cleanup() {
set -x
+ set +e +o pipefail
kill ${arvboot_PID} ${consume_stdout_PID} ${wb2_PID} ${consume_wb2_stdout_PID}
wait ${arvboot_PID} ${consume_stdout_PID} ${wb2_PID} ${consume_wb2_stdout_PID} || true
- if [ "${CLEANUP_ARVADOS_DIR}" -eq "1" ]; then
+ if [ ${CLEANUP_ARVADOS_DIR} -eq 1 ]; then
rm -rf ${ARVADOS_DIR}
fi
echo >&2 "done"
# Allow self-signed certs on 'wait-on'
export NODE_TLS_REJECT_UNAUTHORIZED=0
+ARVADOS_DIR="unset"
CLEANUP_ARVADOS_DIR=0
CYPRESS_MODE="run"
-ARVADOS_DIR=`mktemp -d`
WB2_DIR=`pwd`
while getopts "ia:w:" o; do
done
shift $((OPTIND-1))
+if [ "${ARVADOS_DIR}" = "unset" ]; then
+ echo "ARVADOS_DIR is unset, creating a temporary directory for new checkout"
+ ARVADOS_DIR=`mktemp -d`
+fi
+
+echo "ARVADOS_DIR is ${ARVADOS_DIR}"
+
ARVADOS_LOG=${ARVADOS_DIR}/arvados.log
ARVADOS_CONF=${WB2_DIR}/tools/arvados_config.yml
+VOCABULARY_CONF=${WB2_DIR}/tools/example-vocabulary.json
if [ ! -f "${WB2_DIR}/src/index.tsx" ]; then
echo "ERROR: '${WB2_DIR}' isn't workbench2's directory"
fi
if [ -f "${WB2_DIR}/public/config.json" ]; then
- echo "ERROR: Cannot run with Workbench2's public/config.json file"
+ echo "ERROR: Please move public/config.json file out of the way"
exit 1
fi
~/go/bin/arvados-server install -type test || exit 1
echo "Launching arvados in test mode..."
+TMPSUBDIR=$(mktemp -d -p /tmp | cut -d \/ -f3) # Removes the /tmp/ part for the regex below
+TMPDIR=/tmp/${TMPSUBDIR}
+cp ${VOCABULARY_CONF} ${TMPDIR}/voc.json
+cp ${ARVADOS_CONF} ${TMPDIR}/arvados.yml
+sed -i "s/VocabularyPath: \".*\"/VocabularyPath: \"\/tmp\/${TMPSUBDIR}\/voc.json\"/" ${TMPDIR}/arvados.yml
coproc arvboot (~/go/bin/arvados-server boot \
-type test \
- -config ${ARVADOS_CONF} \
+ -config ${TMPDIR}/arvados.yml \
+ -no-workbench1 \
+ -no-workbench2 \
-own-temporary-database \
-timeout 20m 2> ${ARVADOS_LOG})
trap cleanup ERR EXIT
-read controllerURL <&"${arvboot[0]}" || exit 1
+read controllerInfo <&"${arvboot[0]}" || exit 1
+controllerURL=`echo "$controllerInfo" | awk '{print $1;}'`;
echo "Arvados up and running at ${controllerURL}"
IFS='/' ; read -ra controllerHostPort <<< "${controllerURL}" ; unset IFS
controllerHostPort=${controllerHostPort[2]}