// SPDX-License-Identifier: AGPL-3.0
import { unionize, ofType, UnionOf } from "common/unionize";
-import { loadProcess } from 'store/processes/processes-actions';
-import { Dispatch } from 'redux';
-import { ProcessStatus } from 'store/processes/process';
-import { RootState } from 'store/store';
+import { getInputs, getOutputParameters, getRawInputs, getRawOutputs, loadProcess } from "store/processes/processes-actions";
+import { Dispatch } from "redux";
+import { ProcessStatus } from "store/processes/process";
+import { RootState } from "store/store";
import { ServiceRepository } from "services/services";
-import { navigateTo, navigateToWorkflows } from 'store/navigation/navigation-action';
-import { snackbarActions } from 'store/snackbar/snackbar-actions';
-import { SnackbarKind } from '../snackbar/snackbar-actions';
-import { showWorkflowDetails } from 'store/workflow-panel/workflow-panel-actions';
-import { loadSubprocessPanel } from "../subprocess-panel/subprocess-panel-actions";
+import { navigateTo } from "store/navigation/navigation-action";
+import { snackbarActions } from "store/snackbar/snackbar-actions";
+import { SnackbarKind } from "../snackbar/snackbar-actions";
+import { loadSubprocessPanel, subprocessPanelActions } from "../subprocess-panel/subprocess-panel-actions";
+import { initProcessLogsPanel, processLogsPanelActions } from "store/process-logs-panel/process-logs-panel-actions";
+import { CollectionFile } from "models/collection-file";
+import { ContainerRequestResource } from "models/container-request";
+import { CommandOutputParameter } from "cwlts/mappings/v1.0/CommandOutputParameter";
+import { CommandInputParameter, getIOParamId, WorkflowInputsData } from "models/workflow";
+import { getIOParamDisplayValue, ProcessIOParameter } from "views/process-panel/process-io-card";
+import { OutputDetails, NodeInstanceType, NodeInfo } from "./process-panel";
+import { AuthState } from "store/auth/auth-reducer";
+import { ContextMenuResource } from "store/context-menu/context-menu-actions";
export const processPanelActions = unionize({
+ RESET_PROCESS_PANEL: ofType<{}>(),
SET_PROCESS_PANEL_CONTAINER_REQUEST_UUID: ofType<string>(),
SET_PROCESS_PANEL_FILTERS: ofType<string[]>(),
TOGGLE_PROCESS_PANEL_FILTER: ofType<string>(),
+ SET_INPUT_RAW: ofType<WorkflowInputsData | null>(),
+ SET_INPUT_PARAMS: ofType<ProcessIOParameter[] | null>(),
+ SET_OUTPUT_RAW: ofType<OutputDetails | null>(),
+ SET_OUTPUT_DEFINITIONS: ofType<CommandOutputParameter[]>(),
+ SET_OUTPUT_PARAMS: ofType<ProcessIOParameter[] | null>(),
+ SET_NODE_INFO: ofType<NodeInfo>(),
});
export type ProcessPanelAction = UnionOf<typeof processPanelActions>;
export const toggleProcessPanelFilter = processPanelActions.TOGGLE_PROCESS_PANEL_FILTER;
-export const loadProcessPanel = (uuid: string) =>
- (dispatch: Dispatch) => {
- dispatch<ProcessPanelAction>(processPanelActions.SET_PROCESS_PANEL_CONTAINER_REQUEST_UUID(uuid));
- dispatch<any>(loadProcess(uuid));
- dispatch(initProcessPanelFilters);
- dispatch<any>(loadSubprocessPanel());
+export const loadProcessPanel = (uuid: string) => async (dispatch: Dispatch, getState: () => RootState) => {
+ // Reset subprocess data explorer if navigating to new process
+ // Avoids resetting pagination when refreshing same process
+ if (getState().processPanel.containerRequestUuid !== uuid) {
+ dispatch(subprocessPanelActions.CLEAR());
+ }
+ dispatch(processPanelActions.RESET_PROCESS_PANEL());
+ dispatch(processLogsPanelActions.RESET_PROCESS_LOGS_PANEL());
+ dispatch<ProcessPanelAction>(processPanelActions.SET_PROCESS_PANEL_CONTAINER_REQUEST_UUID(uuid));
+ await dispatch<any>(loadProcess(uuid));
+ dispatch(initProcessPanelFilters);
+ dispatch<any>(initProcessLogsPanel(uuid));
+ dispatch<any>(loadSubprocessPanel());
+};
+
+export const navigateToOutput = (resource: ContextMenuResource | ContainerRequestResource) => async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+ try {
+ await services.collectionService.get(resource.outputUuid || '');
+ dispatch<any>(navigateTo(resource.outputUuid || ''));
+ } catch {
+ dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Output collection was trashed or deleted.", hideDuration: 4000, kind: SnackbarKind.WARNING }));
+ }
+};
+
+export const loadInputs =
+ (containerRequest: ContainerRequestResource) => async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_INPUT_RAW(getRawInputs(containerRequest)));
+ dispatch<ProcessPanelAction>(processPanelActions.SET_INPUT_PARAMS(formatInputData(getInputs(containerRequest), getState().auth)));
+ };
+
+export const loadOutputs =
+ (containerRequest: ContainerRequestResource) => async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+ const noOutputs = { rawOutputs: {} };
+
+ if (!containerRequest.outputUuid) {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_OUTPUT_RAW({ uuid: containerRequest.uuid, outputRaw: noOutputs }));
+ return;
+ }
+ try {
+ const propsOutputs = getRawOutputs(containerRequest);
+ const filesPromise = services.collectionService.files(containerRequest.outputUuid);
+ const collectionPromise = services.collectionService.get(containerRequest.outputUuid);
+ const [files, collection] = await Promise.all([filesPromise, collectionPromise]);
+
+ // If has propsOutput, skip fetching cwl.output.json
+ if (propsOutputs !== undefined) {
+ dispatch<ProcessPanelAction>(
+ processPanelActions.SET_OUTPUT_RAW({
+ rawOutputs: propsOutputs,
+ pdh: collection.portableDataHash,
+ })
+ );
+ } else {
+ // Fetch outputs from keep
+ const outputFile = files.find(file => file.name === "cwl.output.json") as CollectionFile | undefined;
+ let outputData = outputFile ? await services.collectionService.getFileContents(outputFile) : undefined;
+ if (outputData && (outputData = JSON.parse(outputData)) && collection.portableDataHash) {
+ dispatch<ProcessPanelAction>(
+ processPanelActions.SET_OUTPUT_RAW({
+ uuid: containerRequest.uuid,
+ outputRaw: { rawOutputs: outputData, pdh: collection.portableDataHash },
+ })
+ );
+ } else {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_OUTPUT_RAW({ uuid: containerRequest.uuid, outputRaw: noOutputs }));
+ }
+ }
+ } catch {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_OUTPUT_RAW({ uuid: containerRequest.uuid, outputRaw: noOutputs }));
+ }
};
-export const navigateToOutput = (uuid: string) =>
- async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+export const loadNodeJson =
+ (containerRequest: ContainerRequestResource) => async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+ const noLog = { nodeInfo: null };
+ if (!containerRequest.logUuid) {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_NODE_INFO(noLog));
+ return;
+ }
try {
- await services.collectionService.get(uuid);
- dispatch<any>(navigateTo(uuid));
+ const filesPromise = services.collectionService.files(containerRequest.logUuid);
+ const collectionPromise = services.collectionService.get(containerRequest.logUuid);
+ const [files] = await Promise.all([filesPromise, collectionPromise]);
+
+ // Fetch node.json from keep
+ const nodeFile = files.find(file => file.name === "node.json") as CollectionFile | undefined;
+ let nodeData = nodeFile ? await services.collectionService.getFileContents(nodeFile) : undefined;
+ if (nodeData && (nodeData = JSON.parse(nodeData))) {
+ dispatch<ProcessPanelAction>(
+ processPanelActions.SET_NODE_INFO({
+ nodeInfo: nodeData as NodeInstanceType,
+ })
+ );
+ } else {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_NODE_INFO(noLog));
+ }
} catch {
- dispatch(snackbarActions.OPEN_SNACKBAR({ message: 'This collection does not exists!', hideDuration: 2000, kind: SnackbarKind.ERROR }));
+ dispatch<ProcessPanelAction>(processPanelActions.SET_NODE_INFO(noLog));
}
};
-export const openWorkflow = (uuid: string) =>
- (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
- dispatch<any>(navigateToWorkflows);
- dispatch<any>(showWorkflowDetails(uuid));
+export const loadOutputDefinitions =
+ (containerRequest: ContainerRequestResource) => async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+ if (containerRequest && containerRequest.mounts) {
+ dispatch<ProcessPanelAction>(processPanelActions.SET_OUTPUT_DEFINITIONS(getOutputParameters(containerRequest)));
+ }
};
+export const updateOutputParams = () => async (dispatch: Dispatch<any>, getState: () => RootState, services: ServiceRepository) => {
+ const outputDefinitions = getState().processPanel.outputDefinitions;
+ const outputRaw = getState().processPanel.outputRaw;
+
+ if (outputRaw && outputRaw.rawOutputs) {
+ dispatch<ProcessPanelAction>(
+ processPanelActions.SET_OUTPUT_PARAMS(formatOutputData(outputDefinitions, outputRaw.rawOutputs, outputRaw.pdh, getState().auth))
+ );
+ }
+};
+
+export const openWorkflow = (uuid: string) => (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
+ dispatch<any>(navigateTo(uuid));
+};
+
export const initProcessPanelFilters = processPanelActions.SET_PROCESS_PANEL_FILTERS([
ProcessStatus.QUEUED,
ProcessStatus.COMPLETED,
ProcessStatus.FAILED,
ProcessStatus.RUNNING,
- ProcessStatus.LOCKED,
- ProcessStatus.CANCELLED
+ ProcessStatus.ONHOLD,
+ ProcessStatus.FAILING,
+ ProcessStatus.WARNING,
+ ProcessStatus.CANCELLED,
]);
+
+export const formatInputData = (inputs: CommandInputParameter[], auth: AuthState): ProcessIOParameter[] => {
+ return inputs.map(input => {
+ return {
+ id: getIOParamId(input),
+ label: input.label || "",
+ value: getIOParamDisplayValue(auth, input),
+ };
+ });
+};
+
+export const formatOutputData = (
+ definitions: CommandOutputParameter[],
+ values: any,
+ pdh: string | undefined,
+ auth: AuthState
+): ProcessIOParameter[] => {
+ return definitions.map(output => {
+ return {
+ id: getIOParamId(output),
+ label: output.label || "",
+ value: getIOParamDisplayValue(auth, Object.assign(output, { value: values[getIOParamId(output)] || [] }), pdh),
+ };
+ });
+};
projects / arvados-workbench2.git / blobdiff