import { RootState } from '~/store/store';
import { ServiceRepository } from '~/services/services';
import { updateResources } from '~/store/resources/resources-actions';
-import { FilterBuilder } from '~/services/api/filter-builder';
-import { ContainerRequestResource } from '~/models/container-request';
import { Process } from './process';
import { dialogActions } from '~/store/dialog/dialog-actions';
import { snackbarActions, SnackbarKind } from '~/store/snackbar/snackbar-actions';
import { navigateToRunProcess } from '~/store/navigation/navigation-action';
import { goToStep, runProcessPanelActions } from '~/store/run-process-panel/run-process-panel-actions';
import { getResource } from '~/store/resources/resources';
-import { getInputValue } from "~/views-components/process-input-dialog/process-input-dialog";
import { initialize } from "redux-form";
import { RUN_PROCESS_BASIC_FORM, RunProcessBasicFormData } from "~/views/run-process-panel/run-process-basic-form";
import { RunProcessAdvancedFormData, RUN_PROCESS_ADVANCED_FORM } from "~/views/run-process-panel/run-process-advanced-form";
+import { MOUNT_PATH_CWL_WORKFLOW, MOUNT_PATH_CWL_INPUT } from '~/models/process';
+import { getWorkflow, getWorkflowInputs } from "~/models/workflow";
export const loadProcess = (containerRequestUuid: string) =>
async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository): Promise<Process> => {
- const response = await services.workflowService.list();
- dispatch(runProcessPanelActions.SET_WORKFLOWS(response.items));
const containerRequest = await services.containerRequestService.get(containerRequestUuid);
dispatch<any>(updateResources([containerRequest]));
+
if (containerRequest.containerUuid) {
const container = await services.containerService.get(containerRequest.containerUuid);
dispatch<any>(updateResources([container]));
- await dispatch<any>(loadSubprocesses(containerRequest.containerUuid));
return { containerRequest, container };
}
return { containerRequest };
};
-export const loadSubprocesses = (containerUuid: string) =>
- async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
- const containerRequests = await dispatch<any>(loadContainerRequests(
- new FilterBuilder().addEqual('requestingContainerUuid', containerUuid).getFilters()
- )) as ContainerRequestResource[];
-
- const containerUuids: string[] = containerRequests.reduce((uuids, { containerUuid }) =>
- containerUuid
- ? [...uuids, containerUuid]
- : uuids, []);
-
- if (containerUuids.length > 0) {
- await dispatch<any>(loadContainers(
- new FilterBuilder().addIn('uuid', containerUuids).getFilters()
- ));
- }
- };
-
-export const loadContainerRequests = (filters: string) =>
+export const loadContainers = (filters: string) =>
async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
- const { items } = await services.containerRequestService.list({ filters });
+ const { items } = await services.containerService.list({ filters });
dispatch<any>(updateResources(items));
return items;
};
-export const loadContainers = (filters: string) =>
+export const cancelRunningWorkflow = (uuid: string) =>
async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
- const { items } = await services.containerService.list({ filters });
- dispatch<any>(updateResources(items));
- return items;
+ try {
+ const process = await services.containerRequestService.update(uuid, { priority: 0 });
+ return process;
+ } catch (e) {
+ throw new Error('Could not cancel the process.');
+ }
};
export const reRunProcess = (processUuid: string, workflowUuid: string) =>
const workflows = getState().runProcessPanel.searchWorkflows;
const workflow = workflows.find(workflow => workflow.uuid === workflowUuid);
if (workflow && process) {
- const newValues = getInputs(process);
- process.mounts.varLibCwlWorkflowJson.content.graph[1].inputs = newValues;
- const stringifiedDefinition = JSON.stringify(process.mounts.varLibCwlWorkflowJson.content);
+ const mainWf = getWorkflow(process.mounts[MOUNT_PATH_CWL_WORKFLOW]);
+ if (mainWf) { mainWf.inputs = getInputs(process); }
+ const stringifiedDefinition = JSON.stringify(process.mounts[MOUNT_PATH_CWL_WORKFLOW].content);
const newWorkflow = { ...workflow, definition: stringifiedDefinition };
const basicInitialData: RunProcessBasicFormData = { name: `Copy of: ${process.name}`, description: process.description };
dispatch<any>(initialize(RUN_PROCESS_BASIC_FORM, basicInitialData));
- const advancedInitialData: RunProcessAdvancedFormData = {
- output: process.outputName,
- runtime: process.schedulingParameters.maxRunTime,
+ const advancedInitialData: RunProcessAdvancedFormData = {
+ output: process.outputName,
+ runtime: process.schedulingParameters.max_run_time,
ram: process.runtimeConstraints.ram,
vcpus: process.runtimeConstraints.vcpus,
- keepCacheRam: process.runtimeConstraints.keepCacheRam,
- api: process.runtimeConstraints.API
- };
-
dispatch<any>(initialize(RUN_PROCESS_ADVANCED_FORM, advancedInitialData));
+ keep_cache_ram: process.runtimeConstraints.keep_cache_ram,
+ acr_container_image: process.containerImage
+ };
+ dispatch<any>(initialize(RUN_PROCESS_ADVANCED_FORM, advancedInitialData));
dispatch<any>(navigateToRunProcess);
dispatch<any>(goToStep(1));
}
};
-const getInputs = (data: any) =>
- data && data.mounts.varLibCwlWorkflowJson ? data.mounts.varLibCwlWorkflowJson.content.graph[1].inputs.map((it: any) => (
- { type: it.type, id: it.id, label: it.label, default: getInputValue(it.id, data.mounts.varLibCwlCwlInputJson.content), doc: it.doc }
- )) : [];
+const getInputs = (data: any) => {
+ if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { return []; }
+ const inputs = getWorkflowInputs(data.mounts[MOUNT_PATH_CWL_WORKFLOW].content);
+ return inputs ? inputs.map(
+ (it: any) => (
+ {
+ type: it.type,
+ id: it.id,
+ label: it.label,
+ default: data.mounts[MOUNT_PATH_CWL_INPUT].content[it.id],
+ doc: it.doc
+ }
+ )
+ ) : [];
+};
export const openRemoveProcessDialog = (uuid: string) =>
(dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
dispatch(projectPanelActions.REQUEST_ITEMS());
dispatch(snackbarActions.OPEN_SNACKBAR({ message: 'Removed.', hideDuration: 2000, kind: SnackbarKind.SUCCESS }));
};
-
-
projects / arvados-workbench2.git / blobdiff