err 5",
617 "2023-07-18T20:14:48.128642814Z A err 6",
620 cy.loginAs(activeUser);
621 cy.goToPath(`/processes/${containerRequest.uuid}`);
622 cy.get("[data-cy=process-details]").should("contain", crName);
623 cy.get("[data-cy=process-logs]").should("contain", "No logs yet");
625 cy.getAll("@stdout", "@stderr").then(() => {
626 // Switch to All logs
627 cy.get("[data-cy=process-logs-filter]").click();
628 cy.get("body").contains("li", "All logs").click();
629 // Verify sorted logs
630 cy.get("[data-cy=process-logs] span > p").eq(0).should("contain", "2023-07-18T20:14:46.000000000Z A out 1");
631 cy.get("[data-cy=process-logs] span > p").eq(1).should("contain", "2023-07-18T20:14:47.000000000Z Z err 1");
632 cy.get("[data-cy=process-logs] span > p").eq(2).should("contain", "2023-07-18T20:14:48.128642814Z B err 2");
633 cy.get("[data-cy=process-logs] span > p").eq(3).should("contain", "2023-07-18T20:14:48.128642814Z C err 3");
634 cy.get("[data-cy=process-logs] span > p").eq(4).should("contain", "2023-07-18T20:14:48.128642814Z Y err 4");
635 cy.get("[data-cy=process-logs] span > p").eq(5).should("contain", "2023-07-18T20:14:48.128642814Z Z err 5");
636 cy.get("[data-cy=process-logs] span > p").eq(6).should("contain", "2023-07-18T20:14:48.128642814Z A err 6");
637 cy.get("[data-cy=process-logs] span > p").eq(7).should("contain", "2023-07-18T20:14:48.128642814Z A out 2");
638 cy.get("[data-cy=process-logs] span > p").eq(8).should("contain", "2023-07-18T20:14:48.128642814Z X out 3");
639 cy.get("[data-cy=process-logs] span > p").eq(9).should("contain", "2023-07-18T20:14:48.128642814Z A out 4");
644 it("correctly generates sniplines", function () {
645 const SNIPLINE = `================ ✀ ================ ✀ ========= Some log(s) were skipped ========= ✀ ================ ✀ ================`;
646 const crName = "test_container_request";
647 createContainerRequest(activeUser, crName, "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (containerRequest) {
648 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", [
649 "X".repeat(63999) + "_" + "O".repeat(100) + "_" + "X".repeat(63999),
652 cy.loginAs(activeUser);
653 cy.goToPath(`/processes/${containerRequest.uuid}`);
654 cy.get("[data-cy=process-details]").should("contain", crName);
655 cy.get("[data-cy=process-logs]").should("contain", "No logs yet");
657 // Switch to stdout since lines are unsortable (no timestamp)
658 cy.get("[data-cy=process-logs-filter]").click();
659 cy.get("body").contains("li", "stdout").click();
661 cy.getAll("@stdout").then(() => {
662 // Verify first 64KB and snipline
663 cy.get("[data-cy=process-logs] span > p", { timeout: 7000 })
665 .should("contain", "X".repeat(63999) + "_\n" + SNIPLINE);
667 cy.get("[data-cy=process-logs] span > p")
669 .should("contain", "_" + "X".repeat(63999));
670 // Verify none of the Os got through
671 cy.get("[data-cy=process-logs] span > p").should("not.contain", "O");
676 it("correctly break long lines when no obvious line separation exists", function () {
677 function randomString(length) {
678 const chars = 'ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789';
680 for (let i = 0; i < length; i++) {
681 res += chars.charAt(Math.floor(Math.random() * chars.length));
686 const logLinesQty = 10;
688 for (let i = 0; i < logLinesQty; i++) {
689 const length = Math.floor(Math.random() * 500) + 500;
690 logLines.push(randomString(length));
693 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").then(function (
696 cy.appendLog(adminUser.token, containerRequest.uuid, "stdout.txt", logLines).as("stdoutLogs");
698 cy.getAll("@stdoutLogs").then(function () {
699 cy.loginAs(activeUser);
700 cy.goToPath(`/processes/${containerRequest.uuid}`);
701 // Select 'stdout' log filter
702 cy.get("[data-cy=process-logs-filter]").click();
703 cy.get("body").contains("li", "stdout").click();
704 cy.get("[data-cy=process-logs] span > p")
705 .should('have.length', logLinesQty)
707 expect($p.text().length).to.be.greaterThan(499);
709 // This looks like an ugly hack, but I was not able
710 // to get [client|scroll]Width attributes through
711 // the usual Cypress methods.
712 const parentClientWidth = $p[0].parentElement.clientWidth;
713 const parentScrollWidth = $p[0].parentElement.scrollWidth
714 // Scrollbar should not be visible
715 expect(parentClientWidth).to.be.eq(parentScrollWidth);
722 describe("I/O panel", function () {
726 id: "#main/input_file",
727 label: "Label Description",
732 basename: "input1.tar",
734 location: "keep:00000000000000000000000000000000+01/input1.tar",
737 basename: "input1-2.txt",
739 location: "keep:00000000000000000000000000000000+01/input1-2.txt",
742 basename: "input1-3.txt",
744 location: "keep:00000000000000000000000000000000+01/input1-3.txt",
747 basename: "input1-4.txt",
749 location: "keep:00000000000000000000000000000000+01/input1-4.txt",
757 id: "#main/input_dir",
758 doc: "Doc Description",
763 basename: "11111111111111111111111111111111+01",
765 location: "keep:11111111111111111111111111111111+01",
771 id: "#main/input_bool",
772 doc: ["Doc desc 1", "Doc desc 2"],
781 id: "#main/input_int",
790 id: "#main/input_long",
799 id: "#main/input_float",
808 id: "#main/input_double",
817 id: "#main/input_string",
821 input_string: "Hello World",
826 id: "#main/input_file_array",
835 basename: "input2.tar",
837 location: "keep:00000000000000000000000000000000+02/input2.tar",
840 basename: "input3.tar",
842 location: "keep:00000000000000000000000000000000+03/input3.tar",
845 basename: "input3-2.txt",
847 location: "keep:00000000000000000000000000000000+03/input3-2.txt",
852 $import: "import_path",
859 id: "#main/input_dir_array",
868 basename: "11111111111111111111111111111111+02",
870 location: "keep:11111111111111111111111111111111+02",
873 basename: "11111111111111111111111111111111+03",
875 location: "keep:11111111111111111111111111111111+03",
878 $import: "import_path",
885 id: "#main/input_int_array",
897 $import: "import_path",
904 id: "#main/input_long_array",
915 $import: "import_path",
922 id: "#main/input_float_array",
934 $import: "import_path",
941 id: "#main/input_double_array",
948 input_double_array: [
953 $import: "import_path",
960 id: "#main/input_string_array",
967 input_string_array: [
972 $import: "import_path",
979 id: "#main/input_bool_include",
983 input_bool_include: {
984 $include: "include_path",
990 id: "#main/input_int_include",
995 $include: "include_path",
1001 id: "#main/input_float_include",
1005 input_float_include: {
1006 $include: "include_path",
1012 id: "#main/input_string_include",
1016 input_string_include: {
1017 $include: "include_path",
1023 id: "#main/input_file_include",
1027 input_file_include: {
1028 $include: "include_path",
1034 id: "#main/input_directory_include",
1038 input_directory_include: {
1039 $include: "include_path",
1045 id: "#main/input_file_url",
1050 basename: "index.html",
1052 location: "http://example.com/index.html",
1058 const testOutputs = [
1061 id: "#main/output_file",
1062 label: "Label Description",
1067 basename: "cat.png",
1069 location: "cat.png",
1075 id: "#main/output_file_with_secondary",
1076 doc: "Doc Description",
1080 output_file_with_secondary: {
1081 basename: "main.dat",
1083 location: "main.dat",
1086 basename: "secondary.dat",
1088 location: "secondary.dat",
1091 basename: "secondary2.dat",
1093 location: "secondary2.dat",
1101 id: "#main/output_dir",
1102 doc: ["Doc desc 1", "Doc desc 2"],
1107 basename: "outdir1",
1109 location: "outdir1",
1115 id: "#main/output_bool",
1124 id: "#main/output_int",
1133 id: "#main/output_long",
1142 id: "#main/output_float",
1146 output_float: 100.5,
1151 id: "#main/output_double",
1155 output_double: 100.3,
1160 id: "#main/output_string",
1164 output_string: "Hello output",
1169 id: "#main/output_file_array",
1176 output_file_array: [
1178 basename: "output2.tar",
1180 location: "output2.tar",
1183 basename: "output3.tar",
1185 location: "output3.tar",
1192 id: "#main/output_dir_array",
1201 basename: "outdir2",
1203 location: "outdir2",
1206 basename: "outdir3",
1208 location: "outdir3",
1215 id: "#main/output_int_array",
1222 output_int_array: [10, 11, 12],
1227 id: "#main/output_long_array",
1234 output_long_array: [51, 52],
1239 id: "#main/output_float_array",
1246 output_float_array: [100.2, 100.4, 100.6],
1251 id: "#main/output_double_array",
1258 output_double_array: [100.1, 100.2, 100.3],
1263 id: "#main/output_string_array",
1270 output_string_array: ["Hello", "Output", "!"],
1275 const verifyIOParameter = (name, label, doc, val, collection, multipleRows) => {
1279 .within($mainRow => {
1280 cy.get($mainRow).scrollIntoView();
1281 label && cy.contains(label);
1284 cy.get($mainRow).nextUntil('[data-cy="process-io-param"]').as("secondaryRows");
1286 if (Array.isArray(val)) {
1287 val.forEach(v => cy.get("@secondaryRows").contains(v));
1289 cy.get("@secondaryRows").contains(val);
1293 cy.get("@secondaryRows").contains(collection);
1297 if (Array.isArray(val)) {
1298 val.forEach(v => cy.contains(v));
1304 cy.contains(collection);
1310 const verifyIOParameterImage = (name, url) => {
1315 cy.get('[alt="Inline Preview"]')
1316 .should("be.visible")
1318 expect($img[0].naturalWidth).to.be.greaterThan(0);
1319 expect($img[0].src).contains(url);
1324 it("displays IO parameters with keep links and previews", function () {
1325 // Create output collection for real files
1326 cy.createCollection(adminUser.token, {
1327 name: `Test collection ${Math.floor(Math.random() * 999999)}`,
1328 owner_uuid: activeUser.user.uuid,
1329 }).then(testOutputCollection => {
1330 cy.loginAs(activeUser);
1332 cy.goToPath(`/collections/${testOutputCollection.uuid}`);
1334 cy.get("[data-cy=upload-button]").click();
1336 cy.fixture("files/cat.png", "base64").then(content => {
1337 cy.get("[data-cy=drag-and-drop]").upload(content, "cat.png");
1338 cy.get("[data-cy=form-submit-btn]").click();
1339 cy.waitForDom().get("[data-cy=form-submit-btn]").should("not.exist");
1340 // Confirm final collection state.
1341 cy.get("[data-cy=collection-files-panel]").contains("cat.png").should("exist");
1344 cy.getCollection(activeUser.token, testOutputCollection.uuid).as("testOutputCollection");
1347 // Get updated collection pdh
1348 cy.getAll("@testOutputCollection").then(([testOutputCollection]) => {
1349 // Add output uuid and inputs to container request
1350 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
1351 req.on('response', res => {
1352 res.body.output_uuid = testOutputCollection.uuid;
1353 res.body.mounts["/var/lib/cwl/cwl.input.json"] = {
1354 content: testInputs.map(param => param.input).reduce((acc, val) => Object.assign(acc, val), {}),
1356 res.body.mounts["/var/lib/cwl/workflow.json"] = {
1361 inputs: testInputs.map(input => input.definition),
1362 outputs: testOutputs.map(output => output.definition),
1370 // Stub fake output collection
1372 { method: "GET", url: `**/arvados/v1/collections/${testOutputCollection.uuid}*` },
1376 uuid: testOutputCollection.uuid,
1377 portable_data_hash: testOutputCollection.portable_data_hash,
1382 // Stub fake output json
1384 { method: "GET", url: "**/c%3Dzzzzz-4zz18-zzzzzzzzzzzzzzz/cwl.output.json" },
1387 body: testOutputs.map(param => param.output).reduce((acc, val) => Object.assign(acc, val), {}),
1391 // Stub webdav response, points to output json
1393 { method: "PROPFIND", url: "*" },
1395 fixture: "webdav-propfind-outputs.xml",
1400 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").as(
1404 cy.getAll("@containerRequest", "@testOutputCollection").then(function ([containerRequest, testOutputCollection]) {
1405 cy.goToPath(`/processes/${containerRequest.uuid}`);
1406 cy.get("[data-cy=process-io-card] h6")
1407 .contains("Input Parameters")
1408 .parents("[data-cy=process-io-card]")
1410 cy.get(ctx).scrollIntoView();
1411 verifyIOParameter("input_file", null, "Label Description", "input1.tar", "00000000000000000000000000000000+01");
1412 verifyIOParameter("input_file", null, "Label Description", "input1-2.txt", undefined, true);
1413 verifyIOParameter("input_file", null, "Label Description", "input1-3.txt", undefined, true);
1414 verifyIOParameter("input_file", null, "Label Description", "input1-4.txt", undefined, true);
1415 verifyIOParameter("input_dir", null, "Doc Description", "/", "11111111111111111111111111111111+01");
1416 verifyIOParameter("input_bool", null, "Doc desc 1, Doc desc 2", "true");
1417 verifyIOParameter("input_int", null, null, "1");
1418 verifyIOParameter("input_long", null, null, "1");
1419 verifyIOParameter("input_float", null, null, "1.5");
1420 verifyIOParameter("input_double", null, null, "1.3");
1421 verifyIOParameter("input_string", null, null, "Hello World");
1422 verifyIOParameter("input_file_array", null, null, "input2.tar", "00000000000000000000000000000000+02");
1423 verifyIOParameter("input_file_array", null, null, "input3.tar", undefined, true);
1424 verifyIOParameter("input_file_array", null, null, "input3-2.txt", undefined, true);
1425 verifyIOParameter("input_file_array", null, null, "Cannot display value", undefined, true);
1426 verifyIOParameter("input_dir_array", null, null, "/", "11111111111111111111111111111111+02");
1427 verifyIOParameter("input_dir_array", null, null, "/", "11111111111111111111111111111111+03", true);
1428 verifyIOParameter("input_dir_array", null, null, "Cannot display value", undefined, true);
1429 verifyIOParameter("input_int_array", null, null, ["1", "3", "5", "Cannot display value"]);
1430 verifyIOParameter("input_long_array", null, null, ["10", "20", "Cannot display value"]);
1431 verifyIOParameter("input_float_array", null, null, ["10.2", "10.4", "10.6", "Cannot display value"]);
1432 verifyIOParameter("input_double_array", null, null, ["20.1", "20.2", "20.3", "Cannot display value"]);
1433 verifyIOParameter("input_string_array", null, null, ["Hello", "World", "!", "Cannot display value"]);
1434 verifyIOParameter("input_bool_include", null, null, "Cannot display value");
1435 verifyIOParameter("input_int_include", null, null, "Cannot display value");
1436 verifyIOParameter("input_float_include", null, null, "Cannot display value");
1437 verifyIOParameter("input_string_include", null, null, "Cannot display value");
1438 verifyIOParameter("input_file_include", null, null, "Cannot display value");
1439 verifyIOParameter("input_directory_include", null, null, "Cannot display value");
1440 verifyIOParameter("input_file_url", null, null, "http://example.com/index.html");
1442 cy.get("[data-cy=process-io-card] h6")
1443 .contains("Output Parameters")
1444 .parents("[data-cy=process-io-card]")
1446 cy.get(ctx).scrollIntoView();
1447 const outPdh = testOutputCollection.portable_data_hash;
1449 verifyIOParameter("output_file", null, "Label Description", "cat.png", `${outPdh}`);
1450 // Disabled until image preview returns
1451 // verifyIOParameterImage("output_file", `/c=${outPdh}/cat.png`);
1452 verifyIOParameter("output_file_with_secondary", null, "Doc Description", "main.dat", `${outPdh}`);
1453 verifyIOParameter("output_file_with_secondary", null, "Doc Description", "secondary.dat", undefined, true);
1454 verifyIOParameter("output_file_with_secondary", null, "Doc Description", "secondary2.dat", undefined, true);
1455 verifyIOParameter("output_dir", null, "Doc desc 1, Doc desc 2", "outdir1", `${outPdh}`);
1456 verifyIOParameter("output_bool", null, null, "true");
1457 verifyIOParameter("output_int", null, null, "1");
1458 verifyIOParameter("output_long", null, null, "1");
1459 verifyIOParameter("output_float", null, null, "100.5");
1460 verifyIOParameter("output_double", null, null, "100.3");
1461 verifyIOParameter("output_string", null, null, "Hello output");
1462 verifyIOParameter("output_file_array", null, null, "output2.tar", `${outPdh}`);
1463 verifyIOParameter("output_file_array", null, null, "output3.tar", undefined, true);
1464 verifyIOParameter("output_dir_array", null, null, "outdir2", `${outPdh}`);
1465 verifyIOParameter("output_dir_array", null, null, "outdir3", undefined, true);
1466 verifyIOParameter("output_int_array", null, null, ["10", "11", "12"]);
1467 verifyIOParameter("output_long_array", null, null, ["51", "52"]);
1468 verifyIOParameter("output_float_array", null, null, ["100.2", "100.4", "100.6"]);
1469 verifyIOParameter("output_double_array", null, null, ["100.1", "100.2", "100.3"]);
1470 verifyIOParameter("output_string_array", null, null, ["Hello", "Output", "!"]);
1475 it("displays IO parameters with no value", function () {
1476 const fakeOutputUUID = "zzzzz-4zz18-abcdefghijklmno";
1477 const fakeOutputPDH = "11111111111111111111111111111111+99/";
1479 cy.loginAs(activeUser);
1481 // Add output uuid and inputs to container request
1482 cy.intercept({ method: "GET", url: "**/arvados/v1/container_requests/*" }, req => {
1483 req.on('response', res => {
1484 res.body.output_uuid = fakeOutputUUID;
1485 res.body.mounts["/var/lib/cwl/cwl.input.json"] = {
1488 res.body.mounts["/var/lib/cwl/workflow.json"] = {
1493 inputs: testInputs.map(input => input.definition),
1494 outputs: testOutputs.map(output => output.definition),
1502 // Stub fake output collection
1504 { method: "GET", url: `**/arvados/v1/collections/${fakeOutputUUID}*` },
1508 uuid: fakeOutputUUID,
1509 portable_data_hash: fakeOutputPDH,
1514 // Stub fake output json
1516 { method: "GET", url: `**/c%3D${fakeOutputUUID}/cwl.output.json` },
1523 cy.readFile("cypress/fixtures/webdav-propfind-outputs.xml").then(data => {
1524 // Stub webdav response, points to output json
1526 { method: "PROPFIND", url: "*" },
1529 body: data.replace(/zzzzz-4zz18-zzzzzzzzzzzzzzz/g, fakeOutputUUID),
1534 createContainerRequest(activeUser, "test_container_request", "arvados/jobs", ["echo", "hello world"], false, "Committed").as(
1538 cy.getAll("@containerRequest").then(function ([containerRequest]) {
1539 cy.goToPath(`/processes/${containerRequest.uuid}`);
1542 cy.get("[data-cy=process-io-card] h6")
1543 .contains("Input Parameters")
1544 .parents("[data-cy=process-io-card]")
1546 cy.get(ctx).scrollIntoView();
1550 testInputs.map((input) => {
1551 verifyIOParameter(input.definition.id.split('/').slice(-1)[0], null, null, "No value");
1554 cy.get("[data-cy=process-io-card] h6")
1555 .contains("Output Parameters")
1556 .parents("[data-cy=process-io-card]")
1558 cy.get(ctx).scrollIntoView();
1560 testOutputs.map((output) => {
1561 verifyIOParameter(output.definition.id.split('/').slice(-1)[0], null, null, "No value");