From f0e6dee38defddfb2bf9e9b3177372fc038912fc Mon Sep 17 00:00:00 2001 From: Sarah Wait Zaranek Date: Thu, 27 Feb 2020 18:56:16 +0000 Subject: [PATCH] Rearranging Folders Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek no issue # --- {annotation => src/annotation}/new/generatereport.py | 0 {annotation => src/annotation}/new/runcommand | 0 {annotation => src/annotation}/new/tail.html | 0 {annotation => src/annotation}/new/test.html | 0 {cwl/testyml => yml}/bwa-gatk-wf-WGC071838D.yml | 0 {cwl/testyml => yml}/bwa-gatk-wf-WGC074701D.yml | 0 {cwl/testyml => yml}/bwa-gatk-wf-chr19.yml | 0 {cwl/testyml => yml}/bwa-gatk-wf.yml | 0 {cwl/testyml => yml}/bwamem-samtools-view.yml | 0 {cwl/testyml => yml}/gatk-haplotypecaller.yml | 0 {cwl/testyml => yml}/samtools-index.yml | 0 {cwl/testyml => yml}/samtools-sort-WGC069888D.yml | 0 12 files changed, 0 insertions(+), 0 deletions(-) rename {annotation => src/annotation}/new/generatereport.py (100%) rename {annotation => src/annotation}/new/runcommand (100%) rename {annotation => src/annotation}/new/tail.html (100%) rename {annotation => src/annotation}/new/test.html (100%) rename {cwl/testyml => yml}/bwa-gatk-wf-WGC071838D.yml (100%) rename {cwl/testyml => yml}/bwa-gatk-wf-WGC074701D.yml (100%) rename {cwl/testyml => yml}/bwa-gatk-wf-chr19.yml (100%) rename {cwl/testyml => yml}/bwa-gatk-wf.yml (100%) rename {cwl/testyml => yml}/bwamem-samtools-view.yml (100%) rename {cwl/testyml => yml}/gatk-haplotypecaller.yml (100%) rename {cwl/testyml => yml}/samtools-index.yml (100%) rename {cwl/testyml => yml}/samtools-sort-WGC069888D.yml (100%) diff --git a/annotation/new/generatereport.py b/src/annotation/new/generatereport.py similarity index 100% rename from annotation/new/generatereport.py rename to src/annotation/new/generatereport.py diff --git a/annotation/new/runcommand b/src/annotation/new/runcommand similarity index 100% rename from annotation/new/runcommand rename to src/annotation/new/runcommand diff --git a/annotation/new/tail.html b/src/annotation/new/tail.html similarity index 100% rename from annotation/new/tail.html rename to src/annotation/new/tail.html diff --git a/annotation/new/test.html b/src/annotation/new/test.html similarity index 100% rename from annotation/new/test.html rename to src/annotation/new/test.html diff --git a/cwl/testyml/bwa-gatk-wf-WGC071838D.yml b/yml/bwa-gatk-wf-WGC071838D.yml similarity index 100% rename from cwl/testyml/bwa-gatk-wf-WGC071838D.yml rename to yml/bwa-gatk-wf-WGC071838D.yml diff --git a/cwl/testyml/bwa-gatk-wf-WGC074701D.yml b/yml/bwa-gatk-wf-WGC074701D.yml similarity index 100% rename from cwl/testyml/bwa-gatk-wf-WGC074701D.yml rename to yml/bwa-gatk-wf-WGC074701D.yml diff --git a/cwl/testyml/bwa-gatk-wf-chr19.yml b/yml/bwa-gatk-wf-chr19.yml similarity index 100% rename from cwl/testyml/bwa-gatk-wf-chr19.yml rename to yml/bwa-gatk-wf-chr19.yml diff --git a/cwl/testyml/bwa-gatk-wf.yml b/yml/bwa-gatk-wf.yml similarity index 100% rename from cwl/testyml/bwa-gatk-wf.yml rename to yml/bwa-gatk-wf.yml diff --git a/cwl/testyml/bwamem-samtools-view.yml b/yml/bwamem-samtools-view.yml similarity index 100% rename from cwl/testyml/bwamem-samtools-view.yml rename to yml/bwamem-samtools-view.yml diff --git a/cwl/testyml/gatk-haplotypecaller.yml b/yml/gatk-haplotypecaller.yml similarity index 100% rename from cwl/testyml/gatk-haplotypecaller.yml rename to yml/gatk-haplotypecaller.yml diff --git a/cwl/testyml/samtools-index.yml b/yml/samtools-index.yml similarity index 100% rename from cwl/testyml/samtools-index.yml rename to yml/samtools-index.yml diff --git a/cwl/testyml/samtools-sort-WGC069888D.yml b/yml/samtools-sort-WGC069888D.yml similarity index 100% rename from cwl/testyml/samtools-sort-WGC069888D.yml rename to yml/samtools-sort-WGC069888D.yml -- 2.30.2