return { containerRequest };
};
-export const loadContainers = (filters: string) =>
+export const loadContainers = (filters: string, loadMounts: boolean = true) =>
async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
- const { items } = await services.containerService.list({ filters });
+ let args: any = { filters };
+ if (!loadMounts) {
+ args.select = containerFieldsNoMounts;
+ }
+ const { items } = await services.containerService.list(args);
dispatch<any>(updateResources(items));
return items;
};
+// Until the api supports unselecting fields, we need a list of all other fields to omit mounts
+const containerFieldsNoMounts = [
+ "auth_uuid",
+ "command",
+ "container_image",
+ "created_at",
+ "cwd",
+ "environment",
+ "etag",
+ "exit_code",
+ "finished_at",
+ "gateway_address",
+ "href",
+ "interactive_session_started",
+ "kind",
+ "lock_count",
+ "locked_by_uuid",
+ "log",
+ "modified_at",
+ "modified_by_client_uuid",
+ "modified_by_user_uuid",
+ "output_path",
+ "output_properties",
+ "output_storage_classes",
+ "output",
+ "owner_uuid",
+ "priority",
+ "progress",
+ "runtime_auth_scopes",
+ "runtime_constraints",
+ "runtime_status",
+ "runtime_user_uuid",
+ "scheduling_parameters",
+ "started_at",
+ "state",
+ "uuid",
+]
+
export const cancelRunningWorkflow = (uuid: string) =>
async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => {
try {
}
};
+/*
+ * Fetches raw inputs from containerRequest mounts with fallback to properties
+ */
+export const getRawInputs = (data: any): CommandInputParameter[] | undefined => {
+ if (!data) { return undefined; }
+ const mountInput = data.mounts?.[MOUNT_PATH_CWL_INPUT]?.content;
+ const propsInput = data.properties?.cwl_input;
+ if (!mountInput && !propsInput) { return undefined; }
+ return (mountInput || propsInput);
+}
+
export const getInputs = (data: any): CommandInputParameter[] => {
if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { return []; }
+ const content = getRawInputs(data) as any;
+ if (!content) { return []; }
+
const inputs = getWorkflowInputs(data.mounts[MOUNT_PATH_CWL_WORKFLOW].content);
return inputs ? inputs.map(
(it: any) => (
type: it.type,
id: it.id,
label: it.label,
- default: data.mounts[MOUNT_PATH_CWL_INPUT].content[it.id],
- value: data.mounts[MOUNT_PATH_CWL_INPUT].content[it.id.split('/').pop()] || [],
+ default: content[it.id],
+ value: content[it.id.split('/').pop()] || [],
doc: it.doc
}
)
) : [];
};
+/*
+ * Fetches raw outputs from containerRequest properties
+ */
+export const getRawOutputs = (data: any): CommandInputParameter[] | undefined => {
+ if (!data || !data.properties || !data.properties.cwl_output) { return undefined; }
+ return (data.properties.cwl_output);
+}
+
export type InputCollectionMount = {
path: string;
pdh: string;