navigateTo: (link: any) => link,
}));
-jest.mock("~/models/process", () => ({
+jest.mock("models/process", () => ({
createWorkflowMounts: jest.fn(),
}));
email: "test@gmail.com",
firstName: "TestFirstName",
lastName: "TestLastName",
- uuid: "ce8i5-tpzed-yid70bw31f51234",
- ownerUuid: "ce8i5-tpzed-000000000000000",
+ uuid: "zzzzz-tpzed-yid70bw31f51234",
+ ownerUuid: "zzzzz-tpzed-000000000000000",
isAdmin: false,
isActive: true,
username: "testfirstname",
},
},
runProcessPanel: {
- processPathname: "/projects/ce8i5-tpzed-yid70bw31f51234",
- processOwnerUuid: "ce8i5-tpzed-yid70bw31f51234",
+ processPathname: "/projects/zzzzz-tpzed-yid70bw31f51234",
+ processOwnerUuid: "zzzzz-tpzed-yid70bw31f51234",
selectedWorkflow: {
- href: "/workflows/ce8i5-7fd4e-2tlnerdkxnl4fjt",
+ href: "/workflows/zzzzz-7fd4e-2tlnerdkxnl4fjt",
kind: "arvados#workflow",
etag: "8gh5xlhlgo61yqscyl1spw8tc",
- uuid: "ce8i5-7fd4e-2tlnerdkxnl4fjt",
- ownerUuid: "ce8i5-tpzed-o4njwilpp4ov321",
+ uuid: "zzzzz-7fd4e-2tlnerdkxnl4fjt",
+ ownerUuid: "zzzzz-tpzed-o4njwilpp4ov321",
createdAt: "2020-07-15T19:40:50.296041000Z",
- modifiedByClientUuid: "ce8i5-ozdt8-libnr89sc5nq111",
- modifiedByUserUuid: "ce8i5-tpzed-o4njwilpp4ov321",
+ modifiedByClientUuid: "zzzzz-ozdt8-libnr89sc5nq111",
+ modifiedByUserUuid: "zzzzz-tpzed-o4njwilpp4ov321",
modifiedAt: "2020-07-15T19:40:50.296376000Z",
name: "revsort.cwl",
description:
"Reverse the lines in a document, then sort those lines.",
definition:
- '{\n "$graph": [\n {\n "class": "Workflow",\n "doc": "Reverse the lines in a document, then sort those lines.",\n "id": "#main",\n "hints":[{"class":"http://arvados.org/cwl#WorkflowRunnerResources","acrContainerImage":"arvados/jobs:2.0.4"}], "inputs": [\n {\n "default": null,\n "doc": "The input file to be processed.",\n "id": "#main/input",\n "type": "File"\n },\n {\n "default": true,\n "doc": "If true, reverse (decending) sort",\n "id": "#main/reverse_sort",\n "type": "boolean"\n }\n ],\n "outputs": [\n {\n "doc": "The output with the lines reversed and sorted.",\n "id": "#main/output",\n "outputSource": "#main/sorted/output",\n "type": "File"\n }\n ],\n "steps": [\n {\n "id": "#main/rev",\n "in": [\n {\n "id": "#main/rev/input",\n "source": "#main/input"\n }\n ],\n "out": [\n "#main/rev/output"\n ],\n "run": "#revtool.cwl"\n },\n {\n "id": "#main/sorted",\n "in": [\n {\n "id": "#main/sorted/input",\n "source": "#main/rev/output"\n },\n {\n "id": "#main/sorted/reverse",\n "source": "#main/reverse_sort"\n }\n ],\n "out": [\n "#main/sorted/output"\n ],\n "run": "#sorttool.cwl"\n }\n ]\n },\n {\n "baseCommand": "rev",\n "class": "CommandLineTool",\n "doc": "Reverse each line using the `rev` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#revtool.cwl",\n "inputs": [\n {\n "id": "#revtool.cwl/input",\n "inputBinding": {},\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#revtool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n },\n {\n "baseCommand": "sort",\n "class": "CommandLineTool",\n "doc": "Sort lines using the `sort` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#sorttool.cwl",\n "inputs": [\n {\n "id": "#sorttool.cwl/reverse",\n "inputBinding": {\n "position": 1,\n "prefix": "-r"\n },\n "type": "boolean"\n },\n {\n "id": "#sorttool.cwl/input",\n "inputBinding": {\n "position": 2\n },\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#sorttool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n }\n ],\n "cwlVersion": "v1.0"\n}',
+ '{\n "$graph": [\n {\n "class": "Workflow",\n "doc": "Reverse the lines in a document, then sort those lines.",\n "id": "#main",\n "hints":[{"class":"http://arvados.org/cwl#WorkflowRunnerResources","acrContainerImage":"arvados/jobs:2.0.4", "ramMin": 16000}], "inputs": [\n {\n "default": null,\n "doc": "The input file to be processed.",\n "id": "#main/input",\n "type": "File"\n },\n {\n "default": true,\n "doc": "If true, reverse (decending) sort",\n "id": "#main/reverse_sort",\n "type": "boolean"\n }\n ],\n "outputs": [\n {\n "doc": "The output with the lines reversed and sorted.",\n "id": "#main/output",\n "outputSource": "#main/sorted/output",\n "type": "File"\n }\n ],\n "steps": [\n {\n "id": "#main/rev",\n "in": [\n {\n "id": "#main/rev/input",\n "source": "#main/input"\n }\n ],\n "out": [\n "#main/rev/output"\n ],\n "run": "#revtool.cwl"\n },\n {\n "id": "#main/sorted",\n "in": [\n {\n "id": "#main/sorted/input",\n "source": "#main/rev/output"\n },\n {\n "id": "#main/sorted/reverse",\n "source": "#main/reverse_sort"\n }\n ],\n "out": [\n "#main/sorted/output"\n ],\n "run": "#sorttool.cwl"\n }\n ]\n },\n {\n "baseCommand": "rev",\n "class": "CommandLineTool",\n "doc": "Reverse each line using the `rev` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#revtool.cwl",\n "inputs": [\n {\n "id": "#revtool.cwl/input",\n "inputBinding": {},\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#revtool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n },\n {\n "baseCommand": "sort",\n "class": "CommandLineTool",\n "doc": "Sort lines using the `sort` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#sorttool.cwl",\n "inputs": [\n {\n "id": "#sorttool.cwl/reverse",\n "inputBinding": {\n "position": 1,\n "prefix": "-r"\n },\n "type": "boolean"\n },\n {\n "id": "#sorttool.cwl/input",\n "inputBinding": {\n "position": 2\n },\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#sorttool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n }\n ],\n "cwlVersion": "v1.0"\n}',
},
},
});
"arvados-cwl-runner",
"--api=containers",
"--local",
- "--project-uuid=ce8i5-tpzed-yid70bw31f51234",
+ "--project-uuid=zzzzz-tpzed-yid70bw31f51234",
"/var/lib/cwl/workflow.json#main",
"/var/lib/cwl/cwl.input.json",
],
description: "basicFormTestDescription",
mounts: undefined,
name: "basicFormTestName",
- outputName: undefined,
+ outputName: "Output from basicFormTestName",
outputPath: "/var/spool/cwl",
- ownerUuid: "ce8i5-tpzed-yid70bw31f51234",
+ ownerUuid: "zzzzz-tpzed-yid70bw31f51234",
priority: 1,
properties: {
workflowName: "revsort.cwl",
- workflowUuid: "ce8i5-7fd4e-2tlnerdkxnl4fjt",
+ template_uuid: "zzzzz-7fd4e-2tlnerdkxnl4fjt",
},
runtimeConstraints: {
API: true,
- ram: 1073741824,
+ ram: 16256 * (1024 * 1024),
vcpus: 1,
},
schedulingParameters: { max_run_time: undefined },
state: "Committed",
+ useExisting: false
});
// and