},
event_type: 'stdout'
}).then(function(log) {
- cy.get('[data-cy=process-logs]')
+ cy.get('[data-cy=process-logs]', {timeout: 7000})
.should('not.contain', 'No logs yet')
.and('contain', 'hello world');
})
});
});
+ it('shows process details', function() {
+ createContainerRequest(
+ activeUser,
+ `test_container_request ${Math.floor(Math.random() * 999999)}`,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Committed')
+ .then(function(containerRequest) {
+ cy.loginAs(activeUser);
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.get('[data-cy=process-details]').should('contain', containerRequest.name);
+ cy.get('[data-cy=process-details-attributes-modifiedby-user]').contains(`Active User (${activeUser.user.uuid})`);
+ cy.get('[data-cy=process-details-attributes-runtime-user]').should('not.exist');
+ });
+
+ // Fake submitted by another user
+ cy.intercept({method: 'GET', url: '**/arvados/v1/container_requests/*'}, (req) => {
+ req.reply((res) => {
+ res.body.modified_by_user_uuid = 'zzzzz-tpzed-000000000000000';
+ });
+ });
+
+ createContainerRequest(
+ activeUser,
+ `test_container_request ${Math.floor(Math.random() * 999999)}`,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Committed')
+ .then(function(containerRequest) {
+ cy.loginAs(activeUser);
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.get('[data-cy=process-details]').should('contain', containerRequest.name);
+ cy.get('[data-cy=process-details-attributes-modifiedby-user]').contains(`zzzzz-tpzed-000000000000000`);
+ cy.get('[data-cy=process-details-attributes-runtime-user]').contains(`Active User (${activeUser.user.uuid})`);
+ });
+ });
+
it('filters process logs by event type', function() {
const nodeInfoLogs = [
'Host Information',
cy.loginAs(activeUser);
cy.goToPath(`/processes/${containerRequest.uuid}`);
// Should show main logs by default
- cy.get('[data-cy=process-logs-filter]').should('contain', 'Main logs');
+ cy.get('[data-cy=process-logs-filter]', {timeout: 7000}).should('contain', 'Main logs');
cy.get('[data-cy=process-logs]')
.should('contain', stdoutLogs[Math.floor(Math.random() * stdoutLogs.length)])
.and('not.contain', nodeInfoLogs[Math.floor(Math.random() * nodeInfoLogs.length)])
cy.getAll('@containerRequest').then(function([containerRequest]) {
cy.goToPath(`/processes/${containerRequest.uuid}`);
- cy.get('[data-cy=process-runtime-status-retry-warning]')
+ cy.get('[data-cy=process-runtime-status-retry-warning]', {timeout: 7000})
.should('contain', 'Process retried 1 time');
});
cy.getAll('@containerRequest').then(function([containerRequest]) {
containerCount = 3;
cy.goToPath(`/processes/${containerRequest.uuid}`);
- cy.get('[data-cy=process-runtime-status-retry-warning]')
+ cy.get('[data-cy=process-runtime-status-retry-warning]', {timeout: 7000})
.should('contain', 'Process retried 2 times');
});
});
"location": "keep:00000000000000000000000000000000+03/input3-2.txt"
}
]
+ },
+ {
+ "$import": "import_path"
}
]
}
"basename": "11111111111111111111111111111111+03",
"class": "Directory",
"location": "keep:11111111111111111111111111111111+03"
+ },
+ {
+ "$import": "import_path"
}
]
}
"input_int_array": [
1,
3,
- 5
+ 5,
+ {
+ "$import": "import_path"
+ }
]
}
},
input: {
"input_long_array": [
10,
- 20
+ 20,
+ {
+ "$import": "import_path"
+ }
]
}
},
"input_float_array": [
10.2,
10.4,
- 10.6
+ 10.6,
+ {
+ "$import": "import_path"
+ }
]
}
},
"input_double_array": [
20.1,
20.2,
- 20.3
+ 20.3,
+ {
+ "$import": "import_path"
+ }
]
}
},
"input_string_array": [
"Hello",
"World",
- "!"
+ "!",
+ {
+ "$import": "import_path"
+ }
]
}
+ },
+ {
+ definition: {
+ "id": "#main/input_bool_include",
+ "type": "boolean"
+ },
+ input: {
+ "input_bool_include": {
+ "$include": "include_path"
+ }
+ }
+ },
+ {
+ definition: {
+ "id": "#main/input_int_include",
+ "type": "int"
+ },
+ input: {
+ "input_int_include": {
+ "$include": "include_path"
+ }
+ }
+ },
+ {
+ definition: {
+ "id": "#main/input_float_include",
+ "type": "float"
+ },
+ input: {
+ "input_float_include": {
+ "$include": "include_path"
+ }
+ }
+ },
+ {
+ definition: {
+ "id": "#main/input_string_include",
+ "type": "string"
+ },
+ input: {
+ "input_string_include": {
+ "$include": "include_path"
+ }
+ }
+ },
+ {
+ definition: {
+ "id": "#main/input_file_include",
+ "type": "File"
+ },
+ input: {
+ "input_file_include": {
+ "$include": "include_path"
+ }
+ }
+ },
+ {
+ definition: {
+ "id": "#main/input_directory_include",
+ "type": "Directory"
+ },
+ input: {
+ "input_directory_include": {
+ "$include": "include_path"
+ }
+ }
+ },
+ {
+ definition: {
+ "id": "#main/input_file_url",
+ "type": "File"
+ },
+ input: {
+ "input_file_url": {
+ "basename": "index.html",
+ "class": "File",
+ "location": "http://example.com/index.html"
+ }
+ }
}
];
cy.goToPath(`/processes/${containerRequest.uuid}`);
cy.get('[data-cy=process-io-card] h6').contains('Inputs')
.parents('[data-cy=process-io-card]').within(() => {
- cy.wait(2000);
- cy.waitForDom();
verifyIOParameter('input_file', null, "Label Description", 'input1.tar', '00000000000000000000000000000000+01');
verifyIOParameter('input_file', null, "Label Description", 'input1-2.txt', undefined, true);
verifyIOParameter('input_file', null, "Label Description", 'input1-3.txt', undefined, true);
verifyIOParameter('input_file', null, "Label Description", 'input1-4.txt', undefined, true);
- verifyIOParameter('input_dir', null, "Doc Description", 'No value', '11111111111111111111111111111111+01');
+ verifyIOParameter('input_dir', null, "Doc Description", '/', '11111111111111111111111111111111+01');
verifyIOParameter('input_bool', null, "Doc desc 1, Doc desc 2", 'true');
verifyIOParameter('input_int', null, null, '1');
verifyIOParameter('input_long', null, null, '1');
verifyIOParameter('input_file_array', null, null, 'input2.tar', '00000000000000000000000000000000+02');
verifyIOParameter('input_file_array', null, null, 'input3.tar', undefined, true);
verifyIOParameter('input_file_array', null, null, 'input3-2.txt', undefined, true);
- verifyIOParameter('input_dir_array', null, null, 'No value', '11111111111111111111111111111111+02');
- verifyIOParameter('input_dir_array', null, null, 'No value', '11111111111111111111111111111111+03', true);
- verifyIOParameter('input_int_array', null, null, ["1", "3", "5"]);
- verifyIOParameter('input_long_array', null, null, ["10", "20"]);
- verifyIOParameter('input_float_array', null, null, ["10.2", "10.4", "10.6"]);
- verifyIOParameter('input_double_array', null, null, ["20.1", "20.2", "20.3"]);
- verifyIOParameter('input_string_array', null, null, ["Hello", "World", "!"]);
+ verifyIOParameter('input_file_array', null, null, 'Cannot display value', undefined, true);
+ verifyIOParameter('input_dir_array', null, null, '/', '11111111111111111111111111111111+02');
+ verifyIOParameter('input_dir_array', null, null, '/', '11111111111111111111111111111111+03', true);
+ verifyIOParameter('input_dir_array', null, null, 'Cannot display value', undefined, true);
+ verifyIOParameter('input_int_array', null, null, ["1", "3", "5", "Cannot display value"]);
+ verifyIOParameter('input_long_array', null, null, ["10", "20", "Cannot display value"]);
+ verifyIOParameter('input_float_array', null, null, ["10.2", "10.4", "10.6", "Cannot display value"]);
+ verifyIOParameter('input_double_array', null, null, ["20.1", "20.2", "20.3", "Cannot display value"]);
+ verifyIOParameter('input_string_array', null, null, ["Hello", "World", "!", "Cannot display value"]);
+ verifyIOParameter('input_bool_include', null, null, "Cannot display value");
+ verifyIOParameter('input_int_include', null, null, "Cannot display value");
+ verifyIOParameter('input_float_include', null, null, "Cannot display value");
+ verifyIOParameter('input_string_include', null, null, "Cannot display value");
+ verifyIOParameter('input_file_include', null, null, "Cannot display value");
+ verifyIOParameter('input_directory_include', null, null, "Cannot display value");
+ verifyIOParameter('input_file_url', null, null, "http://example.com/index.html");
});
cy.get('[data-cy=process-io-card] h6').contains('Outputs')
.parents('[data-cy=process-io-card]').within((ctx) => {
cy.get(ctx).scrollIntoView();
- cy.waitForDom().get('[data-cy="io-preview-image-toggle"]').click();
+ cy.get('[data-cy="io-preview-image-toggle"]').click({waitForAnimations: false});
const outPdh = testOutputCollection.portable_data_hash;
verifyIOParameter('output_file', null, "Label Description", 'cat.png', `${outPdh}`);
});
});
+
+ it('allows copying processes', function() {
+ const crName = 'first_container_request';
+ const copiedCrName = 'copied_container_request';
+ createContainerRequest(
+ activeUser,
+ crName,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Committed')
+ .then(function(containerRequest) {
+ cy.loginAs(activeUser);
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.get('[data-cy=process-details]').should('contain', crName);
+
+ cy.get('[data-cy=process-details]').find('button[title="More options"]').click();
+ cy.get('ul[data-cy=context-menu]').contains("Copy and re-run process").click();
+ });
+
+ cy.get('[data-cy=form-dialog]').within(() => {
+ cy.get('input[name=name]').clear().type(copiedCrName);
+ cy.get('[data-cy=projects-tree-home-tree-picker]').click();
+ cy.get('[data-cy=form-submit-btn]').click();
+ });
+
+ cy.get('[data-cy=process-details]').should('contain', copiedCrName);
+ cy.get('[data-cy=process-details]').find('button').contains('Run');
+ });
+
+ const getFakeContainer = (fakeContainerUuid) => ({
+ href: `/containers/${fakeContainerUuid}`,
+ kind: "arvados#container",
+ etag: "ecfosljpnxfari9a8m7e4yv06",
+ uuid: fakeContainerUuid,
+ owner_uuid: "zzzzz-tpzed-000000000000000",
+ created_at: "2023-02-13T15:55:47.308915000Z",
+ modified_by_client_uuid: "zzzzz-ozdt8-q6dzdi1lcc03155",
+ modified_by_user_uuid: "zzzzz-tpzed-000000000000000",
+ modified_at: "2023-02-15T19:12:45.987086000Z",
+ command: [
+ "arvados-cwl-runner",
+ "--api=containers",
+ "--local",
+ "--project-uuid=zzzzz-j7d0g-yr18k784zplfeza",
+ "/var/lib/cwl/workflow.json#main",
+ "/var/lib/cwl/cwl.input.json",
+ ],
+ container_image: "4ad7d11381df349e464694762db14e04+303",
+ cwd: "/var/spool/cwl",
+ environment: {},
+ exit_code: null,
+ finished_at: null,
+ locked_by_uuid: null,
+ log: null,
+ output: null,
+ output_path: "/var/spool/cwl",
+ progress: null,
+ runtime_constraints: {
+ API: true,
+ cuda: {
+ device_count: 0,
+ driver_version: "",
+ hardware_capability: "",
+ },
+ keep_cache_disk: 2147483648,
+ keep_cache_ram: 0,
+ ram: 1342177280,
+ vcpus: 1,
+ },
+ runtime_status: {},
+ started_at: null,
+ auth_uuid: null,
+ scheduling_parameters: {
+ max_run_time: 0,
+ partitions: [],
+ preemptible: false,
+ },
+ runtime_user_uuid: "zzzzz-tpzed-vllbpebicy84rd5",
+ runtime_auth_scopes: ["all"],
+ lock_count: 2,
+ gateway_address: null,
+ interactive_session_started: false,
+ output_storage_classes: ["default"],
+ output_properties: {},
+ cost: 0.0,
+ subrequests_cost: 0.0,
+ });
+
+ it('shows cancel button when appropriate', function() {
+ // Ignore collection requests
+ cy.intercept({method: 'GET', url: `**/arvados/v1/collections/*`}, {
+ statusCode: 200,
+ body: {}
+ });
+
+ // Uncommitted container
+ const crUncommitted = `Test process ${Math.floor(Math.random() * 999999)}`;
+ createContainerRequest(
+ activeUser,
+ crUncommitted,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Uncommitted')
+ .then(function(containerRequest) {
+ // Navigate to process and verify run / cancel button
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.waitForDom();
+ cy.get('[data-cy=process-details]').should('contain', crUncommitted);
+ cy.get('[data-cy=process-run-button]').should('exist');
+ cy.get('[data-cy=process-cancel-button]').should('not.exist');
+ });
+
+ // Queued container
+ const crQueued = `Test process ${Math.floor(Math.random() * 999999)}`;
+ const fakeCrUuid = 'zzzzz-dz642-000000000000001';
+ createContainerRequest(
+ activeUser,
+ crQueued,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Committed')
+ .then(function(containerRequest) {
+ // Fake container uuid
+ cy.intercept({method: 'GET', url: `**/arvados/v1/container_requests/${containerRequest.uuid}`}, (req) => {
+ req.reply((res) => {
+ res.body.output_uuid = fakeCrUuid;
+ res.body.priority = 500;
+ res.body.state = "Committed";
+ });
+ });
+
+ // Fake container
+ const container = getFakeContainer(fakeCrUuid);
+ cy.intercept({method: 'GET', url: `**/arvados/v1/container/${fakeCrUuid}`}, {
+ statusCode: 200,
+ body: {...container, state: "Queued", priority: 500}
+ });
+
+ // Navigate to process and verify cancel button
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.waitForDom();
+ cy.get('[data-cy=process-details]').should('contain', crQueued);
+ cy.get('[data-cy=process-cancel-button]').contains('Cancel');
+ });
+
+ // Locked container
+ const crLocked = `Test process ${Math.floor(Math.random() * 999999)}`;
+ const fakeCrLockedUuid = 'zzzzz-dz642-000000000000002';
+ createContainerRequest(
+ activeUser,
+ crLocked,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Committed')
+ .then(function(containerRequest) {
+ // Fake container uuid
+ cy.intercept({method: 'GET', url: `**/arvados/v1/container_requests/${containerRequest.uuid}`}, (req) => {
+ req.reply((res) => {
+ res.body.output_uuid = fakeCrLockedUuid;
+ res.body.priority = 500;
+ res.body.state = "Committed";
+ });
+ });
+
+ // Fake container
+ const container = getFakeContainer(fakeCrLockedUuid);
+ cy.intercept({method: 'GET', url: `**/arvados/v1/container/${fakeCrLockedUuid}`}, {
+ statusCode: 200,
+ body: {...container, state: "Locked", priority: 500}
+ });
+
+ // Navigate to process and verify cancel button
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.waitForDom();
+ cy.get('[data-cy=process-details]').should('contain', crLocked);
+ cy.get('[data-cy=process-cancel-button]').contains('Cancel');
+ });
+
+ // On Hold container
+ const crOnHold = `Test process ${Math.floor(Math.random() * 999999)}`;
+ const fakeCrOnHoldUuid = 'zzzzz-dz642-000000000000003';
+ createContainerRequest(
+ activeUser,
+ crOnHold,
+ 'arvados/jobs',
+ ['echo', 'hello world'],
+ false, 'Committed')
+ .then(function(containerRequest) {
+ // Fake container uuid
+ cy.intercept({method: 'GET', url: `**/arvados/v1/container_requests/${containerRequest.uuid}`}, (req) => {
+ req.reply((res) => {
+ res.body.output_uuid = fakeCrOnHoldUuid;
+ res.body.priority = 0;
+ res.body.state = "Committed";
+ });
+ });
+
+ // Fake container
+ const container = getFakeContainer(fakeCrOnHoldUuid);
+ cy.intercept({method: 'GET', url: `**/arvados/v1/container/${fakeCrOnHoldUuid}`}, {
+ statusCode: 200,
+ body: {...container, state: "Queued", priority: 0}
+ });
+
+ // Navigate to process and verify cancel button
+ cy.goToPath(`/processes/${containerRequest.uuid}`);
+ cy.waitForDom();
+ cy.get('[data-cy=process-details]').should('contain', crOnHold);
+ cy.get('[data-cy=process-run-button]').should('exist');
+ cy.get('[data-cy=process-cancel-button]').should('not.exist');
+ });
+ });
+
});
projects / arvados-workbench2.git / blobdiff